RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', human

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPA1-208	ENST00000559686	GDPD5	Q8WTR4	605 aa		10.82	□□□□□ -0.68
SNRPA1-208	ENST00000559686	AGBL1	Q96MI9	1066 aa		10.82	□□□□□ -0.68
SNRPA1-208	ENST00000559686	PHOX2B	Q99453	314 aa		10.82	□□□□□ -0.68
SNRPA1-208	ENST00000559686	TNN	Q9UQP3	1299 aa		10.82	□□□□□ -0.68
SNRPA1-208	ENST00000559686	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.82	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ASTN1	O14525	1302 aa		10.82	□□□□□ -0.68
SNRPA1-208	ENST00000559686	RBAK-RBAKDN	I3L0D1	243 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	DYNC1LI2	O43237	492 aa	Predicted RBP	10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	SURF6	O75683	361 aa	Known RBP	10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	IL9	P15248	144 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	KCNA5	P22460	613 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	SLFN5	Q08AF3	891 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	FSCN1	Q16658	493 aa	Known RBP	10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	TLK2	Q86UE8	772 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	CCDC144CP	Q8IYA2	1237 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	STK11IP	Q8N1F8	1099 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	LCORL	Q8N3X6	602 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	SLC43A3	Q8NBI5	491 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	FGD4	Q96M96	766 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	TEX13B	Q9BXU2	312 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	AP5M1	Q9H0R1	490 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	BCL11A	Q9H165	835 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	RAVER2	Q9HCJ3	691 aa	Known RBP	10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	GOPC	Q9HD26	462 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	GPR108	Q9NPR9	543 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	HOMER2	Q9NSB8	354 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	PTPRS	Q13332	1948 aa		10.81	□□□□□ -0.68
SNRPA1-208	ENST00000559686	LCHN	A4D1U4	455 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ANP32C	O43423	234 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	BCAR3	O75815	825 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ACTN1	P12814	892 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	CNTN2	Q02246	1040 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	FAM47C	Q5HY64	1035 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	TMEM63B	Q5T3F8	832 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	EEPD1	Q7L9B9	569 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	HERC6	Q8IVU3	1022 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	FAM178B	Q8IXR5	827 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	KIFC2	Q96AC6	838 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	SLF1	Q9BQI6	1058 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	UBE2Z	Q9H832	354 aa	Predicted RBP	10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ARMT1	Q9H993	441 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	TRMT13	Q9NUP7	481 aa	Known RBP	10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	SWAP70	Q9UH65	585 aa		10.8	□□□□□ -0.68
SNRPA1-208	ENST00000559686	USP34	Q70CQ2	3546 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	KIF28P	B7ZC32	967 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	PRKAB2	O43741	272 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	LPXN	O60711	386 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	CDK8	P49336	464 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	SLFNL1	Q499Z3	407 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	SLC9C2	Q5TAH2	1124 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	CLUAP1	Q96AJ1	413 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	CHMP4C	Q96CF2	233 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	EAF2	Q96CJ1	260 aa	Predicted RBP	10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	SLC9A7	Q96T83	725 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	KATNBL1	Q9H079	304 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	OCEL1	Q9H607	264 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	C1orf115	Q9H7X2	142 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	PDGFC	Q9NRA1	345 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ZNF536	O15090	1300 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ZNF532	Q9HCE3	1301 aa		10.79	□□□□□ -0.68
SNRPA1-208	ENST00000559686	PIEZO1	Q92508	2521 aa		10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ZBED4	O75132	1171 aa		10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	CABYR	O75952	493 aa		10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	CHRM1	P11229	460 aa	Predicted RBP	10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ALAD	P13716	330 aa		10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	PDE6A	P16499	860 aa		10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	CHMP4BP1	P59074	171 aa		10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	EP400NL	Q6ZTU2	488 aa		10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ZBED2	Q9BTP6	218 aa		10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ISY1	Q9ULR0	285 aa	Known RBP	10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	TANC1	Q9C0D5	1861 aa		10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	TNKS	O95271	1327 aa		10.78	□□□□□ -0.68
SNRPA1-208	ENST00000559686	C5orf42	Q9H799	3197 aa		10.77	□□□□□ -0.68
SNRPA1-208	ENST00000559686	ZEB2	O60315	1214 aa		10.77	□□□□□ -0.69
SNRPA1-208	ENST00000559686	IGSF3	O75054	1194 aa		10.77	□□□□□ -0.69
SNRPA1-208	ENST00000559686	PFKM	P08237	780 aa		10.77	□□□□□ -0.69
SNRPA1-208	ENST00000559686	MYL3	P08590	195 aa		10.77	□□□□□ -0.69
SNRPA1-208	ENST00000559686	SMPD1	P17405	629 aa		10.77	□□□□□ -0.69
SNRPA1-208	ENST00000559686	FBXO16	Q8IX29	292 aa	Predicted RBP	10.77	□□□□□ -0.69
SNRPA1-208	ENST00000559686	CCDC17	Q96LX7	622 aa		10.77	□□□□□ -0.69
SNRPA1-208	ENST00000559686	DNAJC2	Q99543	621 aa	Known RBP	10.77	□□□□□ -0.69
SNRPA1-208	ENST00000559686	KANSL2	Q9H9L4	492 aa		10.77	□□□□□ -0.69
SNRPA1-208	ENST00000559686	GNE	Q9Y223	722 aa	Known RBP	10.77	□□□□□ -0.69
SNRPA1-208	ENST00000559686	SOWAHB	A6NEL2	793 aa		10.76	□□□□□ -0.69
SNRPA1-208	ENST00000559686	USP17L12	C9JPN9	530 aa		10.76	□□□□□ -0.69
SNRPA1-208	ENST00000559686	USP17L21	D6R901	530 aa		10.76	□□□□□ -0.69
SNRPA1-208	ENST00000559686		H3BQ06	376 aa	Predicted RBP	10.76	□□□□□ -0.69
SNRPA1-208	ENST00000559686	DCX	O43602	365 aa		10.76	□□□□□ -0.69
SNRPA1-208	ENST00000559686	MBD4	O95243	580 aa		10.76	□□□□□ -0.69
SNRPA1-208	ENST00000559686	NDUFB10	O96000	172 aa		10.76	□□□□□ -0.69
SNRPA1-208	ENST00000559686	KCNJ6	P48051	423 aa		10.76	□□□□□ -0.69
SNRPA1-208	ENST00000559686	LEXM	Q3ZCV2	418 aa		10.76	□□□□□ -0.69
SNRPA1-208	ENST00000559686	FAM117B	Q6P1L5	589 aa		10.76	□□□□□ -0.69

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