RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SOWAHBA6NEL2 793 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 KBTBD13C9JR72 458 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 ADCY6O43306 1168 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 NEFLP07196 543 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 PARP1P09874 1014 aaKnown RBP12.8□□□□□ -0.36
SPG11-216ENST00000559347 RARBP10826 455 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 ANTXR2P58335 489 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 CDC37Q16543 378 aaPredicted RBP12.8□□□□□ -0.36
SPG11-216ENST00000559347 LRRC26Q2I0M4 334 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 GJC2Q5T442 439 aaPredicted RBP12.8□□□□□ -0.36
SPG11-216ENST00000559347 KIAA1211Q6ZU35 1233 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 ARRDC4Q8NCT1 418 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 UBA5Q9GZZ9 404 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 KATNBL1Q9H079 304 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 ANO2Q9NQ90 1003 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 XPNPEP3Q9NQH7 507 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 PNMA2Q9UL42 364 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 LAMA3Q16787 3333 aa12.8□□□□□ -0.36
SPG11-216ENST00000559347 LAMA2P24043 3122 aaKnown RBP12.79□□□□□ -0.36
SPG11-216ENST00000559347 IFIT3O14879 490 aaKnown RBP12.79□□□□□ -0.36
SPG11-216ENST00000559347 CDC45O75419 566 aa12.79□□□□□ -0.36
SPG11-216ENST00000559347 ACVR2BQ13705 512 aa12.79□□□□□ -0.36
SPG11-216ENST00000559347 LRRC41Q15345 812 aa12.79□□□□□ -0.36
SPG11-216ENST00000559347 SLC30A10Q6XR72 485 aa12.79□□□□□ -0.36
SPG11-216ENST00000559347 ADGRF4Q8IZF3 695 aa12.79□□□□□ -0.36
SPG11-216ENST00000559347 STAG2Q8N3U4 1231 aa12.79□□□□□ -0.36
SPG11-216ENST00000559347 CLEC4DQ8WXI8 215 aa12.79□□□□□ -0.36
SPG11-216ENST00000559347 SENP6Q9GZR1 1112 aaPredicted RBP12.79□□□□□ -0.36
SPG11-216ENST00000559347 ABHD16BQ9H3Z7 469 aa12.79□□□□□ -0.36
SPG11-216ENST00000559347 SENP2Q9HC62 589 aa12.79□□□□□ -0.36
SPG11-216ENST00000559347 SYNRGQ9UMZ2 1314 aa12.79□□□□□ -0.36
SPG11-216ENST00000559347 BAZ2BQ9UIF8 2168 aaKnown RBP12.79□□□□□ -0.36
SPG11-216ENST00000559347 TRIOBPQ9H2D6 2365 aa12.78□□□□□ -0.36
SPG11-216ENST00000559347 ERICH2A1L162 156 aa12.78□□□□□ -0.36
SPG11-216ENST00000559347 SLC27A2O14975 620 aa12.78□□□□□ -0.36
SPG11-216ENST00000559347 ADAMTS4O75173 837 aa12.78□□□□□ -0.36
SPG11-216ENST00000559347 WTAPQ15007 396 aa12.78□□□□□ -0.36
SPG11-216ENST00000559347 SART3Q15020 963 aaKnown RBP12.78□□□□□ -0.36
SPG11-216ENST00000559347 USH1GQ495M9 461 aa12.78□□□□□ -0.36
SPG11-216ENST00000559347 CHST3Q7LGC8 479 aa12.78□□□□□ -0.36
SPG11-216ENST00000559347 PURBQ96QR8 312 aaKnown RBP12.78□□□□□ -0.36
SPG11-216ENST00000559347 MAD2L2Q9UI95 211 aa12.78□□□□□ -0.36
SPG11-216ENST00000559347 FAM184BQ9ULE4 1060 aa12.78□□□□□ -0.36
SPG11-216ENST00000559347 COLQQ9Y215 455 aaPredicted RBP12.78□□□□□ -0.36
SPG11-216ENST00000559347 DDX49Q9Y6V7 483 aaKnown RBP12.78□□□□□ -0.36
SPG11-216ENST00000559347 PTPDC1A2A3K4 754 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 ASB14A6NK59 587 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 DHX16O60231 1041 aaKnown RBP12.77□□□□□ -0.37
SPG11-216ENST00000559347 PGK1P00558 417 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 ALDH5A1P51649 535 aaPredicted RBP12.77□□□□□ -0.37
SPG11-216ENST00000559347 BAATQ14032 418 aaPredicted RBP12.77□□□□□ -0.37
SPG11-216ENST00000559347 COL9A3Q14050 684 aaPredicted RBP12.77□□□□□ -0.37
SPG11-216ENST00000559347 GRM4Q14833 912 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 NECTIN1Q15223 517 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 QRICH1Q2TAL8 776 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 CCDC144BQ3MJ40 725 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 TMEM67Q5HYA8 995 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 HABP4Q5JVS0 413 aaKnown RBP12.77□□□□□ -0.37
SPG11-216ENST00000559347 CREB3L3Q68CJ9 461 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 CASC1Q6TDU7 716 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 MORC4Q8TE76 937 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 PRO3102Q9H379 93 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 JMJD4Q9H9V9 463 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 ABCB11O95342 1321 aa12.77□□□□□ -0.37
SPG11-216ENST00000559347 SZT2Q5T011 3432 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 LOC102724159A0A0B4J2E5 919 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
SPG11-216ENST00000559347 KLRF2D3W0D1 207 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 PRC1O43663 620 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 DUSP11O75319 330 aaKnown RBP12.76□□□□□ -0.37
SPG11-216ENST00000559347 CST5P28325 142 aaPredicted RBP12.76□□□□□ -0.37
SPG11-216ENST00000559347 ATN1P54259 1190 aaPredicted RBP12.76□□□□□ -0.37
SPG11-216ENST00000559347 RPS6P62753 249 aaKnown RBP12.76□□□□□ -0.37
SPG11-216ENST00000559347 TROAPQ12815 778 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 SNX17Q15036 470 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 PWP2Q15269 919 aaKnown RBP12.76□□□□□ -0.37
SPG11-216ENST00000559347 SLC35G1Q2M3R5 365 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 RNF207Q6ZRF8 634 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 RNF180Q86T96 592 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 FBXO16Q8IX29 292 aaPredicted RBP12.76□□□□□ -0.37
SPG11-216ENST00000559347 IGDCC4Q8TDY8 1250 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 MTMR8Q96EF0 704 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 MTA3Q9BTC8 594 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 LY9Q9HBG7 655 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 ADD3Q9UEY8 706 aaKnown RBP12.76□□□□□ -0.37
SPG11-216ENST00000559347 ZMYND8Q9ULU4 1186 aaPredicted RBP12.76□□□□□ -0.37
SPG11-216ENST00000559347 PHF24Q9UPV7 400 aa12.76□□□□□ -0.37
SPG11-216ENST00000559347 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.75□□□□□ -0.37
SPG11-216ENST00000559347 A0A1W2PQ45 241 aaPredicted RBP12.75□□□□□ -0.37
SPG11-216ENST00000559347 A0A1W2PQY0 241 aa12.75□□□□□ -0.37
SPG11-216ENST00000559347 MYADML2A6NDP7 307 aa12.75□□□□□ -0.37
SPG11-216ENST00000559347 SH2B2O14492 632 aaPredicted RBP12.75□□□□□ -0.37
SPG11-216ENST00000559347 SYN1P17600 705 aa12.75□□□□□ -0.37
SPG11-216ENST00000559347 CALML3P27482 149 aa12.75□□□□□ -0.37
SPG11-216ENST00000559347 ADCYAP1R1P41586 468 aa12.75□□□□□ -0.37
SPG11-216ENST00000559347 RTP1P59025 263 aa12.75□□□□□ -0.37
SPG11-216ENST00000559347 FBXO11Q86XK2 927 aa12.75□□□□□ -0.37
SPG11-216ENST00000559347 UPF3AQ9H1J1 476 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms