RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 CORINQ9Y5Q5 1042 aa6.93□□□□□ -1.3
CASC4-207ENST00000559037 OAS3Q9Y6K5 1087 aaKnown RBP6.93□□□□□ -1.3
CASC4-207ENST00000559037 PIK3C2AO00443 1686 aa6.93□□□□□ -1.3
CASC4-207ENST00000559037 LMO7Q8WWI1 1683 aa6.93□□□□□ -1.3
CASC4-207ENST00000559037 CAMTA1Q9Y6Y1 1673 aa6.93□□□□□ -1.3
CASC4-207ENST00000559037 TONSLQ96HA7 1378 aa6.93□□□□□ -1.3
CASC4-207ENST00000559037 SBNO2Q9Y2G9 1366 aa6.93□□□□□ -1.3
CASC4-207ENST00000559037 USP6P35125 1406 aa6.93□□□□□ -1.3
CASC4-207ENST00000559037 CPSF1Q10570 1443 aaKnown RBP6.93□□□□□ -1.3
CASC4-207ENST00000559037 NRKQ7Z2Y5 1582 aa6.92□□□□□ -1.3
CASC4-207ENST00000559037 FAM155AB1AL88 458 aaPredicted RBP6.92□□□□□ -1.3
CASC4-207ENST00000559037 GCP02774 474 aa6.92□□□□□ -1.3
CASC4-207ENST00000559037 CHRNA2Q15822 529 aa6.92□□□□□ -1.3
CASC4-207ENST00000559037 NKPD1Q17RQ9 610 aa6.92□□□□□ -1.3
CASC4-207ENST00000559037 LRRFIP1Q32MZ4 808 aaKnown RBP6.92□□□□□ -1.3
CASC4-207ENST00000559037 ANGEL2Q5VTE6 544 aaKnown RBP6.92□□□□□ -1.3
CASC4-207ENST00000559037 NFXL1Q6ZNB6 911 aa6.92□□□□□ -1.3
CASC4-207ENST00000559037 THAP5Q7Z6K1 395 aa6.92□□□□□ -1.3
CASC4-207ENST00000559037 SLITRK4Q8IW52 837 aa6.92□□□□□ -1.3
CASC4-207ENST00000559037 FBXO27Q8NI29 283 aa6.92□□□□□ -1.3
CASC4-207ENST00000559037 GMIPQ9P107 970 aa6.92□□□□□ -1.3
CASC4-207ENST00000559037 THSD7AQ9UPZ6 1657 aa6.92□□□□□ -1.3
CASC4-207ENST00000559037 CPDO75976 1380 aa6.92□□□□□ -1.3
CASC4-207ENST00000559037 LTN1O94822 1766 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 IMPDH2P12268 514 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 AOC3Q16853 763 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 KRT27Q7Z3Y8 459 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 DNAJB8Q8NHS0 232 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 XAGE3Q8WTP9 111 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 CCDC74BQ96LY2 380 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 PUS7Q96PZ0 661 aaKnown RBP6.91□□□□□ -1.3
CASC4-207ENST00000559037 TESK2Q96S53 571 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 DPH2Q9BQC3 489 aaPredicted RBP6.91□□□□□ -1.3
CASC4-207ENST00000559037 CAPN6Q9Y6Q1 641 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 U3KQE9 123 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 SPATA31A1Q5TZJ5 1347 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 TTC21BQ7Z4L5 1316 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 SLIT3O75094 1523 aa6.91□□□□□ -1.3
CASC4-207ENST00000559037 USP54Q70EL1 1684 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 TLR3O15455 904 aaKnown RBP6.9□□□□□ -1.3
CASC4-207ENST00000559037 GRIN3BO60391 1043 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 FUT4P22083 530 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 CCNFP41002 786 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 ZNF654Q8IZM8 581 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 ABI1Q8IZP0 508 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 RNF141Q8WVD5 230 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 NKD1Q969G9 470 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 ASPNQ9BXN1 380 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 BRMS1Q9HCU9 246 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 LMCD1Q9NZU5 365 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 DDX41Q9UJV9 622 aaKnown RBP6.9□□□□□ -1.3
CASC4-207ENST00000559037 PCDHB14Q9Y5E9 798 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 PITPNM2Q9BZ72 1349 aa6.9□□□□□ -1.3
CASC4-207ENST00000559037 CD163L1Q9NR16 1453 aa6.9□□□□□ -1.31
CASC4-207ENST00000559037 RGPD1P0DJD0 1748 aa6.9□□□□□ -1.31
CASC4-207ENST00000559037 ST20-MTHFSA0A0A6YYL1 179 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 CRKP46108 304 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 EVA1CP58658 441 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 RAD51AP2Q09MP3 1159 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 COL9A2Q14055 689 aaPredicted RBP6.89□□□□□ -1.31
CASC4-207ENST00000559037 SEZ6Q53EL9 994 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 MCTP1Q6DN14 999 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 CBLL1Q75N03 491 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 CDH24Q86UP0 819 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 RIN3Q8TB24 985 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 SLC12A5Q9H2X9 1139 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 UBP1Q9NZI7 540 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 KLHL3Q9UH77 587 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 ADGRE2Q9UHX3 823 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 KCNH3Q9ULD8 1083 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 TTC21AQ8NDW8 1320 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 AATKQ6ZMQ8 1374 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 BLMP54132 1417 aaPredicted RBP6.89□□□□□ -1.31
CASC4-207ENST00000559037 PARP4Q9UKK3 1724 aaKnown RBP6.89□□□□□ -1.31
CASC4-207ENST00000559037 WNK3Q9BYP7 1800 aa6.89□□□□□ -1.31
CASC4-207ENST00000559037 MAP2P11137 1827 aaKnown RBP6.88□□□□□ -1.31
CASC4-207ENST00000559037 RGPD2P0DJD1 1756 aa6.88□□□□□ -1.31
CASC4-207ENST00000559037 KTN1Q86UP2 1357 aaKnown RBP6.88□□□□□ -1.31
CASC4-207ENST00000559037 MEIS3P2A8K0S8 358 aa6.88□□□□□ -1.31
CASC4-207ENST00000559037 CD8BP10966 210 aa6.88□□□□□ -1.31
CASC4-207ENST00000559037 TNNI2P48788 182 aa6.88□□□□□ -1.31
CASC4-207ENST00000559037 CHMP4BP1P59074 171 aa6.88□□□□□ -1.31
CASC4-207ENST00000559037 PLCL1Q15111 1095 aa6.88□□□□□ -1.31
CASC4-207ENST00000559037 CDCP2Q5VXM1 449 aa6.88□□□□□ -1.31
CASC4-207ENST00000559037 SPRED2Q7Z698 418 aa6.88□□□□□ -1.31
CASC4-207ENST00000559037 ARHGEF25Q86VW2 580 aa6.88□□□□□ -1.31
CASC4-207ENST00000559037 PHACTR4Q8IZ21 702 aa6.88□□□□□ -1.31
CASC4-207ENST00000559037 PPP1R13LQ8WUF5 828 aa6.88□□□□□ -1.31
CASC4-207ENST00000559037 TRIT1Q9H3H1 467 aaKnown RBP6.88□□□□□ -1.31
CASC4-207ENST00000559037 ST14Q9Y5Y6 855 aa6.88□□□□□ -1.31
CASC4-207ENST00000559037 TNS1Q9HBL0 1735 aaKnown RBP6.87□□□□□ -1.31
CASC4-207ENST00000559037 COL5A2P05997 1499 aaPredicted RBP6.87□□□□□ -1.31
CASC4-207ENST00000559037 SLC22A31A6NKX4 558 aa6.87□□□□□ -1.31
CASC4-207ENST00000559037 RGS13O14921 159 aa6.87□□□□□ -1.31
CASC4-207ENST00000559037 RAG1P15918 1043 aa6.87□□□□□ -1.31
CASC4-207ENST00000559037 RNF4P78317 190 aa6.87□□□□□ -1.31
CASC4-207ENST00000559037 BNIP3Q12983 259 aa6.87□□□□□ -1.31
CASC4-207ENST00000559037 ZNF394Q53GI3 561 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms