RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 RING1Q06587 406 aa9.42□□□□□ -0.9
PCAT29-202ENST00000558941 MVPQ14764 893 aaKnown RBP9.42□□□□□ -0.9
PCAT29-202ENST00000558941 GPNMBQ14956 572 aa9.42□□□□□ -0.9
PCAT29-202ENST00000558941 VTI1AQ96AJ9 217 aa9.42□□□□□ -0.9
PCAT29-202ENST00000558941 CD207Q9UJ71 328 aa9.42□□□□□ -0.9
PCAT29-202ENST00000558941 NOB1Q9ULX3 412 aaKnown RBP9.42□□□□□ -0.9
PCAT29-202ENST00000558941 TEP1Q99973 2627 aaKnown RBP9.41□□□□□ -0.9
PCAT29-202ENST00000558941 MROH7-TTC4A0A0A0MT08 1334 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 ASTN1O14525 1302 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 USP17L15C9J2P7 530 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 USP17L13C9JLJ4 530 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 USP17L11C9JVI0 530 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 USP17L18D6R9N7 530 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 USP17L22D6RA61 530 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 USP17L17D6RBQ6 530 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 USP17L19D6RCP7 530 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 USP17L20D6RJB6 530 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 PGK2P07205 417 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 RHBDL3P58872 404 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 TIMM10P62072 90 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 GSTO1P78417 241 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 USP17L24Q0WX57 530 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 ITGA7Q13683 1181 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 RASGRF1Q13972 1273 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 ZNF792Q3KQV3 632 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 PPM1JQ5JR12 505 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 CXCL17Q6UXB2 119 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 ERICH6Q7L0X2 663 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 ABRAQ8N0Z2 381 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 PCSK9Q8NBP7 692 aaKnown RBP9.41□□□□□ -0.9
PCAT29-202ENST00000558941 SHCBP1Q8NEM2 672 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 HAUS7Q99871 368 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 HINFPQ9BQA5 517 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 SPATC1LQ9H0A9 340 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 SIL1Q9H173 461 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 SEMA4AQ9H3S1 761 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 MYO10Q9HD67 2058 aa9.41□□□□□ -0.9
PCAT29-202ENST00000558941 MICAL3Q7RTP6 2002 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 BRD1O95696 1058 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 SNAI1O95863 264 aaPredicted RBP9.4□□□□□ -0.9
PCAT29-202ENST00000558941 VCAM1P19320 739 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 PTGS1P23219 599 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 PMLP29590 882 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 RARSP54136 660 aaKnown RBP9.4□□□□□ -0.9
PCAT29-202ENST00000558941 RRP1P56182 461 aaKnown RBP9.4□□□□□ -0.9
PCAT29-202ENST00000558941 NKX3-2P78367 333 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 BEX3Q00994 111 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 ZYXQ15942 572 aaKnown RBP9.4□□□□□ -0.9
PCAT29-202ENST00000558941 SOWAHCQ53LP3 525 aaPredicted RBP9.4□□□□□ -0.9
PCAT29-202ENST00000558941 USP17L2Q6R6M4 530 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 METTL16Q86W50 562 aaKnown RBP9.4□□□□□ -0.9
PCAT29-202ENST00000558941 DZIP1Q86YF9 867 aaKnown RBP9.4□□□□□ -0.9
PCAT29-202ENST00000558941 CCDC105Q8IYK2 499 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 SUMF1Q8NBK3 374 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 SMRP1Q8NCR6 262 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 XAGE2Q96GT9 111 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 RAD9AQ99638 391 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 GINM1Q9NU53 330 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 TRMT13Q9NUP7 481 aaKnown RBP9.4□□□□□ -0.9
PCAT29-202ENST00000558941 CLEC1BQ9P126 229 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 ANGPTL2Q9UKU9 493 aa9.4□□□□□ -0.9
PCAT29-202ENST00000558941 PA2G4Q9UQ80 394 aaKnown RBP9.4□□□□□ -0.9
PCAT29-202ENST00000558941 TRIP12Q14669 1992 aaPredicted RBP9.4□□□□□ -0.9
PCAT29-202ENST00000558941 C1QTNF9BB2RNN3 333 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 H3BNC9 293 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 IPO8O15397 1037 aaKnown RBP9.39□□□□□ -0.91
PCAT29-202ENST00000558941 BAIAP3O94812 1187 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 GDF11O95390 407 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 ASNSP08243 561 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 C1QTNF9P0C862 333 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 ARID4AP29374 1257 aaPredicted RBP9.39□□□□□ -0.91
PCAT29-202ENST00000558941 ADORA1P30542 326 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 BTDP43251 543 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 PPP4CP60510 307 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 PSMC6P62333 389 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 MECOMQ03112 1051 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 MAPK8IP2Q13387 824 aaPredicted RBP9.39□□□□□ -0.91
PCAT29-202ENST00000558941 PTPROQ16827 1216 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 EPC2Q52LR7 807 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 GNASQ5JWF2 1037 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 ZNF384Q8TF68 577 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 NSUN4Q96CB9 384 aaKnown RBP9.39□□□□□ -0.91
PCAT29-202ENST00000558941 RPGRIP1Q96KN7 1286 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 MEIS3Q99687 375 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 HNRNPABQ99729 332 aaKnown RBP9.39□□□□□ -0.91
PCAT29-202ENST00000558941 RTKNQ9BST9 563 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 DHX36Q9H2U1 1008 aaKnown RBP9.39□□□□□ -0.91
PCAT29-202ENST00000558941 GPR108Q9NPR9 543 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 INCENPQ9NQS7 918 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 ABCF2Q9UG63 623 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 CTNNA3Q9UI47 895 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 HERC5Q9UII4 1024 aaKnown RBP9.39□□□□□ -0.91
PCAT29-202ENST00000558941 ZBTB21Q9ULJ3 1066 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 LHX6Q9UPM6 363 aa9.39□□□□□ -0.91
PCAT29-202ENST00000558941 FOCADQ5VW36 1801 aa9.38□□□□□ -0.91
PCAT29-202ENST00000558941 SRGAP3O43295 1099 aa9.38□□□□□ -0.91
PCAT29-202ENST00000558941 IQCF3P0C7M6 154 aa9.38□□□□□ -0.91
PCAT29-202ENST00000558941 UQCRFS1P1P0C7P4 283 aa9.38□□□□□ -0.91
PCAT29-202ENST00000558941 TGM1P22735 817 aa9.38□□□□□ -0.91
PCAT29-202ENST00000558941 CLCN5P51795 746 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms