RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 BAATQ14032 418 aaPredicted RBP13.98□□□□□ -0.17
HERC1-202ENST00000558324 SNX17Q15036 470 aa13.98□□□□□ -0.17
HERC1-202ENST00000558324 NOL8Q76FK4 1167 aaKnown RBP13.98□□□□□ -0.17
HERC1-202ENST00000558324 EEPD1Q7L9B9 569 aa13.98□□□□□ -0.17
HERC1-202ENST00000558324 DGKHQ86XP1 1220 aa13.98□□□□□ -0.17
HERC1-202ENST00000558324 ENAHQ8N8S7 591 aaPredicted RBP13.98□□□□□ -0.17
HERC1-202ENST00000558324 RUFY2Q8WXA3 655 aa13.98□□□□□ -0.17
HERC1-202ENST00000558324 UBAC1Q9BSL1 405 aa13.98□□□□□ -0.17
HERC1-202ENST00000558324 KRT23Q9C075 422 aa13.98□□□□□ -0.17
HERC1-202ENST00000558324 UBA5Q9GZZ9 404 aa13.98□□□□□ -0.17
HERC1-202ENST00000558324 ZSWIM5Q9P217 1185 aa13.98□□□□□ -0.17
HERC1-202ENST00000558324 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.97□□□□□ -0.17
HERC1-202ENST00000558324 PTPDC1A2A3K4 754 aa13.97□□□□□ -0.17
HERC1-202ENST00000558324 ASB14A6NK59 587 aa13.97□□□□□ -0.17
HERC1-202ENST00000558324 DUSP11O75319 330 aaKnown RBP13.97□□□□□ -0.17
HERC1-202ENST00000558324 ACLYP53396 1101 aa13.97□□□□□ -0.17
HERC1-202ENST00000558324 PTH1RQ03431 593 aa13.97□□□□□ -0.17
HERC1-202ENST00000558324 USH1GQ495M9 461 aa13.97□□□□□ -0.17
HERC1-202ENST00000558324 GPATCH4Q5T3I0 446 aaKnown RBP13.97□□□□□ -0.17
HERC1-202ENST00000558324 SLC30A10Q6XR72 485 aa13.97□□□□□ -0.17
HERC1-202ENST00000558324 FBXO16Q8IX29 292 aaPredicted RBP13.97□□□□□ -0.17
HERC1-202ENST00000558324 TDHQ8IZJ6 230 aa13.97□□□□□ -0.17
HERC1-202ENST00000558324 KATNBL1Q9H079 304 aa13.97□□□□□ -0.17
HERC1-202ENST00000558324 CNNM2Q9H8M5 875 aa13.97□□□□□ -0.17
HERC1-202ENST00000558324 LRRC37A2A6NM11 1700 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 DHX16O60231 1041 aaKnown RBP13.96□□□□□ -0.17
HERC1-202ENST00000558324 PQBP1O60828 265 aaKnown RBP13.96□□□□□ -0.17
HERC1-202ENST00000558324 PTGS1P23219 599 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 CALML3P27482 149 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 TNFAIP2Q03169 654 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 TLE2Q04725 743 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 KCNA10Q16322 511 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 CCDC178Q5BJE1 867 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 SH3RF1Q7Z6J0 888 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 KLHDC9Q8NEP7 349 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 SPC25Q9HBM1 224 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 STARD7Q9NQZ5 370 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 PDLIM7Q9NR12 457 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 SMCHD1A6NHR9 2005 aa13.96□□□□□ -0.17
HERC1-202ENST00000558324 MCM3APO60318 1980 aa13.96□□□□□ -0.18
HERC1-202ENST00000558324 NT5C2P49902 561 aa13.95□□□□□ -0.18
HERC1-202ENST00000558324 BEX3Q00994 111 aa13.95□□□□□ -0.18
HERC1-202ENST00000558324 CDC37Q16543 378 aaPredicted RBP13.95□□□□□ -0.18
HERC1-202ENST00000558324 GNASQ5JWF2 1037 aa13.95□□□□□ -0.18
HERC1-202ENST00000558324 IFIT1BQ5T764 474 aaKnown RBP13.95□□□□□ -0.18
HERC1-202ENST00000558324 CYB5R4Q7L1T6 521 aa13.95□□□□□ -0.18
HERC1-202ENST00000558324 CLEC4DQ8WXI8 215 aa13.95□□□□□ -0.18
HERC1-202ENST00000558324 TSEN34Q9BSV6 310 aaKnown RBP13.95□□□□□ -0.18
HERC1-202ENST00000558324 PDGFCQ9NRA1 345 aa13.95□□□□□ -0.18
HERC1-202ENST00000558324 LTBP2Q14767 1821 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 WDR19Q8NEZ3 1342 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 LCTP09848 1927 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 TRIM43BA6NCK2 446 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 MOXD2PA6NHM9 499 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 SGSM2O43147 1006 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 ASGR1P07306 291 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 CYP21A2P08686 494 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 PARP1P09874 1014 aaKnown RBP13.94□□□□□ -0.18
HERC1-202ENST00000558324 CST5P28325 142 aaPredicted RBP13.94□□□□□ -0.18
HERC1-202ENST00000558324 ALDH5A1P51649 535 aaPredicted RBP13.94□□□□□ -0.18
HERC1-202ENST00000558324 GJA9P57773 515 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 TRDNQ13061 729 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 ASPRV1Q53RT3 343 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 TMEM63BQ5T3F8 832 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 C1orf53Q5VUE5 145 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 CCSAPQ6IQ19 270 aaPredicted RBP13.94□□□□□ -0.18
HERC1-202ENST00000558324 RNF207Q6ZRF8 634 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 TLK2Q86UE8 772 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 SKAP1Q86WV1 359 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 NUP133Q8WUM0 1156 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 ANKS1AQ92625 1134 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 BADQ92934 168 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 VTI1AQ96AJ9 217 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 TRIM43Q96BQ3 446 aaPredicted RBP13.94□□□□□ -0.18
HERC1-202ENST00000558324 GLT1D1Q96MS3 346 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 UPF3AQ9H1J1 476 aaKnown RBP13.94□□□□□ -0.18
HERC1-202ENST00000558324 VAT1LQ9HCJ6 419 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 ADD3Q9UEY8 706 aaKnown RBP13.94□□□□□ -0.18
HERC1-202ENST00000558324 TAF6LQ9Y6J9 622 aa13.94□□□□□ -0.18
HERC1-202ENST00000558324 U3KPZ7 1027 aaPredicted RBP13.94□□□□□ -0.18
HERC1-202ENST00000558324 CLTBP09497 229 aa13.93□□□□□ -0.18
HERC1-202ENST00000558324 SMPD1P17405 629 aa13.93□□□□□ -0.18
HERC1-202ENST00000558324 RPS6P62753 249 aaKnown RBP13.93□□□□□ -0.18
HERC1-202ENST00000558324 KIAA1211Q6ZU35 1233 aa13.93□□□□□ -0.18
HERC1-202ENST00000558324 RALYLQ86SE5 291 aaKnown RBP13.93□□□□□ -0.18
HERC1-202ENST00000558324 ADGRF4Q8IZF3 695 aa13.93□□□□□ -0.18
HERC1-202ENST00000558324 PCSK9Q8NBP7 692 aaKnown RBP13.93□□□□□ -0.18
HERC1-202ENST00000558324 PNMA2Q9UL42 364 aa13.93□□□□□ -0.18
HERC1-202ENST00000558324 DNAH12Q6ZR08 3092 aa13.93□□□□□ -0.18
HERC1-202ENST00000558324 CTAGE5O15320 804 aa13.92□□□□□ -0.18
HERC1-202ENST00000558324 DYNC1LI2O43237 492 aaPredicted RBP13.92□□□□□ -0.18
HERC1-202ENST00000558324 SEC23AQ15436 765 aa13.92□□□□□ -0.18
HERC1-202ENST00000558324 QRICH1Q2TAL8 776 aa13.92□□□□□ -0.18
HERC1-202ENST00000558324 TAPT1Q6NXT6 567 aa13.92□□□□□ -0.18
HERC1-202ENST00000558324 STOX1Q6ZVD7 989 aa13.92□□□□□ -0.18
HERC1-202ENST00000558324 CHST3Q7LGC8 479 aa13.92□□□□□ -0.18
HERC1-202ENST00000558324 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
HERC1-202ENST00000558324 AP5M1Q9H0R1 490 aa13.92□□□□□ -0.18
HERC1-202ENST00000558324 VTA1Q9NP79 307 aa13.92□□□□□ -0.18
HERC1-202ENST00000558324 TMEM39AQ9NV64 488 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms