RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 MYH6P13533 1939 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 TNKSO95271 1327 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 POTEFA5A3E0 1075 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 E7EWF7 191 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 CTAGE5O15320 804 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 PEX10O60683 326 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 IGHA2P01877 340 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 ZSCAN22P10073 491 aaPredicted RBP9.15□□□□□ -0.94
RTF1-205ENST00000558298 HOXD10P28358 340 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 MAPK4P31152 587 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 HSPA4P34932 840 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 RCAN1P53805 252 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 CCNA1P78396 465 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 PTPN14Q15678 1187 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 TPD52L1Q16890 204 aaPredicted RBP9.15□□□□□ -0.94
RTF1-205ENST00000558298 FAM47AQ5JRC9 791 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 GPATCH4Q5T3I0 446 aaKnown RBP9.15□□□□□ -0.94
RTF1-205ENST00000558298 CREB3L3Q68CJ9 461 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 SARM1Q6SZW1 724 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 STOX1Q6ZVD7 989 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 ABRAQ8N0Z2 381 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 ENAHQ8N8S7 591 aaPredicted RBP9.15□□□□□ -0.94
RTF1-205ENST00000558298 PRPF38AQ8NAV1 312 aaKnown RBP9.15□□□□□ -0.94
RTF1-205ENST00000558298 GPRC5AQ8NFJ5 357 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 PXYLP1Q8TE99 480 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 USP6NLQ92738 828 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 ZSCAN10Q96SZ4 725 aaPredicted RBP9.15□□□□□ -0.94
RTF1-205ENST00000558298 TMEM47Q9BQJ4 181 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 SH2B1Q9NRF2 756 aaPredicted RBP9.15□□□□□ -0.94
RTF1-205ENST00000558298 ZSWIM5Q9P217 1185 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 CLIP2Q9UDT6 1046 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 GJD2Q9UKL4 321 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 ZNF214Q9UL59 606 aaPredicted RBP9.15□□□□□ -0.94
RTF1-205ENST00000558298 STX8Q9UNK0 236 aa9.15□□□□□ -0.94
RTF1-205ENST00000558298 ZNFX1Q9P2E3 1918 aaKnown RBP9.15□□□□□ -0.95
RTF1-205ENST00000558298 PLXNA1Q9UIW2 1896 aa9.15□□□□□ -0.95
RTF1-205ENST00000558298 FRMPD3Q5JV73 1810 aa9.15□□□□□ -0.95
RTF1-205ENST00000558298 NID2Q14112 1375 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 B4E1Z4 1266 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 VWA5AO00534 786 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 SLC27A2O14975 620 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 FLOT1O75955 427 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 SLC25A27O95847 323 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 HMGB1P09429 215 aaKnown RBP9.14□□□□□ -0.95
RTF1-205ENST00000558298 HOXC6P09630 235 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 PDHBP11177 359 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 BMP3P12645 472 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 XRCC5P13010 732 aaKnown RBP9.14□□□□□ -0.95
RTF1-205ENST00000558298 CAPN2P17655 700 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 CALRP27797 417 aaKnown RBP9.14□□□□□ -0.95
RTF1-205ENST00000558298 LIFRP42702 1097 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 FLT3LGP49771 235 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 STAT2P52630 851 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 MLLT1Q03111 559 aaPredicted RBP9.14□□□□□ -0.95
RTF1-205ENST00000558298 SART3Q15020 963 aaKnown RBP9.14□□□□□ -0.95
RTF1-205ENST00000558298 Q3C1V9 767 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 SLC9C1Q4G0N8 1177 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 SLFN13Q68D06 897 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 RALYLQ86SE5 291 aaKnown RBP9.14□□□□□ -0.95
RTF1-205ENST00000558298 SGMS1Q86VZ5 419 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 DRC7Q8IY82 874 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 MSL3Q8N5Y2 521 aaKnown RBP9.14□□□□□ -0.95
RTF1-205ENST00000558298 SH3TC2Q8TF17 1288 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 CHMP4CQ96CF2 233 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 SHISA4Q96DD7 197 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 MRFAP1L1Q96HT8 127 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 TMEM87BQ96K49 555 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 SLF1Q9BQI6 1058 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 UBAC1Q9BSL1 405 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 FUCA2Q9BTY2 467 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 TANGO6Q9C0B7 1094 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 SCAND2PQ9GZW5 306 aaPredicted RBP9.14□□□□□ -0.95
RTF1-205ENST00000558298 SLC38A10Q9HBR0 1119 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 IMPACTQ9P2X3 320 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 PDE4DIPQ5VU43 2346 aa9.14□□□□□ -0.95
RTF1-205ENST00000558298 TNPO2O14787 897 aaKnown RBP9.13□□□□□ -0.95
RTF1-205ENST00000558298 STRNO43815 780 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 NMT2O60551 498 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 FMNL1O95466 1100 aaPredicted RBP9.13□□□□□ -0.95
RTF1-205ENST00000558298 TUBBP07437 444 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 ZKSCAN1P17029 563 aaPredicted RBP9.13□□□□□ -0.95
RTF1-205ENST00000558298 GRK4P32298 578 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 SLC1A4P43007 532 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 ZNF543Q08ER8 600 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 GRB14Q14449 540 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 ZYXQ15942 572 aaKnown RBP9.13□□□□□ -0.95
RTF1-205ENST00000558298 ASPRV1Q53RT3 343 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 RRP12Q5JTH9 1297 aaKnown RBP9.13□□□□□ -0.95
RTF1-205ENST00000558298 FAM83BQ5T0W9 1011 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 UBE2Q1Q7Z7E8 422 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 RIOX2Q8IUF8 465 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 LRRC47Q8N1G4 583 aaKnown RBP9.13□□□□□ -0.95
RTF1-205ENST00000558298 TMTC2Q8N394 836 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 IQUBQ8NA54 791 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 SLAIN1Q8ND83 568 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 PNMA1Q8ND90 353 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 MNS1Q8NEH6 495 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 NKX2-3Q8TAU0 364 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 GOLGA5Q8TBA6 731 aa9.13□□□□□ -0.95
RTF1-205ENST00000558298 CHURC1Q8WUH1 139 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms