RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 XAGE2Q96GT9 111 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 ZNF496Q96IT1 587 aaPredicted RBP5.64□□□□□ -1.51
HMG20A-204ENST00000558288 RNPC3Q96LT9 517 aaKnown RBP5.64□□□□□ -1.51
HMG20A-204ENST00000558288 LACRTQ9GZZ8 138 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 ZNF408Q9H9D4 720 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 PPANQ9NQ55 473 aaKnown RBP5.64□□□□□ -1.51
HMG20A-204ENST00000558288 LTN1O94822 1766 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 hCG_1642624A0A1W2PR95 340 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 ERICH2A1L162 156 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 FAM205CA6NFA0 338 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 FSBPO95073 299 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 VEGFAP15692 232 aaPredicted RBP5.64□□□□□ -1.51
HMG20A-204ENST00000558288 LSP1P33241 339 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 PAFAH1B1P43034 410 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 GUCY2FP51841 1108 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 VAV2P52735 878 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 CTDSPL2Q05D32 466 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 ZNF174Q15697 407 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 NTRK3Q16288 839 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 CCDC57Q2TAC2 916 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 NAA35Q5VZE5 725 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 C8orf74Q6P047 294 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 SPATS2Q86XZ4 545 aaKnown RBP5.64□□□□□ -1.51
HMG20A-204ENST00000558288 CNBD1Q8NA66 436 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 ZNF473Q8WTR7 871 aaKnown RBP5.64□□□□□ -1.51
HMG20A-204ENST00000558288 TMEM87BQ96K49 555 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 FOXP1Q9H334 677 aaPredicted RBP5.64□□□□□ -1.51
HMG20A-204ENST00000558288 EHD2Q9NZN4 543 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 LIMA1Q9UHB6 759 aaKnown RBP5.64□□□□□ -1.51
HMG20A-204ENST00000558288 TRIM49BA6NDI0 452 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 A6NNZ2 444 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 TACC1O75410 805 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 RPSAP08865 295 aaKnown RBP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 PARP1P09874 1014 aaKnown RBP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 EZRP15311 586 aaKnown RBP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 GBP2P32456 591 aaPredicted RBP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 HDLBPQ00341 1268 aaKnown RBP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 NFIXQ14938 502 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 NAA25Q14CX7 972 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 SNCBQ16143 134 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 TUBB8Q3ZCM7 444 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 ALS2CLQ60I27 953 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 CCDC13Q8IYE1 715 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 ZIM3Q96PE6 472 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 SH3GL2Q99962 352 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 UBAC1Q9BSL1 405 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 BEGAINQ9BUH8 593 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 EPN3Q9H201 632 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 LY9Q9HBG7 655 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 ABT1Q9ULW3 272 aaKnown RBP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 BCL9O00512 1426 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 WDR19Q8NEZ3 1342 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 RCCD1A6NED2 376 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 GOLGA6L10A6NI86 522 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 USO1O60763 962 aaKnown RBP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 XBP1P17861 261 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 NR1D1P20393 614 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 PAX7P23759 505 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 FNTAP49354 379 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 FOXO4P98177 505 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 SATB1Q01826 763 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 DDR1Q08345 913 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 KIRREL3Q8IZU9 778 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 MB21D1Q8N884 522 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 SPATA20Q8TB22 786 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 TRIM47Q96LD4 638 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 SLC4A9Q96Q91 983 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 ZBTB3Q9H5J0 574 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 NHEJ1Q9H9Q4 299 aaPredicted RBP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 SLC40A1Q9NP59 571 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 FAM217BQ9NTX9 383 aaPredicted RBP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 CWC25Q9NXE8 425 aaPredicted RBP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 BCCIPQ9P287 314 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 LRWD1Q9UFC0 647 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 RWDD2AQ9UIY3 292 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 MCM8Q9UJA3 840 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 GDAQ9Y2T3 454 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 MAP3K15Q6ZN16 1313 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 ESYT3A0FGR9 886 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 B4DLN1 442 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 PATL2C9JE40 543 aaKnown RBP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 KIF3CO14782 793 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 MOCS3O95396 460 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 DEXIO95424 95 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 SNRPA1P09661 255 aaKnown RBP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 PDHBP11177 359 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 FECHP22830 423 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 ODF2Q5BJF6 829 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 NFRKBQ6P4R8 1299 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 EMBQ6PCB8 327 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 NLRP14Q86W24 1093 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 SPATA4Q8NEY3 305 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 MIEF2Q96C03 454 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 CCDC42Q96M95 316 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 CCT8L2Q96SF2 557 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 NAPBQ9H115 298 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 VCPKMTQ9H867 229 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 GPR108Q9NPR9 543 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 AGPAT5Q9NUQ2 364 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms