RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ADCY7P51828 1080 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 WWC2Q6AWC2 1192 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 MCTP1Q6DN14 999 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 TEX13BQ9BXU2 312 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 R3HDMLQ9H3Y0 253 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 EHMT1Q9H9B1 1298 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 VPS54Q9P1Q0 977 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 FBXO40Q9UH90 709 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 PCDHA4Q9UN74 947 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 MTMR6Q9Y217 621 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 SMCO2A6NFE2 343 aa14.23□□□□□ -0.13
TPM1-209ENST00000558072 SLC25A27O95847 323 aa14.23□□□□□ -0.13
TPM1-209ENST00000558072 F13A1P00488 732 aa14.23□□□□□ -0.13
TPM1-209ENST00000558072 FOSBP53539 338 aa14.23□□□□□ -0.13
TPM1-209ENST00000558072 CCNA1P78396 465 aa14.23□□□□□ -0.13
TPM1-209ENST00000558072 CSPP1Q1MSJ5 1256 aa14.23□□□□□ -0.13
TPM1-209ENST00000558072 SMCR8Q8TEV9 937 aaPredicted RBP14.23□□□□□ -0.13
TPM1-209ENST00000558072 GBP4Q96PP9 640 aa14.23□□□□□ -0.13
TPM1-209ENST00000558072 NAP1L4Q99733 375 aaKnown RBP14.23□□□□□ -0.13
TPM1-209ENST00000558072 ASCC2Q9H1I8 757 aaPredicted RBP14.23□□□□□ -0.13
TPM1-209ENST00000558072 PSTPIP2Q9H939 334 aa14.23□□□□□ -0.13
TPM1-209ENST00000558072 RIC8AQ9NPQ8 531 aa14.23□□□□□ -0.13
TPM1-209ENST00000558072 TSKSQ9UJT2 592 aa14.23□□□□□ -0.13
TPM1-209ENST00000558072 CCPG1Q9ULG6 757 aa14.23□□□□□ -0.13
TPM1-209ENST00000558072 NOL7Q9UMY1 257 aaKnown RBP14.23□□□□□ -0.13
TPM1-209ENST00000558072 RABGAP1Q9Y3P9 1069 aa14.23□□□□□ -0.13
TPM1-209ENST00000558072 SPDYE16A6NNV3 312 aaPredicted RBP14.22□□□□□ -0.13
TPM1-209ENST00000558072 U2AF2P26368 475 aaKnown RBP eCLIP14.22□□□□□ -0.131e-6■■■■□ 20
TPM1-209ENST00000558072 HERVK_113P62684 666 aa14.22□□□□□ -0.13
TPM1-209ENST00000558072 AP3B2Q13367 1082 aa14.22□□□□□ -0.13
TPM1-209ENST00000558072 CCDC174Q6PII3 467 aa14.22□□□□□ -0.13
TPM1-209ENST00000558072 KRT25Q7Z3Z0 450 aa14.22□□□□□ -0.13
TPM1-209ENST00000558072 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
TPM1-209ENST00000558072 DIS3L2Q8IYB7 885 aaKnown RBP14.22□□□□□ -0.13
TPM1-209ENST00000558072 BLIDQ8IZY5 108 aa14.22□□□□□ -0.13
TPM1-209ENST00000558072 CHST13Q8NET6 341 aa14.22□□□□□ -0.13
TPM1-209ENST00000558072 ZNF396Q96N95 335 aaPredicted RBP14.22□□□□□ -0.13
TPM1-209ENST00000558072 P2RX7Q99572 595 aaKnown RBP14.22□□□□□ -0.13
TPM1-209ENST00000558072 CFAP45Q9UL16 551 aa14.22□□□□□ -0.13
TPM1-209ENST00000558072 BAZ2BQ9UIF8 2168 aaKnown RBP14.22□□□□□ -0.13
TPM1-209ENST00000558072 GOLGA6L22H0YM25 854 aa14.21□□□□□ -0.13
TPM1-209ENST00000558072 PIK3CDO00329 1044 aa14.21□□□□□ -0.13
TPM1-209ENST00000558072 CNMDO75829 334 aa14.21□□□□□ -0.13
TPM1-209ENST00000558072 STAT3P40763 770 aa14.21□□□□□ -0.13
TPM1-209ENST00000558072 TRAPPC10P48553 1259 aa14.21□□□□□ -0.13
TPM1-209ENST00000558072 RILPL1Q5EBL4 403 aa14.21□□□□□ -0.13
TPM1-209ENST00000558072 REXO1Q8N1G1 1221 aaKnown RBP14.21□□□□□ -0.13
TPM1-209ENST00000558072 GPKOWQ92917 476 aaPredicted RBP eCLIP14.21□□□□□ -0.13
TPM1-209ENST00000558072 AIFM3Q96NN9 605 aa14.21□□□□□ -0.13
TPM1-209ENST00000558072 PAGR1Q9BTK6 254 aa14.21□□□□□ -0.13
TPM1-209ENST00000558072 TXNRD2Q9NNW7 524 aa14.21□□□□□ -0.13
TPM1-209ENST00000558072 SMCHD1A6NHR9 2005 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 CCDC194A0A1B0GVG4 234 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 GCOM1H8Y6P7 765 aaPredicted RBP14.2□□□□□ -0.14
TPM1-209ENST00000558072 PPP1R11O60927 126 aaPredicted RBP14.2□□□□□ -0.14
TPM1-209ENST00000558072 BMP15O95972 392 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 POLR2MP0CAP2 368 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 PTMSP20962 102 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 MAP2K2P36507 400 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 TM4SF4P48230 202 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 GUCY1B3Q02153 619 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 TAF1CQ15572 869 aaPredicted RBP14.2□□□□□ -0.14
TPM1-209ENST00000558072 USH1GQ495M9 461 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 NOSTRINQ8IVI9 506 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 CPXCR1Q8N123 301 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 SHCBP1Q8NEM2 672 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 COA7Q96BR5 231 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 BTBD7Q9P203 1132 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 CPA4Q9UI42 421 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 CEP131Q9UPN4 1083 aa14.2□□□□□ -0.14
TPM1-209ENST00000558072 ADGRA2Q96PE1 1338 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 SPDYE3A6NKU9 549 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 B4DLN1 442 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 TBC1D8O95759 1140 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 ALAS1P13196 640 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 KRT85P78386 507 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 CRHR2Q13324 411 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 ORC2Q13416 577 aaPredicted RBP14.19□□□□□ -0.14
TPM1-209ENST00000558072 SNRNP48Q6IEG0 339 aaKnown RBP14.19□□□□□ -0.14
TPM1-209ENST00000558072 RIOX2Q8IUF8 465 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 CCAR1Q8IX12 1150 aaKnown RBP14.19□□□□□ -0.14
TPM1-209ENST00000558072 DNAJC5GQ8N7S2 189 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 GPRC5AQ8NFJ5 357 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 SHISA4Q96DD7 197 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 MPHOSPH6Q99547 160 aaKnown RBP14.19□□□□□ -0.14
TPM1-209ENST00000558072 MROH8Q9H579 483 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 ACAD9Q9H845 621 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 ZFYVE28Q9HCC9 887 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 RAVER2Q9HCJ3 691 aaKnown RBP14.19□□□□□ -0.14
TPM1-209ENST00000558072 KCNJ14Q9UNX9 436 aa14.19□□□□□ -0.14
TPM1-209ENST00000558072 GHRHRQ02643 423 aa14.18□□□□□ -0.14
TPM1-209ENST00000558072 RESTQ13127 1097 aa14.18□□□□□ -0.14
TPM1-209ENST00000558072 PLS1Q14651 629 aa14.18□□□□□ -0.14
TPM1-209ENST00000558072 NONOQ15233 471 aaKnown RBP eCLIP14.18□□□□□ -0.14
TPM1-209ENST00000558072 CLEC17AQ6ZS10 378 aa14.18□□□□□ -0.14
TPM1-209ENST00000558072 ANKRD13CQ8N6S4 541 aa14.18□□□□□ -0.14
TPM1-209ENST00000558072 REPS2Q8NFH8 660 aa14.18□□□□□ -0.14
TPM1-209ENST00000558072 AGBL1Q96MI9 1066 aa14.18□□□□□ -0.14
TPM1-209ENST00000558072 TRERF1Q96PN7 1200 aa14.18□□□□□ -0.14
TPM1-209ENST00000558072 SCAND2PQ9GZW5 306 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms