RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 POTEEQ6S8J3 1075 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 SCUBE1Q8IWY4 988 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 ZIM3Q96PE6 472 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 SEC62Q99442 399 aaKnown RBP12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 MAK16Q9BXY0 300 aaKnown RBP12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 ETNK2Q9NVF9 386 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 ARHGEF38Q9NXL2 777 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 CEP131Q9UPN4 1083 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 PPME1Q9Y570 386 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 TARBP1Q13395 1621 aaKnown RBP12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 PMS2P54278 862 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 ADKP55263 362 aaKnown RBP12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 KCNJ2P63252 427 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 ITGB3BPQ13352 177 aaPredicted RBP12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 MMS19Q96T76 1030 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 MRPL46Q9H2W6 279 aaKnown RBP12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 SEL1LQ9UBV2 794 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 ZMYND8Q9ULU4 1186 aaPredicted RBP12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 SUGT1Q9Y2Z0 365 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 SOWAHDA6NJG2 315 aa12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 GNAI2P04899 355 aa12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 HSPA8P11142 646 aaKnown RBP12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 CCNFP41002 786 aa12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 MTHFSP49914 203 aa12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 IFI16Q16666 785 aaKnown RBP12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 IMMTQ16891 758 aaKnown RBP12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 ZNF365Q70YC5 407 aa12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 KCTD17Q8N5Z5 321 aa12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 ABCF3Q9NUQ8 709 aa12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 DAAM1Q9Y4D1 1078 aa12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 CPSF1Q10570 1443 aaKnown RBP12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 GSTA2P09210 222 aa12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 RAD9BQ6WBX8 426 aa12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 ZNF804AQ7Z570 1209 aa12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 LONP2Q86WA8 852 aa12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 DHTKD1Q96HY7 919 aaPredicted RBP12.15□□□□□ -0.46
SEMA4B-204ENST00000558065 SEPT2Q15019 361 aa12.15□□□□□ -0.47
SEMA4B-204ENST00000558065 CLEC4GQ6UXB4 293 aa12.15□□□□□ -0.47
SEMA4B-204ENST00000558065 RUFY4Q6ZNE9 571 aa12.15□□□□□ -0.47
SEMA4B-204ENST00000558065 SMC6Q96SB8 1091 aa12.15□□□□□ -0.47
SEMA4B-204ENST00000558065 SETDB2Q96T68 719 aa12.15□□□□□ -0.47
SEMA4B-204ENST00000558065 ZNF518AQ6AHZ1 1483 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 CCT8L1PA6NM43 557 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 TMEM110-MUSTN1A8MSY1 372 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 ACTN4O43707 911 aaKnown RBP12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 TRIM37O94972 964 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 ASLP04424 464 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 PYGMP11217 842 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 NQO1P15559 274 aaKnown RBP12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 CDK17Q00537 523 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 GLE1Q53GS7 698 aaKnown RBP12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 TRAPPC11Q7Z392 1133 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 UCMAQ8WVF2 138 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 MAELQ96JY0 434 aaKnown RBP12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 PANX2Q96RD6 677 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 TIPINQ9BVW5 301 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 FAM192AQ9GZU8 254 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 AGAP1Q9UPQ3 857 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 ABCC6O95255 1503 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 SALL3Q9BXA9 1300 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 ZNF233A6NK53 670 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 ITGA2BP08514 1039 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 CTAG1AP78358 180 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 CFAP100Q494V2 611 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 SYDE2Q5VT97 1194 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 FAM117BQ6P1L5 589 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 GIMAP1Q8WWP7 306 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 TSKSQ9UJT2 592 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 TRIM35Q9UPQ4 493 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 SSX2IPQ9Y2D8 614 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 WDR46O15213 610 aaKnown RBP12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 CBFA2T2O43439 604 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 CYP1A1P04798 512 aaPredicted RBP12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 HALP42357 657 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 SYT2Q8N9I0 419 aaPredicted RBP12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 VCXQ9H320 206 aa12.14□□□□□ -0.47
SEMA4B-204ENST00000558065 PREX1Q8TCU6 1659 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 A0A1W2PQ67 120 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 ACADSP16219 412 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 PORP16435 677 aaPredicted RBP12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 PCK1P35558 622 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 HPCAP84074 193 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 SH2D4BQ5SQS7 431 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 MIGA2Q7L4E1 593 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 CCNJLQ8IV13 435 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 NECAB1Q8N987 351 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 GDAP1Q8TB36 358 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 ATP6V0A1Q93050 837 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 NRDE2Q9H7Z3 1164 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 SH2B1Q9NRF2 756 aaPredicted RBP12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 ATAD3AQ9NVI7 634 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 MINK1Q8N4C8 1332 aaPredicted RBP12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 PRC1O43663 620 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 MATR3P43243 847 aaKnown RBP eCLIP12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 FAM160A1Q05DH4 1040 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 DAB2IPQ5VWQ8 1189 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 TSHZ3Q63HK5 1081 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 788.3 ms