RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 DIS3Q9Y2L1 958 aaKnown RBP13.47□□□□□ -0.25
LINC00648-204ENST00000557749 PLXNB2O15031 1838 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 MYH4Q9Y623 1939 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 SMIM22K7EJ46 135 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 ZNF213O14771 459 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 PLA2G6O60733 806 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 SLC1A4P43007 532 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 TMEM132BQ14DG7 1078 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 KIAA1755Q5JYT7 1200 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 MFSD6Q6ZSS7 791 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 UBE2Q1Q7Z7E8 422 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 MSL3Q8N5Y2 521 aaKnown RBP13.46□□□□□ -0.25
LINC00648-204ENST00000557749 ESR2Q92731 530 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 DPF3Q92784 378 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 MMP19Q99542 508 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 DSCC1Q9BVC3 393 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 TCP11L1Q9NUJ3 509 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 OGDHLQ9ULD0 1010 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 ISY1Q9ULR0 285 aaKnown RBP13.46□□□□□ -0.25
LINC00648-204ENST00000557749 RLFQ13129 1914 aa13.46□□□□□ -0.25
LINC00648-204ENST00000557749 PARP14Q460N5 1801 aa13.46□□□□□ -0.26
LINC00648-204ENST00000557749 GOLGA8CPA6NN73 597 aa13.45□□□□□ -0.26
LINC00648-204ENST00000557749 MDM2Q00987 491 aaPredicted RBP13.45□□□□□ -0.26
LINC00648-204ENST00000557749 CACNB2Q08289 660 aaPredicted RBP13.45□□□□□ -0.26
LINC00648-204ENST00000557749 IKQ13123 557 aaPredicted RBP13.45□□□□□ -0.26
LINC00648-204ENST00000557749 IMMTQ16891 758 aaKnown RBP13.45□□□□□ -0.26
LINC00648-204ENST00000557749 FAM47AQ5JRC9 791 aa13.45□□□□□ -0.26
LINC00648-204ENST00000557749 AKNAD1Q5T1N1 836 aa13.45□□□□□ -0.26
LINC00648-204ENST00000557749 VPS53Q5VIR6 699 aa13.45□□□□□ -0.26
LINC00648-204ENST00000557749 LRRC47Q8N1G4 583 aaKnown RBP13.45□□□□□ -0.26
LINC00648-204ENST00000557749 CHST13Q8NET6 341 aa13.45□□□□□ -0.26
LINC00648-204ENST00000557749 ANKK1Q8NFD2 765 aa13.45□□□□□ -0.26
LINC00648-204ENST00000557749 DCAF4Q8WV16 495 aa13.45□□□□□ -0.26
LINC00648-204ENST00000557749 STAG1Q8WVM7 1258 aa13.45□□□□□ -0.26
LINC00648-204ENST00000557749 TTC14Q96N46 770 aa13.45□□□□□ -0.26
LINC00648-204ENST00000557749 ZNF214Q9UL59 606 aaPredicted RBP13.45□□□□□ -0.26
LINC00648-204ENST00000557749 FOXP2O15409 715 aa13.44□□□□□ -0.26
LINC00648-204ENST00000557749 PEX10O60683 326 aa13.44□□□□□ -0.26
LINC00648-204ENST00000557749 TOP1P11387 765 aaKnown RBP13.44□□□□□ -0.26
LINC00648-204ENST00000557749 CTDSPL2Q05D32 466 aa13.44□□□□□ -0.26
LINC00648-204ENST00000557749 TKFCQ3LXA3 575 aa13.44□□□□□ -0.26
LINC00648-204ENST00000557749 SNRNP48Q6IEG0 339 aaKnown RBP13.44□□□□□ -0.26
LINC00648-204ENST00000557749 CWC27Q6UX04 472 aaKnown RBP13.44□□□□□ -0.26
LINC00648-204ENST00000557749 IQCA1Q86XH1 822 aa13.44□□□□□ -0.26
LINC00648-204ENST00000557749 KIFC2Q96AC6 838 aa13.44□□□□□ -0.26
LINC00648-204ENST00000557749 CNNM2Q9H8M5 875 aa13.44□□□□□ -0.26
LINC00648-204ENST00000557749 SLC38A10Q9HBR0 1119 aa13.44□□□□□ -0.26
LINC00648-204ENST00000557749 FBXO28Q9NVF7 368 aa13.44□□□□□ -0.26
LINC00648-204ENST00000557749 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.44□□□□□ -0.26
LINC00648-204ENST00000557749 DAXXQ9UER7 740 aaPredicted RBP13.44□□□□□ -0.26
LINC00648-204ENST00000557749 DDX20Q9UHI6 824 aaKnown RBP13.44□□□□□ -0.26
LINC00648-204ENST00000557749 BRCA2P51587 3418 aa13.44□□□□□ -0.26
LINC00648-204ENST00000557749 NOVP48745 357 aa13.43□□□□□ -0.26
LINC00648-204ENST00000557749 PDE4DQ08499 809 aa13.43□□□□□ -0.26
LINC00648-204ENST00000557749 CCL14Q16627 93 aa13.43□□□□□ -0.26
LINC00648-204ENST00000557749 RRP12Q5JTH9 1297 aaKnown RBP13.43□□□□□ -0.26
LINC00648-204ENST00000557749 TTC22Q5TAA0 569 aa13.43□□□□□ -0.26
LINC00648-204ENST00000557749 ZNF589Q86UQ0 364 aaPredicted RBP13.43□□□□□ -0.26
LINC00648-204ENST00000557749 ARRDC4Q8NCT1 418 aa13.43□□□□□ -0.26
LINC00648-204ENST00000557749 REPS2Q8NFH8 660 aa13.43□□□□□ -0.26
LINC00648-204ENST00000557749 DDX11Q96FC9 970 aa13.43□□□□□ -0.26
LINC00648-204ENST00000557749 LRCH3Q96II8 777 aa13.43□□□□□ -0.26
LINC00648-204ENST00000557749 C11orf49Q9H6J7 331 aa13.43□□□□□ -0.26
LINC00648-204ENST00000557749 TNRC18O15417 2968 aaPredicted RBP13.42□□□□□ -0.26
LINC00648-204ENST00000557749 TMEM232C9JQI7 657 aa13.42□□□□□ -0.26
LINC00648-204ENST00000557749 SEPT4O43236 478 aa13.42□□□□□ -0.26
LINC00648-204ENST00000557749 CNGA1P29973 690 aa13.42□□□□□ -0.26
LINC00648-204ENST00000557749 PARP9Q8IXQ6 854 aa13.42□□□□□ -0.26
LINC00648-204ENST00000557749 PAWRQ96IZ0 340 aaKnown RBP13.42□□□□□ -0.26
LINC00648-204ENST00000557749 MAML3Q96JK9 1138 aa13.42□□□□□ -0.26
LINC00648-204ENST00000557749 NUP88Q99567 741 aaPredicted RBP13.42□□□□□ -0.26
LINC00648-204ENST00000557749 KRT23Q9C075 422 aa13.42□□□□□ -0.26
LINC00648-204ENST00000557749 CNPY2Q9Y2B0 182 aa13.42□□□□□ -0.26
LINC00648-204ENST00000557749 CYBAP13498 195 aa13.41□□□□□ -0.26
LINC00648-204ENST00000557749 TRIM32Q13049 653 aa13.41□□□□□ -0.26
LINC00648-204ENST00000557749 TRDNQ13061 729 aa13.41□□□□□ -0.26
LINC00648-204ENST00000557749 CCDC96Q2M329 555 aa13.41□□□□□ -0.26
LINC00648-204ENST00000557749 DGKHQ86XP1 1220 aa13.41□□□□□ -0.26
LINC00648-204ENST00000557749 ANKRD35Q8N283 1001 aa13.41□□□□□ -0.26
LINC00648-204ENST00000557749 NPLOC4Q8TAT6 608 aa13.41□□□□□ -0.26
LINC00648-204ENST00000557749 ACAD9Q9H845 621 aa13.41□□□□□ -0.26
LINC00648-204ENST00000557749 COL11A1P12107 1806 aaPredicted RBP13.41□□□□□ -0.26
LINC00648-204ENST00000557749 PFASO15067 1338 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 SYNGAP1Q96PV0 1343 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 KBTBD13C9JR72 458 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 DNM1LO00429 736 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 COBLO75128 1261 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 IGHA2P01877 340 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 MCCP23508 829 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 CCND3P30281 292 aaPredicted RBP13.4□□□□□ -0.26
LINC00648-204ENST00000557749 CYP2C19P33261 490 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 HAND2P61296 217 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 GPATCH4Q5T3I0 446 aaKnown RBP13.4□□□□□ -0.26
LINC00648-204ENST00000557749 CPXCR1Q8N123 301 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 TINF2Q9BSI4 451 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 MAF1Q9H063 256 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 IL17RBQ9NRM6 502 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 FLRT1Q9NZU1 646 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 LAMA4Q16363 1823 aa13.4□□□□□ -0.26
LINC00648-204ENST00000557749 RARBP10826 455 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms