RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 SETXQ7Z333 2677 aaKnown RBP16.15■□□□□ 0.18
TMEM260-215ENST00000557626 NCK2O43639 380 aa16.15■□□□□ 0.18
TMEM260-215ENST00000557626 GJB5O95377 273 aa16.15■□□□□ 0.18
TMEM260-215ENST00000557626 STAT3P40763 770 aa16.15■□□□□ 0.18
TMEM260-215ENST00000557626 DEFB103AP81534 67 aa16.15■□□□□ 0.18
TMEM260-215ENST00000557626 RETREG2Q8NC44 543 aa16.15■□□□□ 0.18
TMEM260-215ENST00000557626 DDX11Q96FC9 970 aa16.15■□□□□ 0.18
TMEM260-215ENST00000557626 SERPINB13Q9UIV8 391 aa16.15■□□□□ 0.18
TMEM260-215ENST00000557626 ASTN1O14525 1302 aa16.15■□□□□ 0.18
TMEM260-215ENST00000557626 A0A1W2PRG0 241 aa16.14■□□□□ 0.17
TMEM260-215ENST00000557626 CIAO1O76071 339 aa16.14■□□□□ 0.17
TMEM260-215ENST00000557626 IQCF3P0C7M6 154 aa16.14■□□□□ 0.17
TMEM260-215ENST00000557626 GUCY1A2P33402 732 aa16.14■□□□□ 0.17
TMEM260-215ENST00000557626 SEPT2Q15019 361 aa16.14■□□□□ 0.17
TMEM260-215ENST00000557626 ZNF467Q7Z7K2 595 aaPredicted RBP16.14■□□□□ 0.17
TMEM260-215ENST00000557626 TLK2Q86UE8 772 aa16.14■□□□□ 0.17
TMEM260-215ENST00000557626 FBXO3Q9UK99 471 aa16.14■□□□□ 0.17
TMEM260-215ENST00000557626 RALYQ9UKM9 306 aaKnown RBP16.14■□□□□ 0.17
TMEM260-215ENST00000557626 PITPNM1O00562 1244 aa16.13■□□□□ 0.17
TMEM260-215ENST00000557626 VAMP4O75379 141 aa16.13■□□□□ 0.17
TMEM260-215ENST00000557626 TNFAIP2Q03169 654 aa16.13■□□□□ 0.17
TMEM260-215ENST00000557626 MKRN4PQ13434 485 aaPredicted RBP16.13■□□□□ 0.17
TMEM260-215ENST00000557626 KIAA1755Q5JYT7 1200 aa16.13■□□□□ 0.17
TMEM260-215ENST00000557626 PI16Q6UXB8 463 aa16.13■□□□□ 0.17
TMEM260-215ENST00000557626 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.13■□□□□ 0.17
TMEM260-215ENST00000557626 HMG20BQ9P0W2 317 aa16.13■□□□□ 0.17
TMEM260-215ENST00000557626 LRP2BPQ9P2M1 347 aa16.13■□□□□ 0.17
TMEM260-215ENST00000557626 SALL2Q9Y467 1007 aaPredicted RBP16.13■□□□□ 0.17
TMEM260-215ENST00000557626 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.12■□□□□ 0.17
TMEM260-215ENST00000557626 PPP4CP60510 307 aa16.12■□□□□ 0.17
TMEM260-215ENST00000557626 NAA16Q6N069 864 aaPredicted RBP16.12■□□□□ 0.17
TMEM260-215ENST00000557626 ARMCX2Q7L311 632 aa16.12■□□□□ 0.17
TMEM260-215ENST00000557626 SPICE1Q8N0Z3 855 aa16.12■□□□□ 0.17
TMEM260-215ENST00000557626 MAGEB6Q8N7X4 407 aa16.12■□□□□ 0.17
TMEM260-215ENST00000557626 SPATA5Q8NB90 893 aa16.12■□□□□ 0.17
TMEM260-215ENST00000557626 AP5M1Q9H0R1 490 aa16.12■□□□□ 0.17
TMEM260-215ENST00000557626 EHD4Q9H223 541 aa16.12■□□□□ 0.17
TMEM260-215ENST00000557626 DNAJC25-GNG10A0A024R161 153 aa16.11■□□□□ 0.17
TMEM260-215ENST00000557626 TIMM10P62072 90 aa16.11■□□□□ 0.17
TMEM260-215ENST00000557626 HNRNPUQ00839 825 aaKnown RBP eCLIP16.11■□□□□ 0.17
TMEM260-215ENST00000557626 DLX2Q07687 328 aaPredicted RBP16.11■□□□□ 0.17
TMEM260-215ENST00000557626 MVPQ14764 893 aaKnown RBP16.11■□□□□ 0.17
TMEM260-215ENST00000557626 FAM117BQ6P1L5 589 aa16.11■□□□□ 0.17
TMEM260-215ENST00000557626 WWC1Q8IX03 1113 aa16.11■□□□□ 0.17
TMEM260-215ENST00000557626 KIAA2013Q8IYS2 634 aa16.11■□□□□ 0.17
TMEM260-215ENST00000557626 CD207Q9UJ71 328 aa16.11■□□□□ 0.17
TMEM260-215ENST00000557626 TRIP12Q14669 1992 aaPredicted RBP16.1■□□□□ 0.17
TMEM260-215ENST00000557626 LOC730098B7Z3J9 87 aa16.1■□□□□ 0.17
TMEM260-215ENST00000557626 MPHOSPH10O00566 681 aaKnown RBP16.1■□□□□ 0.17
TMEM260-215ENST00000557626 PDGFBP01127 241 aaPredicted RBP16.1■□□□□ 0.17
TMEM260-215ENST00000557626 IL15P40933 162 aaPredicted RBP16.1■□□□□ 0.17
TMEM260-215ENST00000557626 CTC1Q2NKJ3 1217 aa16.1■□□□□ 0.17
TMEM260-215ENST00000557626 EPC2Q52LR7 807 aa16.1■□□□□ 0.17
TMEM260-215ENST00000557626 XAGE2Q96GT9 111 aa16.1■□□□□ 0.17
TMEM260-215ENST00000557626 ZNF214Q9UL59 606 aaPredicted RBP16.1■□□□□ 0.17
TMEM260-215ENST00000557626 ADAMTS5Q9UNA0 930 aa16.1■□□□□ 0.17
TMEM260-215ENST00000557626 GNEQ9Y223 722 aaKnown RBP16.1■□□□□ 0.17
TMEM260-215ENST00000557626 ATG2AQ2TAZ0 1938 aa16.09■□□□□ 0.17
TMEM260-215ENST00000557626 DYNC1LI2O43237 492 aaPredicted RBP16.09■□□□□ 0.17
TMEM260-215ENST00000557626 SHMT1P34896 483 aa16.09■□□□□ 0.17
TMEM260-215ENST00000557626 GPM6BQ13491 265 aa16.09■□□□□ 0.17
TMEM260-215ENST00000557626 BFSP2Q13515 415 aa16.09■□□□□ 0.17
TMEM260-215ENST00000557626 CBX2Q14781 532 aaPredicted RBP16.09■□□□□ 0.17
TMEM260-215ENST00000557626 GPR179Q6PRD1 2367 aa16.09■□□□□ 0.17
TMEM260-215ENST00000557626 H3BNC9 293 aa16.08■□□□□ 0.16
TMEM260-215ENST00000557626 VWA5AO00534 786 aa16.08■□□□□ 0.16
TMEM260-215ENST00000557626 WDR46O15213 610 aaKnown RBP16.08■□□□□ 0.16
TMEM260-215ENST00000557626 LRRFIP1Q32MZ4 808 aaKnown RBP16.08■□□□□ 0.16
TMEM260-215ENST00000557626 CCDC144CPQ8IYA2 1237 aa16.08■□□□□ 0.16
TMEM260-215ENST00000557626 RIPOR3Q96MK2 946 aa16.08■□□□□ 0.16
TMEM260-215ENST00000557626 SAMD11Q96NU1 681 aa16.08■□□□□ 0.16
TMEM260-215ENST00000557626 KATNBL1Q9H079 304 aa16.08■□□□□ 0.16
TMEM260-215ENST00000557626 DLL3Q9NYJ7 618 aa16.08■□□□□ 0.16
TMEM260-215ENST00000557626 INSL6Q9Y581 213 aa16.08■□□□□ 0.16
TMEM260-215ENST00000557626 NLRC5Q86WI3 1866 aa16.08■□□□□ 0.16
TMEM260-215ENST00000557626 TBX10O75333 385 aa16.07■□□□□ 0.16
TMEM260-215ENST00000557626 MCAMP43121 646 aa16.07■□□□□ 0.16
TMEM260-215ENST00000557626 FAM47CQ5HY64 1035 aa16.07■□□□□ 0.16
TMEM260-215ENST00000557626 CNKSR3Q6P9H4 555 aa16.07■□□□□ 0.16
TMEM260-215ENST00000557626 ADGRA1Q86SQ6 560 aa16.07■□□□□ 0.16
TMEM260-215ENST00000557626 YTHDC1Q96MU7 727 aaKnown RBP16.07■□□□□ 0.16
TMEM260-215ENST00000557626 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
TMEM260-215ENST00000557626 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
TMEM260-215ENST00000557626 PTGS1P23219 599 aa16.06■□□□□ 0.16
TMEM260-215ENST00000557626 SNRNP48Q6IEG0 339 aaKnown RBP16.06■□□□□ 0.16
TMEM260-215ENST00000557626 TTC6Q86TZ1 520 aa16.06■□□□□ 0.16
TMEM260-215ENST00000557626 TMEM105Q8N8V8 129 aa16.06■□□□□ 0.16
TMEM260-215ENST00000557626 KCNG4Q8TDN1 519 aa16.06■□□□□ 0.16
TMEM260-215ENST00000557626 FGD4Q96M96 766 aa16.06■□□□□ 0.16
TMEM260-215ENST00000557626 SH2D4AQ9H788 454 aa16.06■□□□□ 0.16
TMEM260-215ENST00000557626 VCPKMTQ9H867 229 aa16.06■□□□□ 0.16
TMEM260-215ENST00000557626 ZBED9Q6R2W3 1325 aa16.05■□□□□ 0.16
TMEM260-215ENST00000557626 ABHD14A-ACY1A0A1B0GW23 586 aa16.05■□□□□ 0.16
TMEM260-215ENST00000557626 EFCAB14O75071 495 aa16.05■□□□□ 0.16
TMEM260-215ENST00000557626 USP5P45974 858 aa16.05■□□□□ 0.16
TMEM260-215ENST00000557626 HYAL1Q12794 435 aa16.05■□□□□ 0.16
TMEM260-215ENST00000557626 REPS2Q8NFH8 660 aa16.05■□□□□ 0.16
TMEM260-215ENST00000557626 TEX13BQ9BXU2 312 aa16.05■□□□□ 0.16
TMEM260-215ENST00000557626 ARHGEF10LQ9HCE6 1279 aa16.05■□□□□ 0.16
TMEM260-215ENST00000557626 PPP1R9AQ9ULJ8 1098 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms