RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 A0A1W2PQU0 124 aa6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 TPD52L2O43399 206 aaKnown RBP6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 CTSBP07858 339 aa6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 ETF1P62495 437 aaKnown RBP6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 HNRNPUQ00839 825 aaKnown RBP eCLIP6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 CCDC146Q8IYE0 955 aa6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 ATL2Q8NHH9 583 aa6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 TTC9Q92623 222 aa6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 KISS1RQ969F8 398 aaPredicted RBP6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 NRSN2Q9GZP1 204 aa6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 ARHGEF4Q9NR80 690 aa6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 MRPS23Q9Y3D9 190 aaKnown RBP6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 NUP153P49790 1475 aaKnown RBP6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 GPATCH8Q9UKJ3 1502 aaKnown RBP6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 ADAMTS7Q9UKP4 1686 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 ALG1L2C9J202 215 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 PLD2O14939 933 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 EIF4EBP3O60516 100 aaPredicted RBP6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 CCNFP41002 786 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 RAC1P63000 192 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 YOD1Q5VVQ6 348 aaPredicted RBP6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 CNNM4Q6P4Q7 775 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 RNF180Q86T96 592 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 TXNRD3Q86VQ6 643 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 FAM13CQ8NE31 585 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 PPP1R14AQ96A00 147 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 ACSF2Q96CM8 615 aaPredicted RBP6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 CLUHP3Q96NS8 147 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 RUSC1Q9BVN2 902 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 SSBP4Q9BWG4 385 aaPredicted RBP6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 CARD10Q9BWT7 1032 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 PICK1Q9NRD5 415 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 LRP2BPQ9P2M1 347 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 ADAM30Q9UKF2 790 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 MYO5CQ9NQX4 1742 aa6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 SPAG9O60271 1321 aaKnown RBP6.5□□□□□ -1.37
MTHFD1-216ENST00000557539 SPTBN5Q9NRC6 3674 aaKnown RBP6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 TRBV23-1A0A0A0MS06 115 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 TRAV20A0A0B4J274 112 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 LOC102724159A0A0B4J2E5 919 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 GSG1L2A8MUP6 293 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 FSCN2O14926 492 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 TP53P04637 393 aaPredicted RBP6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 POLD1P28340 1107 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 TBX4P57082 545 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 HSP90AA2PQ14568 343 aaPredicted RBP6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 PWP2Q15269 919 aaKnown RBP6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 SLC15A2Q16348 729 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 BBS9Q3SYG4 887 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 FNDC3BQ53EP0 1204 aaKnown RBP6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 ZMYM1Q5SVZ6 1142 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 TDRD10Q5VZ19 366 aaKnown RBP6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 WWC2Q6AWC2 1192 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 WDR75Q8IWA0 830 aaKnown RBP6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 PHACTR4Q8IZ21 702 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 WNT8BQ93098 351 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 APBA2Q99767 749 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 TARS2Q9BW92 718 aaKnown RBP6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 USP26Q9BXU7 913 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 MYH16Q9H6N6 1097 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 OSGEPQ9NPF4 335 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 MAPRE3Q9UPY8 281 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 USP32Q8NFA0 1604 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 CICQ96RK0 1608 aaPredicted RBP6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 PRAG1Q86YV5 1406 aa6.49□□□□□ -1.37
MTHFD1-216ENST00000557539 PLXNC1O60486 1568 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 TMEM2Q9UHN6 1383 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 ANKRD34BA5PLL1 514 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 PRC1O43663 620 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 DEAF1O75398 565 aaPredicted RBP6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 ALDH1L1O75891 902 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 NAT2P11245 290 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 SDSP20132 328 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 PMLP29590 882 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 YARSP54577 528 aaKnown RBP6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 NLRP12P59046 1061 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 KIF4BQ2VIQ3 1234 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 ZC3H12AQ5D1E8 599 aaKnown RBP6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 AKAP4Q5JQC9 854 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 PRSS36Q5K4E3 855 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 LRRTM3Q86VH5 581 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 PPFIBP1Q86W92 1011 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 FBXO11Q86XK2 927 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 CCAR1Q8IX12 1150 aaKnown RBP6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 TSR2Q969E8 191 aaKnown RBP6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 DHRS1Q96LJ7 313 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 SLC6A18Q96N87 628 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 AARSD1Q9BTE6 412 aaKnown RBP6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 WNT10AQ9GZT5 417 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 MAGEC2Q9UBF1 373 aaPredicted RBP6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 SAMD9Q5K651 1589 aa6.48□□□□□ -1.37
MTHFD1-216ENST00000557539 EPHX1P07099 455 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 SLFN14P0C7P3 912 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 GUCY2FP51841 1108 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 ZNF143P52747 638 aaPredicted RBP6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 PMS1P54277 932 aaKnown RBP6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 PPP2R2AP63151 447 aa6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 NRG1Q02297 640 aaPredicted RBP6.47□□□□□ -1.37
MTHFD1-216ENST00000557539 PPM1JQ5JR12 505 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms