RNA–Protein interactions for RNA: ENST00000557512.5

CGRRF1-208, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 3

Gene CGRRF1, Length 901 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-208ENST00000557512 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.16■□□□□ 0.18
CGRRF1-208ENST00000557512 POP1Q99575 1024 aaKnown RBP16.16■□□□□ 0.18
CGRRF1-208ENST00000557512 TEX13BQ9BXU2 312 aa16.16■□□□□ 0.18
CGRRF1-208ENST00000557512 AP5M1Q9H0R1 490 aa16.16■□□□□ 0.18
CGRRF1-208ENST00000557512 ARHGEF10LQ9HCE6 1279 aa16.16■□□□□ 0.18
CGRRF1-208ENST00000557512 PIH1D3Q9NQM4 214 aaKnown RBP16.16■□□□□ 0.18
CGRRF1-208ENST00000557512 FAM186AA6NE01 2351 aa16.16■□□□□ 0.18
CGRRF1-208ENST00000557512 COL4A6Q14031 1691 aa16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 COL11A1P12107 1806 aaPredicted RBP16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 KMT2BQ9UMN6 2715 aaPredicted RBP16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 MED19A0JLT2 244 aaPredicted RBP16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 H0Y858 1186 aa16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 GJB5O95377 273 aa16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 CACNB1Q02641 598 aaPredicted RBP16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 C17orf80Q9BSJ5 609 aa16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 SH2D4AQ9H788 454 aa16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 TLR9Q9NR96 1032 aa16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 MYH1P12882 1939 aa16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 PARP14Q460N5 1801 aa16.15■□□□□ 0.18
CGRRF1-208ENST00000557512 POLR3DP05423 398 aaPredicted RBP16.14■□□□□ 0.17
CGRRF1-208ENST00000557512 SMPD1P17405 629 aa16.14■□□□□ 0.17
CGRRF1-208ENST00000557512 LTBRP36941 435 aa16.14■□□□□ 0.17
CGRRF1-208ENST00000557512 ICA1Q05084 483 aa16.14■□□□□ 0.17
CGRRF1-208ENST00000557512 TCEAL5Q5H9L2 206 aa16.14■□□□□ 0.17
CGRRF1-208ENST00000557512 TMEM63BQ5T3F8 832 aa16.14■□□□□ 0.17
CGRRF1-208ENST00000557512 RETREG2Q8NC44 543 aa16.14■□□□□ 0.17
CGRRF1-208ENST00000557512 BANK1Q8NDB2 785 aa16.14■□□□□ 0.17
CGRRF1-208ENST00000557512 FBXO22Q8NEZ5 403 aa16.14■□□□□ 0.17
CGRRF1-208ENST00000557512 FSD1Q9BTV5 496 aa16.14■□□□□ 0.17
CGRRF1-208ENST00000557512 CTNNA3Q9UI47 895 aa16.14■□□□□ 0.17
CGRRF1-208ENST00000557512 PLXNA3P51805 1871 aa16.14■□□□□ 0.17
CGRRF1-208ENST00000557512 ZXDAP98168 799 aa16.13■□□□□ 0.17
CGRRF1-208ENST00000557512 TIGD5Q53EQ6 642 aa16.13■□□□□ 0.17
CGRRF1-208ENST00000557512 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.13■□□□□ 0.17
CGRRF1-208ENST00000557512 CERS3Q8IU89 383 aa16.13■□□□□ 0.17
CGRRF1-208ENST00000557512 CLDND1Q9NY35 253 aa16.13■□□□□ 0.17
CGRRF1-208ENST00000557512 TET1Q8NFU7 2136 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 PTPRSQ13332 1948 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 GVINP1Q7Z2Y8 2422 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 IGSF3O75054 1194 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 AKR1B1P15121 316 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 AVPR2P30518 371 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 ZAP70P43403 619 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 SLC4A3P48751 1232 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 CNTN2Q02246 1040 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 GPNMBQ14956 572 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 PTPROQ16827 1216 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 FAM83BQ5T0W9 1011 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 ANKRD35Q8N283 1001 aa16.12■□□□□ 0.17
CGRRF1-208ENST00000557512 MBTPS2O43462 519 aa16.11■□□□□ 0.17
CGRRF1-208ENST00000557512 CLUL1Q15846 466 aa16.11■□□□□ 0.17
CGRRF1-208ENST00000557512 CCDC184Q52MB2 194 aa16.11■□□□□ 0.17
CGRRF1-208ENST00000557512 TTC39AQ5SRH9 613 aa16.11■□□□□ 0.17
CGRRF1-208ENST00000557512 PPP1R13LQ8WUF5 828 aa16.11■□□□□ 0.17
CGRRF1-208ENST00000557512 PDGFCQ9NRA1 345 aa16.11■□□□□ 0.17
CGRRF1-208ENST00000557512 Q9Y3F1 56 aa16.11■□□□□ 0.17
CGRRF1-208ENST00000557512 KMT2EQ8IZD2 1858 aa16.11■□□□□ 0.17
CGRRF1-208ENST00000557512 NCOR2Q9Y618 2525 aa16.1■□□□□ 0.17
CGRRF1-208ENST00000557512 MCM3APO60318 1980 aa16.1■□□□□ 0.17
CGRRF1-208ENST00000557512 SRGAP3O43295 1099 aa16.1■□□□□ 0.17
CGRRF1-208ENST00000557512 DLX2Q07687 328 aaPredicted RBP16.1■□□□□ 0.17
CGRRF1-208ENST00000557512 TCTN1Q2MV58 587 aa16.1■□□□□ 0.17
CGRRF1-208ENST00000557512 RPAINQ86UA6 219 aa16.1■□□□□ 0.17
CGRRF1-208ENST00000557512 CPXCR1Q8N123 301 aa16.1■□□□□ 0.17
CGRRF1-208ENST00000557512 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
CGRRF1-208ENST00000557512 DDX49Q9Y6V7 483 aaKnown RBP16.1■□□□□ 0.17
CGRRF1-208ENST00000557512 RBAK-RBAKDNI3L0D1 243 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 STXBP3O00186 592 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 ATP2A1O14983 1001 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 IDH1O75874 414 aaKnown RBP16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 EEF2P13639 858 aaKnown RBP16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 NBL1P41271 181 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 PURAQ00577 322 aaKnown RBP16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 BFSP2Q13515 415 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 CTC1Q2NKJ3 1217 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 FAM47CQ5HY64 1035 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 FAM117BQ6P1L5 589 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 SSH1Q8WYL5 1049 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 ASIC4Q96FT7 647 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 CNTNAP3BQ96NU0 1288 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 SLF1Q9BQI6 1058 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 RIOK1Q9BRS2 568 aaKnown RBP16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 CNTNAP3Q9BZ76 1288 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 NSUN3Q9H649 340 aaKnown RBP16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 MCM9Q9NXL9 1143 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 DMXL1Q9Y485 3027 aa16.09■□□□□ 0.17
CGRRF1-208ENST00000557512 CFAP47Q6ZTR5 3102 aa16.08■□□□□ 0.17
CGRRF1-208ENST00000557512 CYP2D6P10635 497 aa16.08■□□□□ 0.16
CGRRF1-208ENST00000557512 NBPF20Q3BBV1 942 aa16.08■□□□□ 0.16
CGRRF1-208ENST00000557512 EPC2Q52LR7 807 aa16.08■□□□□ 0.16
CGRRF1-208ENST00000557512 IQSEC1Q6DN90 963 aa16.08■□□□□ 0.16
CGRRF1-208ENST00000557512 TAPT1Q6NXT6 567 aa16.08■□□□□ 0.16
CGRRF1-208ENST00000557512 FAM133AQ8N9E0 248 aa16.08■□□□□ 0.16
CGRRF1-208ENST00000557512 DYNLL2Q96FJ2 89 aa16.08■□□□□ 0.16
CGRRF1-208ENST00000557512 NUP88Q99567 741 aaPredicted RBP16.08■□□□□ 0.16
CGRRF1-208ENST00000557512 DBNDD2Q9BQY9 259 aa16.08■□□□□ 0.16
CGRRF1-208ENST00000557512 HDAC5Q9UQL6 1122 aa16.08■□□□□ 0.16
CGRRF1-208ENST00000557512 SIP14410 1827 aa16.08■□□□□ 0.16
CGRRF1-208ENST00000557512 RAD21O60216 631 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms