RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 CCDC140Q96MF4 163 aa6.64□□□□□ -1.35
PRPF39-212ENST00000557477 SLC52A2Q9HAB3 445 aa6.64□□□□□ -1.35
PRPF39-212ENST00000557477 NDOR1Q9UHB4 597 aa6.64□□□□□ -1.35
PRPF39-212ENST00000557477 SFMBT1Q9UHJ3 866 aa6.64□□□□□ -1.35
PRPF39-212ENST00000557477 PRKAB1Q9Y478 270 aa6.64□□□□□ -1.35
PRPF39-212ENST00000557477 C2orf71A6NGG8 1288 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 ARNTLO00327 626 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 ESR1P03372 595 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 TM4SF20Q53R12 229 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 TRIM61Q5EBN2 209 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 TAF7LQ5H9L4 462 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 ZPBP2Q6X784 338 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 USP53Q70EK8 1073 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 CREG2Q8IUH2 290 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 PPIL6Q8IXY8 311 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 SLC7A14Q8TBB6 771 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 MFSD3Q96ES6 412 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 SPC25Q9HBM1 224 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 TRIM39Q9HCM9 518 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 AP5S1Q9NUS5 200 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 TMEFF2Q9UIK5 374 aaPredicted RBP6.63□□□□□ -1.35
PRPF39-212ENST00000557477 SNX11Q9Y5W9 270 aa6.63□□□□□ -1.35
PRPF39-212ENST00000557477 NACADO15069 1562 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 ASXL2Q76L83 1435 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 TMEM82A0PJX8 343 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 PLS3P13797 630 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 SDSP20132 328 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 CD96P40200 585 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 NOP2P46087 812 aaKnown RBP6.62□□□□□ -1.35
PRPF39-212ENST00000557477 SEPHS1P49903 392 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 GABREP78334 506 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 PTPROQ16827 1216 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 MSMPQ1L6U9 139 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 RCSD1Q6JBY9 416 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 RNF111Q6ZNA4 994 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 TMPRSS7Q7RTY8 843 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 BRAPQ7Z569 592 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 CCDC103Q8IW40 242 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 GSTCDQ8NEC7 633 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 HRASLS5Q96KN8 279 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 CLEC1BQ9P126 229 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 RNF112Q9ULX5 631 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 TRAF6Q9Y4K3 522 aa6.62□□□□□ -1.35
PRPF39-212ENST00000557477 SSU72P8A0A1W2PR75 194 aa6.61□□□□□ -1.35
PRPF39-212ENST00000557477 PPM1GO15355 546 aaPredicted RBP6.61□□□□□ -1.35
PRPF39-212ENST00000557477 KCNQ2O43526 872 aa6.61□□□□□ -1.35
PRPF39-212ENST00000557477 TEKQ02763 1124 aa6.61□□□□□ -1.35
PRPF39-212ENST00000557477 EGR3Q06889 387 aa6.61□□□□□ -1.35
PRPF39-212ENST00000557477 AOC3Q16853 763 aa6.61□□□□□ -1.35
PRPF39-212ENST00000557477 KCNT2Q6UVM3 1135 aa6.61□□□□□ -1.35
PRPF39-212ENST00000557477 FGD2Q7Z6J4 655 aa6.61□□□□□ -1.35
PRPF39-212ENST00000557477 PTPRN2Q92932 1015 aa6.61□□□□□ -1.35
PRPF39-212ENST00000557477 CDADC1Q9BWV3 514 aa6.61□□□□□ -1.35
PRPF39-212ENST00000557477 COL4A3BPQ9Y5P4 624 aa6.61□□□□□ -1.35
PRPF39-212ENST00000557477 A0A087X0B3 334 aa6.6□□□□□ -1.35
PRPF39-212ENST00000557477 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.6□□□□□ -1.35
PRPF39-212ENST00000557477 FGF10O15520 208 aaPredicted RBP6.6□□□□□ -1.35
PRPF39-212ENST00000557477 DNAJC8O75937 253 aaPredicted RBP6.6□□□□□ -1.35
PRPF39-212ENST00000557477 MYCLP1P12525 358 aaPredicted RBP6.6□□□□□ -1.35
PRPF39-212ENST00000557477 ACBD5Q5T8D3 534 aaPredicted RBP6.6□□□□□ -1.35
PRPF39-212ENST00000557477 EEF1DP3Q658K8 133 aa6.6□□□□□ -1.35
PRPF39-212ENST00000557477 STYK1Q6J9G0 422 aa6.6□□□□□ -1.35
PRPF39-212ENST00000557477 KSR1Q8IVT5 923 aa6.6□□□□□ -1.35
PRPF39-212ENST00000557477 SCLYQ96I15 445 aa6.6□□□□□ -1.35
PRPF39-212ENST00000557477 PHF20Q9BVI0 1012 aa6.6□□□□□ -1.35
PRPF39-212ENST00000557477 MEFVO15553 781 aaPredicted RBP6.59□□□□□ -1.35
PRPF39-212ENST00000557477 RASGRP1O95267 797 aa6.59□□□□□ -1.35
PRPF39-212ENST00000557477 VIL1P09327 827 aaKnown RBP6.59□□□□□ -1.35
PRPF39-212ENST00000557477 LCP1P13796 627 aa6.59□□□□□ -1.35
PRPF39-212ENST00000557477 GRIK1P39086 918 aa6.59□□□□□ -1.35
PRPF39-212ENST00000557477 PRKCQQ04759 706 aa6.59□□□□□ -1.35
PRPF39-212ENST00000557477 BNIP3Q12983 259 aa6.59□□□□□ -1.35
PRPF39-212ENST00000557477 MBLAC2Q68D91 279 aa6.59□□□□□ -1.35
PRPF39-212ENST00000557477 MAMDC2Q7Z304 686 aaPredicted RBP6.59□□□□□ -1.35
PRPF39-212ENST00000557477 THNSL2Q86YJ6 484 aa6.59□□□□□ -1.35
PRPF39-212ENST00000557477 DCAF4Q8WV16 495 aa6.59□□□□□ -1.35
PRPF39-212ENST00000557477 ASB11Q8WXH4 323 aa6.59□□□□□ -1.35
PRPF39-212ENST00000557477 PTCHD1Q96NR3 888 aa6.59□□□□□ -1.35
PRPF39-212ENST00000557477 PCDH12Q9NPG4 1184 aa6.59□□□□□ -1.35
PRPF39-212ENST00000557477 ERVK13-1Q9NX77 482 aa6.59□□□□□ -1.35
PRPF39-212ENST00000557477 FAM83GA6ND36 823 aa6.58□□□□□ -1.36
PRPF39-212ENST00000557477 PDE8AO60658 829 aa6.58□□□□□ -1.36
PRPF39-212ENST00000557477 MSCO60682 206 aa6.58□□□□□ -1.36
PRPF39-212ENST00000557477 EFCAB14O75071 495 aa6.58□□□□□ -1.36
PRPF39-212ENST00000557477 HSP90B1P14625 803 aaKnown RBP6.58□□□□□ -1.36
PRPF39-212ENST00000557477 RPL10P27635 214 aaKnown RBP6.58□□□□□ -1.36
PRPF39-212ENST00000557477 CEBPAP49715 358 aaPredicted RBP6.58□□□□□ -1.36
PRPF39-212ENST00000557477 AMPD3Q01432 767 aa6.58□□□□□ -1.36
PRPF39-212ENST00000557477 IKZF1Q13422 519 aa6.58□□□□□ -1.36
PRPF39-212ENST00000557477 ZNF460Q14592 562 aa6.58□□□□□ -1.36
PRPF39-212ENST00000557477 TESK1Q15569 626 aa6.58□□□□□ -1.36
PRPF39-212ENST00000557477 WAPLQ7Z5K2 1190 aa6.58□□□□□ -1.36
PRPF39-212ENST00000557477 TARS2Q9BW92 718 aaKnown RBP6.58□□□□□ -1.36
PRPF39-212ENST00000557477 FAM126AQ9BYI3 521 aaPredicted RBP6.58□□□□□ -1.36
PRPF39-212ENST00000557477 MAGEC2Q9UBF1 373 aaPredicted RBP6.58□□□□□ -1.36
PRPF39-212ENST00000557477 VAV3Q9UKW4 847 aa6.58□□□□□ -1.36
PRPF39-212ENST00000557477 NPFFR2Q9Y5X5 522 aa6.58□□□□□ -1.36
PRPF39-212ENST00000557477 NPHP3-ACAD11A0A0J9YXS1 232 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 GSG1L2A8MUP6 293 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 COBLO75128 1261 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms