RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 NPLOC4Q8TAT6 608 aa24.28■■□□□ 1.48
SEC23A-213ENST00000557280 RAET1EQ8TD07 263 aa24.28■■□□□ 1.48
SEC23A-213ENST00000557280 CLEC4DQ8WXI8 215 aa24.28■■□□□ 1.48
SEC23A-213ENST00000557280 ACAD9Q9H845 621 aa24.28■■□□□ 1.48
SEC23A-213ENST00000557280 LARGE1O95461 756 aa24.27■■□□□ 1.48
SEC23A-213ENST00000557280 ELNP15502 786 aa24.27■■□□□ 1.48
SEC23A-213ENST00000557280 RGS2P41220 211 aa24.27■■□□□ 1.48
SEC23A-213ENST00000557280 IRF5Q13568 498 aa24.27■■□□□ 1.48
SEC23A-213ENST00000557280 CCL14Q16627 93 aa24.27■■□□□ 1.48
SEC23A-213ENST00000557280 TKFCQ3LXA3 575 aa24.27■■□□□ 1.48
SEC23A-213ENST00000557280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.27■■□□□ 1.48
SEC23A-213ENST00000557280 FBXO11Q86XK2 927 aa24.27■■□□□ 1.48
SEC23A-213ENST00000557280 ABRAQ8N0Z2 381 aa24.27■■□□□ 1.48
SEC23A-213ENST00000557280 A1CFQ9NQ94 594 aaKnown RBP24.27■■□□□ 1.48
SEC23A-213ENST00000557280 STRNO43815 780 aa24.26■■□□□ 1.47
SEC23A-213ENST00000557280 PPFIA3O75145 1194 aa24.26■■□□□ 1.47
SEC23A-213ENST00000557280 SMARCA1P28370 1054 aa24.26■■□□□ 1.47
SEC23A-213ENST00000557280 KCTD2Q14681 263 aa24.26■■□□□ 1.47
SEC23A-213ENST00000557280 SH3TC2Q8TF17 1288 aa24.26■■□□□ 1.47
SEC23A-213ENST00000557280 APBA2Q99767 749 aa24.26■■□□□ 1.47
SEC23A-213ENST00000557280 FLRT1Q9NZU1 646 aa24.26■■□□□ 1.47
SEC23A-213ENST00000557280 FBXO40Q9UH90 709 aa24.26■■□□□ 1.47
SEC23A-213ENST00000557280 MYH6P13533 1939 aa24.25■■□□□ 1.47
SEC23A-213ENST00000557280 PNMA6FA0A0J9YX94 578 aa24.25■■□□□ 1.47
SEC23A-213ENST00000557280 ADCY3O60266 1144 aa24.25■■□□□ 1.47
SEC23A-213ENST00000557280 TRIB2Q92519 343 aa24.25■■□□□ 1.47
SEC23A-213ENST00000557280 RRP36Q96EU6 259 aaKnown RBP24.25■■□□□ 1.47
SEC23A-213ENST00000557280 ZNF274Q96GC6 653 aaPredicted RBP24.25■■□□□ 1.47
SEC23A-213ENST00000557280 AMNQ9BXJ7 453 aa24.25■■□□□ 1.47
SEC23A-213ENST00000557280 OPLAHO14841 1288 aa24.24■■□□□ 1.47
SEC23A-213ENST00000557280 NTRK3Q16288 839 aa24.24■■□□□ 1.47
SEC23A-213ENST00000557280 ANKRD35Q8N283 1001 aa24.24■■□□□ 1.47
SEC23A-213ENST00000557280 PURBQ96QR8 312 aaKnown RBP24.24■■□□□ 1.47
SEC23A-213ENST00000557280 LCTP09848 1927 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 DNAJC25-GNG10A0A024R161 153 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 DTNBO60941 627 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 HOXC6P09630 235 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 GRK4P32298 578 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 SCRN1Q12765 414 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 TRIM32Q13049 653 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 ANKRD1Q15327 319 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 ZNF792Q3KQV3 632 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 NSMFQ6X4W1 530 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 SLC30A10Q6XR72 485 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 DPP9Q86TI2 863 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 TNS4Q8IZW8 715 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 FGD4Q96M96 766 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 PCDHA1Q9Y5I3 950 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 ABCB11O95342 1321 aa24.23■■□□□ 1.47
SEC23A-213ENST00000557280 RBBP6Q7Z6E9 1792 aaKnown RBP24.22■■□□□ 1.47
SEC23A-213ENST00000557280 XRCC5P13010 732 aaKnown RBP24.22■■□□□ 1.47
SEC23A-213ENST00000557280 CNTN2Q02246 1040 aa24.22■■□□□ 1.47
SEC23A-213ENST00000557280 RABEP1Q15276 862 aa24.22■■□□□ 1.47
SEC23A-213ENST00000557280 ME3Q16798 604 aa24.22■■□□□ 1.47
SEC23A-213ENST00000557280 SLC9C1Q4G0N8 1177 aa24.22■■□□□ 1.47
SEC23A-213ENST00000557280 TBC1D5Q92609 795 aa24.22■■□□□ 1.47
SEC23A-213ENST00000557280 PHKBQ93100 1093 aa24.22■■□□□ 1.47
SEC23A-213ENST00000557280 CYP39A1Q9NYL5 469 aa24.22■■□□□ 1.47
SEC23A-213ENST00000557280 PNMA2Q9UL42 364 aa24.22■■□□□ 1.47
SEC23A-213ENST00000557280 CENPFP49454 3210 aa24.22■■□□□ 1.47
SEC23A-213ENST00000557280 ZNFX1Q9P2E3 1918 aaKnown RBP24.22■■□□□ 1.47
SEC23A-213ENST00000557280 ASTN1O14525 1302 aa24.21■■□□□ 1.47
SEC23A-213ENST00000557280 CCDC196A0A1B0GTZ2 297 aa24.21■■□□□ 1.47
SEC23A-213ENST00000557280 PPP2R5BQ15173 497 aa24.21■■□□□ 1.47
SEC23A-213ENST00000557280 NECAB1Q8N987 351 aa24.21■■□□□ 1.47
SEC23A-213ENST00000557280 SLAIN1Q8ND83 568 aa24.21■■□□□ 1.47
SEC23A-213ENST00000557280 PXYLP1Q8TE99 480 aa24.21■■□□□ 1.47
SEC23A-213ENST00000557280 GPKOWQ92917 476 aaPredicted RBP eCLIP24.21■■□□□ 1.47
SEC23A-213ENST00000557280 DDX11Q96FC9 970 aa24.21■■□□□ 1.47
SEC23A-213ENST00000557280 MAML3Q96JK9 1138 aa24.21■■□□□ 1.47
SEC23A-213ENST00000557280 SEC63Q9UGP8 760 aaKnown RBP24.21■■□□□ 1.47
SEC23A-213ENST00000557280 V9GY48 417 aaPredicted RBP24.21■■□□□ 1.47
SEC23A-213ENST00000557280 PLXNA1Q9UIW2 1896 aa24.21■■□□□ 1.47
SEC23A-213ENST00000557280 PFKFB2O60825 505 aa24.2■■□□□ 1.46
SEC23A-213ENST00000557280 CD2BP2O95400 341 aaKnown RBP24.2■■□□□ 1.46
SEC23A-213ENST00000557280 IGHA2P01877 340 aa24.2■■□□□ 1.46
SEC23A-213ENST00000557280 ST3GAL1Q11201 340 aa24.2■■□□□ 1.46
SEC23A-213ENST00000557280 BAATQ14032 418 aaPredicted RBP24.2■■□□□ 1.46
SEC23A-213ENST00000557280 DDX49Q9Y6V7 483 aaKnown RBP24.2■■□□□ 1.46
SEC23A-213ENST00000557280 PFASO15067 1338 aa24.19■■□□□ 1.46
SEC23A-213ENST00000557280 PTPDC1A2A3K4 754 aa24.19■■□□□ 1.46
SEC23A-213ENST00000557280 MYCP01106 439 aaPredicted RBP24.19■■□□□ 1.46
SEC23A-213ENST00000557280 INHAP05111 366 aa24.19■■□□□ 1.46
SEC23A-213ENST00000557280 WWC2Q6AWC2 1192 aa24.19■■□□□ 1.46
SEC23A-213ENST00000557280 FAM133AQ8N9E0 248 aa24.19■■□□□ 1.46
SEC23A-213ENST00000557280 ARMC5Q96C12 935 aa24.19■■□□□ 1.46
SEC23A-213ENST00000557280 ABHD8Q96I13 439 aa24.19■■□□□ 1.46
SEC23A-213ENST00000557280 SLKQ9H2G2 1235 aaPredicted RBP24.19■■□□□ 1.46
SEC23A-213ENST00000557280 MRPL11Q9Y3B7 192 aaKnown RBP24.19■■□□□ 1.46
SEC23A-213ENST00000557280 SOWAHBA6NEL2 793 aa24.18■■□□□ 1.46
SEC23A-213ENST00000557280 POTEB2H3BUK9 544 aa24.18■■□□□ 1.46
SEC23A-213ENST00000557280 HMGCRP04035 888 aa24.18■■□□□ 1.46
SEC23A-213ENST00000557280 IFNAR1P17181 557 aa24.18■■□□□ 1.46
SEC23A-213ENST00000557280 CALML3P27482 149 aa24.18■■□□□ 1.46
SEC23A-213ENST00000557280 RPS6P62753 249 aaKnown RBP24.18■■□□□ 1.46
SEC23A-213ENST00000557280 TYW1BQ6NUM6 668 aa24.18■■□□□ 1.46
SEC23A-213ENST00000557280 RNF207Q6ZRF8 634 aa24.18■■□□□ 1.46
SEC23A-213ENST00000557280 HEATR3Q7Z4Q2 680 aa24.18■■□□□ 1.46
SEC23A-213ENST00000557280 ZNF333Q96JL9 665 aa24.18■■□□□ 1.46
SEC23A-213ENST00000557280 SLC26A6Q9BXS9 759 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms