RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PDE4DQ08499 809 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 KCNB1Q14721 858 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 CCDC178Q5BJE1 867 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 ACSBG1Q96GR2 724 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 KAT14Q9H8E8 782 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 CCDC87Q9NVE4 849 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 PCDHA6Q9UN73 950 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 PCDHA8Q9Y5H6 950 aa12.73□□□□□ -0.37
SRP54-213ENST00000556994 TARSL2A2RTX5 802 aaKnown RBP12.72□□□□□ -0.37
SRP54-213ENST00000556994 ORC4O43929 436 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 USP17L8P0C7I0 530 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 MCM3P25205 808 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 PRDX5P30044 214 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 CXCR5P32302 372 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 SLC7A5Q01650 507 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 CKAP4Q07065 602 aaKnown RBP12.72□□□□□ -0.37
SRP54-213ENST00000556994 CCDC96Q2M329 555 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 FKBP15Q5T1M5 1219 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 HEATR3Q7Z4Q2 680 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 ANKRD18AQ8IVF6 992 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 RRP36Q96EU6 259 aaKnown RBP12.72□□□□□ -0.37
SRP54-213ENST00000556994 NOC4LQ9BVI4 516 aaKnown RBP12.72□□□□□ -0.37
SRP54-213ENST00000556994 MLXIPQ9HAP2 919 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 KBTBD4Q9NVX7 518 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 TFCP2L1Q9NZI6 479 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 EHD2Q9NZN4 543 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 EXOC5O00471 708 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 PLCG1P19174 1290 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 ZBED6P86452 979 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 TFAP4Q01664 338 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 KIF5AQ12840 1032 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 SLC35G1Q2M3R5 365 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 SECISBP2LQ93073 1101 aaKnown RBP12.72□□□□□ -0.37
SRP54-213ENST00000556994 DYNLL2Q96FJ2 89 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 LRRC1Q9BTT6 524 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 EHD4Q9H223 541 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 CPVLQ9H3G5 476 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 IL17RBQ9NRM6 502 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 MCM9Q9NXL9 1143 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 DMGDHQ9UI17 866 aaKnown RBP12.72□□□□□ -0.37
SRP54-213ENST00000556994 MINPP1Q9UNW1 487 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 CAPN6Q9Y6Q1 641 aa12.72□□□□□ -0.37
SRP54-213ENST00000556994 MOCS3O95396 460 aa12.71□□□□□ -0.37
SRP54-213ENST00000556994 KIF5BP33176 963 aa12.71□□□□□ -0.37
SRP54-213ENST00000556994 ASIC1P78348 528 aa12.71□□□□□ -0.37
SRP54-213ENST00000556994 TXNRD1Q16881 649 aa12.71□□□□□ -0.37
SRP54-213ENST00000556994 ERFEQ4G0M1 354 aa12.71□□□□□ -0.37
SRP54-213ENST00000556994 PARP10Q53GL7 1025 aa12.71□□□□□ -0.37
SRP54-213ENST00000556994 MIIPQ5JXC2 388 aa12.71□□□□□ -0.37
SRP54-213ENST00000556994 PACS2Q86VP3 889 aa12.71□□□□□ -0.37
SRP54-213ENST00000556994 PNMA1Q8ND90 353 aa12.71□□□□□ -0.37
SRP54-213ENST00000556994 P2RX5Q93086 422 aa12.71□□□□□ -0.37
SRP54-213ENST00000556994 CCDC42Q96M95 316 aa12.71□□□□□ -0.37
SRP54-213ENST00000556994 CRNKL1Q9BZJ0 848 aaKnown RBP12.71□□□□□ -0.37
SRP54-213ENST00000556994 USP17L3A6NCW0 530 aa12.71□□□□□ -0.38
SRP54-213ENST00000556994 USP17L4A6NCW7 530 aa12.71□□□□□ -0.38
SRP54-213ENST00000556994 NUTM2BA6NNL0 878 aaPredicted RBP12.71□□□□□ -0.38
SRP54-213ENST00000556994 NUTM2EB1AL46 878 aaPredicted RBP12.71□□□□□ -0.38
SRP54-213ENST00000556994 EPHB6O15197 1021 aa12.71□□□□□ -0.38
SRP54-213ENST00000556994 PPFIA4O75335 1185 aa12.71□□□□□ -0.38
SRP54-213ENST00000556994 GOLGA8HP0CJ92 632 aa12.71□□□□□ -0.38
SRP54-213ENST00000556994 PCP11498 1178 aaKnown RBP12.71□□□□□ -0.38
SRP54-213ENST00000556994 UBE4AQ14139 1066 aa12.71□□□□□ -0.38
SRP54-213ENST00000556994 TTC19Q6DKK2 380 aaPredicted RBP12.71□□□□□ -0.38
SRP54-213ENST00000556994 SND1Q7KZF4 910 aaKnown RBP eCLIP12.71□□□□□ -0.388e-6■□□□□ 9.2
SRP54-213ENST00000556994 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.38
SRP54-213ENST00000556994 CREG2Q8IUH2 290 aa12.71□□□□□ -0.38
SRP54-213ENST00000556994 CCDC170Q8IYT3 715 aa12.71□□□□□ -0.38
SRP54-213ENST00000556994 CELF1Q92879 486 aaKnown RBP12.71□□□□□ -0.38
SRP54-213ENST00000556994 RPGRIP1Q96KN7 1286 aa12.71□□□□□ -0.38
SRP54-213ENST00000556994 MYH10P35580 1976 aa12.71□□□□□ -0.38
SRP54-213ENST00000556994 GOLGA6BA6NDN3 693 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 M0R2N6 131 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 CYTH3O43739 400 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 CCNE1P24864 410 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 MAGEA9P43362 315 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 NOP2P46087 812 aaKnown RBP12.7□□□□□ -0.38
SRP54-213ENST00000556994 VAV2P52735 878 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 SPA17Q15506 151 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 BICDL1Q6ZP65 573 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 CABP7Q86V35 215 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 C2CD5Q86YS7 1000 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 ANKRD13CQ8N6S4 541 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 DHTKD1Q96HY7 919 aaPredicted RBP12.7□□□□□ -0.38
SRP54-213ENST00000556994 PURBQ96QR8 312 aaKnown RBP12.7□□□□□ -0.38
SRP54-213ENST00000556994 NUP58Q9BVL2 599 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 TRIM9Q9C026 710 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 SLC39A2Q9NP94 309 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 FAM207AQ9NSI2 230 aaPredicted RBP12.7□□□□□ -0.38
SRP54-213ENST00000556994 DLEC1Q9Y238 1755 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 GOLGA6CA6NDK9 693 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 CCNT1O60563 726 aaKnown RBP12.7□□□□□ -0.38
SRP54-213ENST00000556994 GOLGA6DP0CG33 693 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 CORO7P57737 925 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 ATP2B2Q01814 1243 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 ITPK1Q13572 414 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 LETM2Q2VYF4 491 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 NFRKBQ6P4R8 1299 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 ZNF662Q6ZS27 426 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms