RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 GRM4Q14833 912 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 SART3Q15020 963 aaKnown RBP12.11□□□□□ -0.47
SNX6-208ENST00000556712 SLC35G1Q2M3R5 365 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 QRICH1Q2TAL8 776 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 PRPF38BQ5VTL8 546 aaKnown RBP12.11□□□□□ -0.47
SNX6-208ENST00000556712 ARMCX2Q7L311 632 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 NECAB2Q7Z6G3 386 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 RAB11FIP4Q86YS3 637 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 CCDC144CPQ8IYA2 1237 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 IGDCC4Q8TDY8 1250 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 CLEC4DQ8WXI8 215 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 DPF3Q92784 378 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 C11orf49Q9H6J7 331 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 VAT1LQ9HCJ6 419 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
SNX6-208ENST00000556712 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 WDR19Q8NEZ3 1342 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 SYNGAP1Q96PV0 1343 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 PTPDC1A2A3K4 754 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 SH2B2O14492 632 aaPredicted RBP12.1□□□□□ -0.47
SNX6-208ENST00000556712 ADCY6O43306 1168 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 MSCO60682 206 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 BAATQ14032 418 aaPredicted RBP12.1□□□□□ -0.47
SNX6-208ENST00000556712 ADCK5Q3MIX3 580 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 GJC2Q5T442 439 aaPredicted RBP12.1□□□□□ -0.47
SNX6-208ENST00000556712 ERICH6BQ5W0A0 696 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 MAMDC4Q6UXC1 1216 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 ZNF467Q7Z7K2 595 aaPredicted RBP12.1□□□□□ -0.47
SNX6-208ENST00000556712 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 NUP133Q8WUM0 1156 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 TCEANC2Q96MN5 208 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 HTATIP2Q9BUP3 242 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 CNPY2Q9Y2B0 182 aa12.1□□□□□ -0.47
SNX6-208ENST00000556712 BAZ2BQ9UIF8 2168 aaKnown RBP12.1□□□□□ -0.47
SNX6-208ENST00000556712 PALM3A6NDB9 673 aaPredicted RBP12.09□□□□□ -0.47
SNX6-208ENST00000556712 RXRAP19793 462 aa12.09□□□□□ -0.47
SNX6-208ENST00000556712 CALML3P27482 149 aa12.09□□□□□ -0.47
SNX6-208ENST00000556712 MCM5P33992 734 aa12.09□□□□□ -0.47
SNX6-208ENST00000556712 TROAPQ12815 778 aa12.09□□□□□ -0.47
SNX6-208ENST00000556712 RNF20Q5VTR2 975 aa12.09□□□□□ -0.47
SNX6-208ENST00000556712 NFXL1Q6ZNB6 911 aa12.09□□□□□ -0.47
SNX6-208ENST00000556712 CATIPQ7Z7H3 387 aa12.09□□□□□ -0.47
SNX6-208ENST00000556712 HOMER1Q86YM7 354 aa12.09□□□□□ -0.47
SNX6-208ENST00000556712 FBXO16Q8IX29 292 aaPredicted RBP12.09□□□□□ -0.47
SNX6-208ENST00000556712 ZNF654Q8IZM8 581 aa12.09□□□□□ -0.47
SNX6-208ENST00000556712 NRBP1Q9UHY1 535 aa12.09□□□□□ -0.47
SNX6-208ENST00000556712 H0YGN5 161 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 CYTH3O43739 400 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 PPP1R11O60927 126 aaPredicted RBP12.08□□□□□ -0.48
SNX6-208ENST00000556712 PGK1P00558 417 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 RARBP10826 455 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 COL6A1P12109 1028 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 AKR1A1P14550 325 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 CPA1P15085 419 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 PTGS1P23219 599 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
SNX6-208ENST00000556712 ACVR2BQ13705 512 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 RNF207Q6ZRF8 634 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 EEPD1Q7L9B9 569 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 C7orf61Q8IZ16 206 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 MSL3Q8N5Y2 521 aaKnown RBP12.08□□□□□ -0.48
SNX6-208ENST00000556712 PIBF1Q8WXW3 757 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 TMEM87BQ96K49 555 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 PIGSQ96S52 555 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 KATNBL1Q9H079 304 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 XPNPEP3Q9NQH7 507 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 ABCB11O95342 1321 aa12.08□□□□□ -0.48
SNX6-208ENST00000556712 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.07□□□□□ -0.48
SNX6-208ENST00000556712 MYADML2A6NDP7 307 aa12.07□□□□□ -0.48
SNX6-208ENST00000556712 CCDC69A6NI79 296 aa12.07□□□□□ -0.48
SNX6-208ENST00000556712 DNM1LO00429 736 aa12.07□□□□□ -0.48
SNX6-208ENST00000556712 PLEKHA8P1O95397 391 aa12.07□□□□□ -0.48
SNX6-208ENST00000556712 CAPN2P17655 700 aa12.07□□□□□ -0.48
SNX6-208ENST00000556712 ALDH5A1P51649 535 aaPredicted RBP12.07□□□□□ -0.48
SNX6-208ENST00000556712 RPS6P62753 249 aaKnown RBP12.07□□□□□ -0.48
SNX6-208ENST00000556712 LRRC41Q15345 812 aa12.07□□□□□ -0.48
SNX6-208ENST00000556712 FBXO11Q86XK2 927 aa12.07□□□□□ -0.48
SNX6-208ENST00000556712 TBC1D5Q92609 795 aa12.07□□□□□ -0.48
SNX6-208ENST00000556712 NEK1Q96PY6 1258 aa12.07□□□□□ -0.48
SNX6-208ENST00000556712 SENP6Q9GZR1 1112 aaPredicted RBP12.07□□□□□ -0.48
SNX6-208ENST00000556712 ABHD16BQ9H3Z7 469 aa12.07□□□□□ -0.48
SNX6-208ENST00000556712 SYNRGQ9UMZ2 1314 aa12.07□□□□□ -0.48
SNX6-208ENST00000556712 ASB14A6NK59 587 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 KBTBD13C9JR72 458 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 ZBTB5O15062 677 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 EVI5O60447 810 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 ADAMTS4O75173 837 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 DDAH1O94760 285 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 ADCYAP1R1P41586 468 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 ATN1P54259 1190 aaPredicted RBP12.06□□□□□ -0.48
SNX6-208ENST00000556712 LRRC26Q2I0M4 334 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 CCDC144BQ3MJ40 725 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 TMEM63BQ5T3F8 832 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 MICU3Q86XE3 530 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 CMTR1Q8N1G2 835 aaKnown RBP12.06□□□□□ -0.48
SNX6-208ENST00000556712 CTCFLQ8NI51 663 aaPredicted RBP12.06□□□□□ -0.48
SNX6-208ENST00000556712 FERMT2Q96AC1 680 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 MTMR8Q96EF0 704 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms