RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 A1CFQ9NQ94 594 aaKnown RBP28.57■■■□□ 2.16
SDR39U1-221ENST00000556707 BRPF3Q9ULD4 1205 aa28.57■■■□□ 2.16
SDR39U1-221ENST00000556707 CYTH3O43739 400 aa28.56■■■□□ 2.16
SDR39U1-221ENST00000556707 LCTP09848 1927 aa28.56■■■□□ 2.16
SDR39U1-221ENST00000556707 SOX10P56693 466 aa28.56■■■□□ 2.16
SDR39U1-221ENST00000556707 MICU3Q86XE3 530 aa28.56■■■□□ 2.16
SDR39U1-221ENST00000556707 RAB11FIP4Q86YS3 637 aa28.56■■■□□ 2.16
SDR39U1-221ENST00000556707 FANCBQ8NB91 859 aa28.56■■■□□ 2.16
SDR39U1-221ENST00000556707 LZTS2Q9BRK4 669 aa28.56■■■□□ 2.16
SDR39U1-221ENST00000556707 AGXT2Q9BYV1 514 aa28.56■■■□□ 2.16
SDR39U1-221ENST00000556707 UNC93B1Q9H1C4 597 aa28.56■■■□□ 2.16
SDR39U1-221ENST00000556707 CYP46A1Q9Y6A2 500 aa28.56■■■□□ 2.16
SDR39U1-221ENST00000556707 PFASO15067 1338 aa28.55■■■□□ 2.16
SDR39U1-221ENST00000556707 PRKAR2AP13861 404 aaKnown RBP28.55■■■□□ 2.16
SDR39U1-221ENST00000556707 USH1GQ495M9 461 aa28.55■■■□□ 2.16
SDR39U1-221ENST00000556707 FBXO11Q86XK2 927 aa28.55■■■□□ 2.16
SDR39U1-221ENST00000556707 SPZ1Q9BXG8 430 aa28.55■■■□□ 2.16
SDR39U1-221ENST00000556707 RNF208Q9H0X6 261 aa28.55■■■□□ 2.16
SDR39U1-221ENST00000556707 RPTORQ8N122 1335 aa28.54■■■□□ 2.16
SDR39U1-221ENST00000556707 KLF18A0A0U1RQI7 1052 aa28.54■■■□□ 2.16
SDR39U1-221ENST00000556707 ZBTB5O15062 677 aa28.54■■■□□ 2.16
SDR39U1-221ENST00000556707 ZBTB43O43298 467 aa28.54■■■□□ 2.16
SDR39U1-221ENST00000556707 SMARCA1P28370 1054 aa28.54■■■□□ 2.16
SDR39U1-221ENST00000556707 CACNB2Q08289 660 aaPredicted RBP28.54■■■□□ 2.16
SDR39U1-221ENST00000556707 CCDC144CPQ8IYA2 1237 aa28.54■■■□□ 2.16
SDR39U1-221ENST00000556707 CLEC4DQ8WXI8 215 aa28.54■■■□□ 2.16
SDR39U1-221ENST00000556707 BRF1Q92994 677 aa28.54■■■□□ 2.16
SDR39U1-221ENST00000556707 ABCB11O95342 1321 aa28.53■■■□□ 2.16
SDR39U1-221ENST00000556707 NFIBO00712 420 aa28.53■■■□□ 2.16
SDR39U1-221ENST00000556707 CYP2C19P33261 490 aa28.53■■■□□ 2.16
SDR39U1-221ENST00000556707 RCAN1P53805 252 aa28.53■■■□□ 2.16
SDR39U1-221ENST00000556707 NSMFQ6X4W1 530 aa28.53■■■□□ 2.16
SDR39U1-221ENST00000556707 PIGSQ96S52 555 aa28.53■■■□□ 2.16
SDR39U1-221ENST00000556707 HMX1Q9NP08 348 aaPredicted RBP28.53■■■□□ 2.16
SDR39U1-221ENST00000556707 CYP39A1Q9NYL5 469 aa28.53■■■□□ 2.16
SDR39U1-221ENST00000556707 POTEFA5A3E0 1075 aa28.52■■■□□ 2.16
SDR39U1-221ENST00000556707 POTEB2H3BUK9 544 aa28.52■■■□□ 2.16
SDR39U1-221ENST00000556707 PLEKHA8P1O95397 391 aa28.52■■■□□ 2.16
SDR39U1-221ENST00000556707 APOBRQ0VD83 1088 aa28.52■■■□□ 2.16
SDR39U1-221ENST00000556707 HOMER1Q86YM7 354 aa28.52■■■□□ 2.16
SDR39U1-221ENST00000556707 SRBD1Q8N5C6 995 aaKnown RBP28.52■■■□□ 2.16
SDR39U1-221ENST00000556707 FAM133AQ8N9E0 248 aa28.52■■■□□ 2.16
SDR39U1-221ENST00000556707 IL17RAQ96F46 866 aa28.52■■■□□ 2.16
SDR39U1-221ENST00000556707 AMNQ9BXJ7 453 aa28.52■■■□□ 2.16
SDR39U1-221ENST00000556707 UPF3BQ9BZI7 483 aaKnown RBP28.52■■■□□ 2.16
SDR39U1-221ENST00000556707 BRCA2P51587 3418 aa28.52■■■□□ 2.16
SDR39U1-221ENST00000556707 GJB1P08034 283 aa28.51■■■□□ 2.15
SDR39U1-221ENST00000556707 TMTC3Q6ZXV5 915 aa28.51■■■□□ 2.15
SDR39U1-221ENST00000556707 ZNF467Q7Z7K2 595 aaPredicted RBP28.51■■■□□ 2.15
SDR39U1-221ENST00000556707 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.51■■■□□ 2.15
SDR39U1-221ENST00000556707 PAK6Q9NQU5 681 aaPredicted RBP28.51■■■□□ 2.15
SDR39U1-221ENST00000556707 RBM28Q9NW13 759 aaKnown RBP28.51■■■□□ 2.15
SDR39U1-221ENST00000556707 PNMA6FA0A0J9YX94 578 aa28.5■■■□□ 2.15
SDR39U1-221ENST00000556707 PPP1R11O60927 126 aaPredicted RBP28.5■■■□□ 2.15
SDR39U1-221ENST00000556707 CNTN2Q02246 1040 aa28.5■■■□□ 2.15
SDR39U1-221ENST00000556707 RTN1Q16799 776 aa28.5■■■□□ 2.15
SDR39U1-221ENST00000556707 MSL3Q8N5Y2 521 aaKnown RBP28.5■■■□□ 2.15
SDR39U1-221ENST00000556707 FGD4Q96M96 766 aa28.5■■■□□ 2.15
SDR39U1-221ENST00000556707 TINF2Q9BSI4 451 aa28.5■■■□□ 2.15
SDR39U1-221ENST00000556707 NAP1L2Q9ULW6 460 aaPredicted RBP28.5■■■□□ 2.15
SDR39U1-221ENST00000556707 MRPL11Q9Y3B7 192 aaKnown RBP28.5■■■□□ 2.15
SDR39U1-221ENST00000556707 GOLGA8AA7E2F4 631 aa28.49■■■□□ 2.15
SDR39U1-221ENST00000556707 GOLGA8BA8MQT2 603 aa28.49■■■□□ 2.15
SDR39U1-221ENST00000556707 TRAF1Q13077 416 aa28.49■■■□□ 2.15
SDR39U1-221ENST00000556707 BAATQ14032 418 aaPredicted RBP28.49■■■□□ 2.15
SDR39U1-221ENST00000556707 RGS22Q8NE09 1264 aa28.49■■■□□ 2.15
SDR39U1-221ENST00000556707 PTPDC1A2A3K4 754 aa28.48■■■□□ 2.15
SDR39U1-221ENST00000556707 EVCP57679 992 aa28.48■■■□□ 2.15
SDR39U1-221ENST00000556707 TOB2Q14106 344 aaPredicted RBP28.48■■■□□ 2.15
SDR39U1-221ENST00000556707 MAMDC4Q6UXC1 1216 aa28.48■■■□□ 2.15
SDR39U1-221ENST00000556707 RNF207Q6ZRF8 634 aa28.48■■■□□ 2.15
SDR39U1-221ENST00000556707 CMTR1Q8N1G2 835 aaKnown RBP28.48■■■□□ 2.15
SDR39U1-221ENST00000556707 RRP36Q96EU6 259 aaKnown RBP28.48■■■□□ 2.15
SDR39U1-221ENST00000556707 MAF1Q9H063 256 aa28.48■■■□□ 2.15
SDR39U1-221ENST00000556707 PCDHA1Q9Y5I3 950 aa28.48■■■□□ 2.15
SDR39U1-221ENST00000556707 SYNGAP1Q96PV0 1343 aa28.47■■■□□ 2.15
SDR39U1-221ENST00000556707 CYBAP13498 195 aa28.47■■■□□ 2.15
SDR39U1-221ENST00000556707 CCND3P30281 292 aaPredicted RBP28.47■■■□□ 2.15
SDR39U1-221ENST00000556707 PPP2R5BQ15173 497 aa28.47■■■□□ 2.15
SDR39U1-221ENST00000556707 PIBF1Q8WXW3 757 aa28.47■■■□□ 2.15
SDR39U1-221ENST00000556707 FAM217BQ9NTX9 383 aaPredicted RBP28.47■■■□□ 2.15
SDR39U1-221ENST00000556707 PDRG1Q9NUG6 133 aa28.47■■■□□ 2.15
SDR39U1-221ENST00000556707 FRMPD3Q5JV73 1810 aa28.47■■■□□ 2.15
SDR39U1-221ENST00000556707 SOWAHBA6NEL2 793 aa28.46■■■□□ 2.15
SDR39U1-221ENST00000556707 EN2P19622 333 aaPredicted RBP28.46■■■□□ 2.15
SDR39U1-221ENST00000556707 GJA8P48165 433 aa28.46■■■□□ 2.15
SDR39U1-221ENST00000556707 METAP2P50579 478 aaKnown RBP eCLIP28.46■■■□□ 2.15
SDR39U1-221ENST00000556707 RPS6P62753 249 aaKnown RBP28.46■■■□□ 2.15
SDR39U1-221ENST00000556707 SLC30A10Q6XR72 485 aa28.46■■■□□ 2.15
SDR39U1-221ENST00000556707 TRPV1Q8NER1 839 aa28.46■■■□□ 2.15
SDR39U1-221ENST00000556707 U2AF1L4Q8WU68 220 aaKnown RBP28.46■■■□□ 2.15
SDR39U1-221ENST00000556707 DEFB118Q96PH6 123 aa28.46■■■□□ 2.15
SDR39U1-221ENST00000556707 NRBP1Q9UHY1 535 aa28.46■■■□□ 2.15
SDR39U1-221ENST00000556707 NID2Q14112 1375 aa28.46■■■□□ 2.15
SDR39U1-221ENST00000556707 SGPL1O95470 568 aa28.45■■■□□ 2.14
SDR39U1-221ENST00000556707 MCF2L2Q86YR7 1114 aa28.45■■■□□ 2.14
SDR39U1-221ENST00000556707 CCDC82Q8N4S0 544 aa28.45■■■□□ 2.14
SDR39U1-221ENST00000556707 SEC63Q9UGP8 760 aaKnown RBP28.45■■■□□ 2.14
SDR39U1-221ENST00000556707 CCDC196A0A1B0GTZ2 297 aa28.44■■■□□ 2.14
SDR39U1-221ENST00000556707 CALML3P27482 149 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms