RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 PDHBP11177 359 aa12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 RAG1P15918 1043 aa12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 NOVP48745 357 aa12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 IRX5P78411 483 aaPredicted RBP12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 TNFAIP2Q03169 654 aa12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 SNX17Q15036 470 aa12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 IMMTQ16891 758 aaKnown RBP12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 C1orf53Q5VUE5 145 aa12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 Q7L0L9 218 aa12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 FAM133AQ8N9E0 248 aa12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 TRIM43Q96BQ3 446 aaPredicted RBP12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 RANBP17Q9H2T7 1088 aaKnown RBP12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 KAT14Q9H8E8 782 aa12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 TMEM39AQ9NV64 488 aa12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 CYP39A1Q9NYL5 469 aa12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 CTNNA3Q9UI47 895 aa12.42□□□□□ -0.42
SPTLC2-205ENST00000556607 MYH6P13533 1939 aa12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 TRIOBPQ9H2D6 2365 aa12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 B4E1Z4 1266 aa12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 ADCY6O43306 1168 aa12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 DHX16O60231 1041 aaKnown RBP12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 GOLGA8HP0CJ92 632 aa12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 CALML3P27482 149 aa12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 BEX3Q00994 111 aa12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 BAATQ14032 418 aaPredicted RBP12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 CCDC178Q5BJE1 867 aa12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 BTNL9Q6UXG8 535 aa12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 FBXO16Q8IX29 292 aaPredicted RBP12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 KLHDC9Q8NEP7 349 aa12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 PURBQ96QR8 312 aaKnown RBP12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 UBA5Q9GZZ9 404 aa12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 AP5M1Q9H0R1 490 aa12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 DDX49Q9Y6V7 483 aaKnown RBP12.41□□□□□ -0.42
SPTLC2-205ENST00000556607 DYNC1LI2O43237 492 aaPredicted RBP12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 GJA9P57773 515 aa12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 ZNF543Q08ER8 600 aa12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 SHHQ15465 462 aa12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 USH1GQ495M9 461 aa12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 GPR153Q6NV75 609 aa12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 KIAA1211Q6ZU35 1233 aa12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 TLK2Q86UE8 772 aa12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 DGKHQ86XP1 1220 aa12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 DSCC1Q9BVC3 393 aa12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 KRT23Q9C075 422 aa12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 PDGFCQ9NRA1 345 aa12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 ADD3Q9UEY8 706 aaKnown RBP12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 LCTP09848 1927 aa12.4□□□□□ -0.42
SPTLC2-205ENST00000556607 LRRC37A2A6NM11 1700 aa12.4□□□□□ -0.43
SPTLC2-205ENST00000556607 MROH7Q68CQ1 1323 aa12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 A0A0U1RQG5 324 aaPredicted RBP12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 NFIBO00712 420 aa12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 TLR3O15455 904 aaKnown RBP12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 ZEB2O60315 1214 aa12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 CST5P28325 142 aaPredicted RBP12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 ALDH5A1P51649 535 aaPredicted RBP12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 C9orf50Q5SZB4 431 aa12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 GPATCH4Q5T3I0 446 aaKnown RBP12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 TTC22Q5TAA0 569 aa12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 RNF207Q6ZRF8 634 aa12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 PNMA1Q8ND90 353 aa12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 RUFY2Q8WXA3 655 aa12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 FAM161BQ96MY7 647 aa12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 ZSCAN10Q96SZ4 725 aaPredicted RBP12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 MPHOSPH6Q99547 160 aaKnown RBP12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 UBAC1Q9BSL1 405 aa12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 CPVLQ9H3G5 476 aa12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 PNMA2Q9UL42 364 aa12.39□□□□□ -0.43
SPTLC2-205ENST00000556607 ELP1O95163 1332 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 TNKSO95271 1327 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 ARVCFO00192 962 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 SMPD1P17405 629 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 PDE4AP27815 886 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 FPGSQ05932 587 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 FAAP100Q0VG06 881 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 TRDNQ13061 729 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 IQSEC1Q6DN90 963 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 CCSAPQ6IQ19 270 aaPredicted RBP12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 SLC30A10Q6XR72 485 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 SLC17A8Q8NDX2 589 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 TOX2Q96NM4 488 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 KATNBL1Q9H079 304 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 UPF3AQ9H1J1 476 aaKnown RBP12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 CNNM2Q9H8M5 875 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 VAT1LQ9HCJ6 419 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 ZSWIM5Q9P217 1185 aa12.38□□□□□ -0.43
SPTLC2-205ENST00000556607 ASTN1O14525 1302 aa12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 GSPT1P15170 499 aaKnown RBP12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 PTGS1P23219 599 aa12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 ITGB8P26012 769 aa12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 NT5C2P49902 561 aa12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 PDE4DQ08499 809 aa12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 FSCN1Q16658 493 aaKnown RBP12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 IFIT1BQ5T764 474 aaKnown RBP12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 ZNF697Q5TEC3 545 aa12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 CXCL17Q6UXB2 119 aa12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 ANKRD33Q7Z3H0 272 aa12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 RNPC3Q96LT9 517 aaKnown RBP12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 PPP1R12CQ9BZL4 782 aa12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 VTA1Q9NP79 307 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms