RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 COL2A1P02458 1487 aaPredicted RBP20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 USP17L15C9J2P7 530 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 USP17L13C9JLJ4 530 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 USP17L11C9JVI0 530 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 USP17L18D6R9N7 530 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 USP17L22D6RA61 530 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 USP17L17D6RBQ6 530 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 USP17L19D6RCP7 530 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 USP17L20D6RJB6 530 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 TDP2O95551 362 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 TPM2P07951 284 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 OR52Z1P0C646 297 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 ATP1A3P13637 1013 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 TXLNAP40222 546 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 PRELPP51888 382 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 USP17L24Q0WX57 530 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 MORC3Q14149 939 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 TNIP1Q15025 636 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 HSP90AA4PQ58FG1 418 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 KIAA1755Q5JYT7 1200 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 USP17L6PQ6QN14 398 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 CCDC84Q86UT8 332 aaPredicted RBP20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 CCDC34Q96HJ3 373 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 KCNF1Q9H3M0 494 aa20.74■□□□□ 0.91
SDR39U1-220ENST00000556548 EDIL3O43854 480 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 SMC2O95347 1197 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 BMP3P12645 472 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 TECP42680 631 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 USH1GQ495M9 461 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 PDXDC2PQ6P474 469 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 ZBED3Q96IU2 234 aaPredicted RBP20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 MTRQ99707 1265 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 UBA7P41226 1012 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 MYL5Q02045 173 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 SAMD1Q6SPF0 538 aaPredicted RBP20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 SAMD7Q7Z3H4 446 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 C17orf53Q8N3J3 647 aaPredicted RBP20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 GMCL1Q96IK5 515 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 HSD3B7Q9H2F3 369 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 ZBTB21Q9ULJ3 1066 aa20.73■□□□□ 0.91
SDR39U1-220ENST00000556548 SLC37A4O43826 429 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 STAT6P42226 847 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 TXKP42681 527 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 MRPL12P52815 198 aaKnown RBP20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 TPM4P67936 248 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 FMR1Q06787 632 aaKnown RBP eCLIP20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 DPYDQ12882 1025 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 CCDC144BQ3MJ40 725 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 PPP1R18Q6NYC8 613 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 TRMT44Q8IYL2 757 aaKnown RBP20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 SMYD4Q8IYR2 804 aaPredicted RBP20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 SPATA20Q8TB22 786 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 UIMC1Q96RL1 719 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 IFNKQ9P0W0 207 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 CD2APQ9Y5K6 639 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 ASTN2O75129 1339 aaPredicted RBP20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 LAD1O00515 517 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 IKBKBO14920 756 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 PTGER2P43116 358 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 CUL4BQ13620 913 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 RASA3Q14644 834 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 ARHGEF10LQ9HCE6 1279 aa20.72■□□□□ 0.91
SDR39U1-220ENST00000556548 GMPSP49915 693 aaPredicted RBP20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 TBC1D10BQ4KMP7 808 aaPredicted RBP20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 SYDE2Q5VT97 1194 aa20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 FAM83AQ86UY5 434 aa20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 MRFAP1L1Q96HT8 127 aa20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 XPO4Q9C0E2 1151 aaKnown RBP20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 DISC1Q9NRI5 854 aa20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 FANCLQ9NW38 375 aa20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 FER1L6Q2WGJ9 1857 aa20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 PRPHP41219 470 aa20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 CLK2P49760 499 aaKnown RBP20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 FKBP1CQ5VVH2 108 aa20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 RRAGBQ5VZM2 374 aa20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 GLIS2Q9BZE0 524 aaPredicted RBP20.71■□□□□ 0.91
SDR39U1-220ENST00000556548 LRMPQ12912 555 aa20.7■□□□□ 0.9
SDR39U1-220ENST00000556548 CALCRLQ16602 461 aa20.7■□□□□ 0.9
SDR39U1-220ENST00000556548 KLHL10Q6JEL2 608 aa20.7■□□□□ 0.9
SDR39U1-220ENST00000556548 FILIP1Q7Z7B0 1213 aa20.7■□□□□ 0.9
SDR39U1-220ENST00000556548 MICALL2Q8IY33 904 aa20.7■□□□□ 0.9
SDR39U1-220ENST00000556548 MLKLQ8NB16 471 aa20.7■□□□□ 0.9
SDR39U1-220ENST00000556548 GJA10Q969M2 543 aa20.7■□□□□ 0.9
SDR39U1-220ENST00000556548 NAALADL2Q58DX5 795 aa20.7■□□□□ 0.9
SDR39U1-220ENST00000556548 FAM83BQ5T0W9 1011 aa20.7■□□□□ 0.9
SDR39U1-220ENST00000556548 PGAP2Q9UHJ9 254 aa20.7■□□□□ 0.9
SDR39U1-220ENST00000556548 BRCA1P38398 1863 aaKnown RBP20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 CDC25BP30305 580 aa20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 ARID5BQ14865 1188 aa20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 CABP7Q86V35 215 aa20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 TRIML1Q8N9V2 468 aa20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 LRRC15Q8TF66 581 aa20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 PYCARDQ9ULZ3 195 aa20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 ZNF500O60304 480 aaPredicted RBP20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 CD44P16070 742 aaKnown RBP20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 CAP2P40123 477 aa20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 FANCCQ00597 558 aa20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 FBXO11Q86XK2 927 aa20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 CNOT7Q9UIV1 285 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms