RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 SLC25A27O95847 323 aa13.25□□□□□ -0.29
GABRB3-210ENST00000556166 HSPA8P11142 646 aaKnown RBP13.25□□□□□ -0.29
GABRB3-210ENST00000556166 SCG2P13521 617 aa13.25□□□□□ -0.29
GABRB3-210ENST00000556166 CPLX2Q6PUV4 134 aaKnown RBP13.25□□□□□ -0.29
GABRB3-210ENST00000556166 HEATR3Q7Z4Q2 680 aa13.25□□□□□ -0.29
GABRB3-210ENST00000556166 SHCBP1Q8NEM2 672 aa13.25□□□□□ -0.29
GABRB3-210ENST00000556166 GJB4Q9NTQ9 266 aa13.25□□□□□ -0.29
GABRB3-210ENST00000556166 RNF146Q9NTX7 359 aa13.25□□□□□ -0.29
GABRB3-210ENST00000556166 SEC63Q9UGP8 760 aaKnown RBP13.25□□□□□ -0.29
GABRB3-210ENST00000556166 PSMC4P43686 418 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 CCNA1P78396 465 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 TKFCQ3LXA3 575 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 HSCBQ8IWL3 235 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 TRIM22Q8IYM9 498 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 CD99L2Q8TCZ2 262 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 MROH8Q9H579 483 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 BARHL2Q9NY43 387 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 STK36Q9NRP7 1315 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 SMCHD1A6NHR9 2005 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 FKTNO75072 461 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 DEXIO95424 95 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 MAPK4P31152 587 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 ANP32AP39687 249 aaKnown RBP13.24□□□□□ -0.29
GABRB3-210ENST00000556166 AKAP17AQ02040 695 aaKnown RBP13.24□□□□□ -0.29
GABRB3-210ENST00000556166 GPR142Q7Z601 462 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 PLEKHH3Q7Z736 793 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 CHST13Q8NET6 341 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 PURBQ96QR8 312 aaKnown RBP13.24□□□□□ -0.29
GABRB3-210ENST00000556166 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 VPS54Q9P1Q0 977 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 GJD2Q9UKL4 321 aa13.24□□□□□ -0.29
GABRB3-210ENST00000556166 ABCB11O95342 1321 aa13.23□□□□□ -0.29
GABRB3-210ENST00000556166 PTPREP23469 700 aa13.23□□□□□ -0.29
GABRB3-210ENST00000556166 MORN1Q5T089 497 aa13.23□□□□□ -0.29
GABRB3-210ENST00000556166 WDR78Q5VTH9 848 aa13.23□□□□□ -0.29
GABRB3-210ENST00000556166 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.23□□□□□ -0.29
GABRB3-210ENST00000556166 USP6NLQ92738 828 aa13.23□□□□□ -0.29
GABRB3-210ENST00000556166 ACAD9Q9H845 621 aa13.23□□□□□ -0.29
GABRB3-210ENST00000556166 A1CFQ9NQ94 594 aaKnown RBP13.23□□□□□ -0.29
GABRB3-210ENST00000556166 RBM27Q9P2N5 1060 aaKnown RBP13.23□□□□□ -0.29
GABRB3-210ENST00000556166 PNMA2Q9UL42 364 aa13.23□□□□□ -0.29
GABRB3-210ENST00000556166 MRPL11Q9Y3B7 192 aaKnown RBP13.23□□□□□ -0.29
GABRB3-210ENST00000556166 COL11A1P12107 1806 aaPredicted RBP13.22□□□□□ -0.29
GABRB3-210ENST00000556166 COBLO75128 1261 aa13.22□□□□□ -0.29
GABRB3-210ENST00000556166 COPB2P35606 906 aa13.22□□□□□ -0.29
GABRB3-210ENST00000556166 LBX1P52954 281 aa13.22□□□□□ -0.29
GABRB3-210ENST00000556166 BAATQ14032 418 aaPredicted RBP13.22□□□□□ -0.29
GABRB3-210ENST00000556166 NPY5RQ15761 445 aa13.22□□□□□ -0.29
GABRB3-210ENST00000556166 RGS22Q8NE09 1264 aa13.22□□□□□ -0.29
GABRB3-210ENST00000556166 ALG1Q9BT22 464 aa13.22□□□□□ -0.29
GABRB3-210ENST00000556166 CYP39A1Q9NYL5 469 aa13.22□□□□□ -0.29
GABRB3-210ENST00000556166 GABRQQ9UN88 632 aa13.22□□□□□ -0.29
GABRB3-210ENST00000556166 DNAJC25-GNG10A0A024R161 153 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 SLC15A5A6NIM6 579 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 MEIS2O14770 477 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 PGK2P07205 417 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 GJB2P29033 226 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 HOXA13P31271 388 aaPredicted RBP13.21□□□□□ -0.29
GABRB3-210ENST00000556166 CTCFP49711 727 aaPredicted RBP13.21□□□□□ -0.29
GABRB3-210ENST00000556166 FOSBP53539 338 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 NAPAP54920 295 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 FCGRTP55899 365 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 CNTN2Q02246 1040 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 GHRHRQ02643 423 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 GRB14Q14449 540 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 NSMFQ6X4W1 530 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 SLC30A10Q6XR72 485 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 CCAR1Q8IX12 1150 aaKnown RBP13.21□□□□□ -0.29
GABRB3-210ENST00000556166 INTS4Q96HW7 963 aaKnown RBP13.21□□□□□ -0.29
GABRB3-210ENST00000556166 MMP19Q99542 508 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 PSTPIP2Q9H939 334 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 SH3GLB2Q9NR46 395 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 COL20A1Q9P218 1284 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 FBXO40Q9UH90 709 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 KCNJ14Q9UNX9 436 aa13.21□□□□□ -0.29
GABRB3-210ENST00000556166 SMCO2A6NFE2 343 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 TNPO2O14787 897 aaKnown RBP13.2□□□□□ -0.3
GABRB3-210ENST00000556166 STRNO43815 780 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 FCER1AP12319 257 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 ADORA2AP29274 412 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 HSD17B4P51659 736 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 RPS6P62753 249 aaKnown RBP13.2□□□□□ -0.3
GABRB3-210ENST00000556166 HMGN5P82970 282 aaKnown RBP13.2□□□□□ -0.3
GABRB3-210ENST00000556166 TRAF1Q13077 416 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 USP17L6PQ6QN14 398 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 ABRAQ8N0Z2 381 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 ANKRD35Q8N283 1001 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 SYTL5Q8TDW5 730 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-210ENST00000556166 ERO1AQ96HE7 468 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 FGD4Q96M96 766 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 ZMYND12Q9H0C1 365 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 SMC3Q9UQE7 1217 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-210ENST00000556166 ASTN1O14525 1302 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 hCG_1984214I3L0E3 225 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 CFBP00751 764 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 PRKCZQ05513 592 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 UBE2SQ16763 222 aa13.2□□□□□ -0.3
GABRB3-210ENST00000556166 RNF207Q6ZRF8 634 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms