RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
VRK1-204ENST00000555351 CCDC144BQ3MJ40 725 aa13.86□□□□□ -0.19
VRK1-204ENST00000555351 MUM1L1Q5H9M0 696 aa13.86□□□□□ -0.19
VRK1-204ENST00000555351 CENPQQ7L2Z9 268 aaPredicted RBP13.86□□□□□ -0.19
VRK1-204ENST00000555351 PCSK9Q8NBP7 692 aaKnown RBP13.86□□□□□ -0.19
VRK1-204ENST00000555351 NUP133Q8WUM0 1156 aa13.86□□□□□ -0.19
VRK1-204ENST00000555351 ZKSCAN3Q9BRR0 538 aa13.86□□□□□ -0.19
VRK1-204ENST00000555351 ZHX1Q9UKY1 873 aaPredicted RBP13.86□□□□□ -0.19
VRK1-204ENST00000555351 ZMYND8Q9ULU4 1186 aaPredicted RBP13.86□□□□□ -0.19
VRK1-204ENST00000555351 SYNRGQ9UMZ2 1314 aa13.86□□□□□ -0.19
VRK1-204ENST00000555351 LRRC37A2A6NM11 1700 aa13.85□□□□□ -0.19
VRK1-204ENST00000555351 PGK1P00558 417 aa13.85□□□□□ -0.19
VRK1-204ENST00000555351 MAGEA10P43363 369 aaPredicted RBP13.85□□□□□ -0.19
VRK1-204ENST00000555351 GJA9P57773 515 aa13.85□□□□□ -0.19
VRK1-204ENST00000555351 SEC23AQ15436 765 aa13.85□□□□□ -0.19
VRK1-204ENST00000555351 CCSAPQ6IQ19 270 aaPredicted RBP13.85□□□□□ -0.19
VRK1-204ENST00000555351 MAP4K1Q92918 833 aa13.85□□□□□ -0.19
VRK1-204ENST00000555351 CHMP4CQ96CF2 233 aa13.85□□□□□ -0.19
VRK1-204ENST00000555351 VTA1Q9NP79 307 aa13.85□□□□□ -0.19
VRK1-204ENST00000555351 PRKAG2Q9UGJ0 569 aa13.85□□□□□ -0.19
VRK1-204ENST00000555351 Q9Y3F1 56 aa13.85□□□□□ -0.19
VRK1-204ENST00000555351 ELP1O95163 1332 aa13.85□□□□□ -0.19
VRK1-204ENST00000555351 A0A1W2PQ45 241 aaPredicted RBP13.84□□□□□ -0.19
VRK1-204ENST00000555351 A0A1W2PQY0 241 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 CYP21A2P08686 494 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 PARP1P09874 1014 aaKnown RBP13.84□□□□□ -0.19
VRK1-204ENST00000555351 SYN1P17600 705 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 ACLYP53396 1101 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 ATN1P54259 1190 aaPredicted RBP13.84□□□□□ -0.19
VRK1-204ENST00000555351 SNAP25P60880 206 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 PTH1RQ03431 593 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 IFIT1BQ5T764 474 aaKnown RBP13.84□□□□□ -0.19
VRK1-204ENST00000555351 IQSEC1Q6DN90 963 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 GPR153Q6NV75 609 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 NSMFQ6X4W1 530 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 DNERQ8NFT8 737 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 CLEC4DQ8WXI8 215 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 TOX2Q96NM4 488 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 MPHOSPH6Q99547 160 aaKnown RBP13.84□□□□□ -0.19
VRK1-204ENST00000555351 MTA3Q9BTC8 594 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 SEZ6LQ9BYH1 1024 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 ASTN1O14525 1302 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 LCTP09848 1927 aa13.84□□□□□ -0.19
VRK1-204ENST00000555351 MCM3APO60318 1980 aa13.83□□□□□ -0.19
VRK1-204ENST00000555351 B4DLN1 442 aa13.83□□□□□ -0.2
VRK1-204ENST00000555351 NFIBO00712 420 aa13.83□□□□□ -0.2
VRK1-204ENST00000555351 MRPL12P52815 198 aaKnown RBP13.83□□□□□ -0.2
VRK1-204ENST00000555351 TNFAIP2Q03169 654 aa13.83□□□□□ -0.2
VRK1-204ENST00000555351 BAATQ14032 418 aaPredicted RBP13.83□□□□□ -0.2
VRK1-204ENST00000555351 SART3Q15020 963 aaKnown RBP13.83□□□□□ -0.2
VRK1-204ENST00000555351 BMP2KLQ5H9B9 411 aa13.83□□□□□ -0.2
VRK1-204ENST00000555351 RNF207Q6ZRF8 634 aa13.83□□□□□ -0.2
VRK1-204ENST00000555351 ANKRD33Q7Z3H0 272 aa13.83□□□□□ -0.2
VRK1-204ENST00000555351 TDHQ8IZJ6 230 aa13.83□□□□□ -0.2
VRK1-204ENST00000555351 NCOA7Q8NI08 942 aa13.83□□□□□ -0.2
VRK1-204ENST00000555351 LBHD1Q9BQE6 289 aaPredicted RBP13.83□□□□□ -0.2
VRK1-204ENST00000555351 ATP11BQ9Y2G3 1177 aa13.83□□□□□ -0.2
VRK1-204ENST00000555351 ABCB11O95342 1321 aa13.83□□□□□ -0.2
VRK1-204ENST00000555351 LTBP2Q14767 1821 aa13.83□□□□□ -0.2
VRK1-204ENST00000555351 TRIOBPQ9H2D6 2365 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 ERICH2A1L162 156 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 CABYRO75952 493 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
VRK1-204ENST00000555351 GOLGA8HP0CJ92 632 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 ALDH5A1P51649 535 aaPredicted RBP13.82□□□□□ -0.2
VRK1-204ENST00000555351 TRAF1Q13077 416 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 KCNA10Q16322 511 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 LRIT3Q3SXY7 679 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 TRIM60Q495X7 471 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 KIAA1211Q6ZU35 1233 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 CYB5R4Q7L1T6 521 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 RALYLQ86SE5 291 aaKnown RBP13.82□□□□□ -0.2
VRK1-204ENST00000555351 ADGRF4Q8IZF3 695 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 SAMD3Q8N6K7 520 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 GLT1D1Q96MS3 346 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 UBE2OQ9C0C9 1292 aaKnown RBP13.82□□□□□ -0.2
VRK1-204ENST00000555351 STARD7Q9NQZ5 370 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 GNEQ9Y223 722 aaKnown RBP13.82□□□□□ -0.2
VRK1-204ENST00000555351 MROH7Q68CQ1 1323 aa13.82□□□□□ -0.2
VRK1-204ENST00000555351 RANBP2P49792 3224 aaKnown RBP13.81□□□□□ -0.2
VRK1-204ENST00000555351 RBM47A0AV96 593 aaKnown RBP13.81□□□□□ -0.2
VRK1-204ENST00000555351 PTPDC1A2A3K4 754 aa13.81□□□□□ -0.2
VRK1-204ENST00000555351 PALM3A6NDB9 673 aaPredicted RBP13.81□□□□□ -0.2
VRK1-204ENST00000555351 E7EWF7 191 aa13.81□□□□□ -0.2
VRK1-204ENST00000555351 ADCY6O43306 1168 aa13.81□□□□□ -0.2
VRK1-204ENST00000555351 C6orf222P0C671 652 aaPredicted RBP13.81□□□□□ -0.2
VRK1-204ENST00000555351 EDNRBP24530 442 aa13.81□□□□□ -0.2
VRK1-204ENST00000555351 RPS6P62753 249 aaKnown RBP13.81□□□□□ -0.2
VRK1-204ENST00000555351 TLE2Q04725 743 aa13.81□□□□□ -0.2
VRK1-204ENST00000555351 CDC37Q16543 378 aaPredicted RBP13.81□□□□□ -0.2
VRK1-204ENST00000555351 TAPT1Q6NXT6 567 aa13.81□□□□□ -0.2
VRK1-204ENST00000555351 MCF2L2Q86YR7 1114 aa13.81□□□□□ -0.2
VRK1-204ENST00000555351 FERMT2Q96AC1 680 aa13.81□□□□□ -0.2
VRK1-204ENST00000555351 LENG1Q96BZ8 264 aaPredicted RBP13.81□□□□□ -0.2
VRK1-204ENST00000555351 MTMR8Q96EF0 704 aa13.81□□□□□ -0.2
VRK1-204ENST00000555351 MAP3K14Q99558 947 aa13.81□□□□□ -0.2
VRK1-204ENST00000555351 UBA5Q9GZZ9 404 aa13.81□□□□□ -0.2
VRK1-204ENST00000555351 JMJD4Q9H9V9 463 aa13.81□□□□□ -0.2
VRK1-204ENST00000555351 MAP3K20Q9NYL2 800 aaKnown RBP13.81□□□□□ -0.2
VRK1-204ENST00000555351 IFIT3O14879 490 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms