RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 IFT57Q9NWB7 429 aa7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 PCDHA11Q9Y5I1 949 aa7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 THBDP07204 575 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 C6orf222P0C671 652 aaPredicted RBP7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 MASP1P48740 699 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 PTPROQ16827 1216 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 AOC3Q16853 763 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 C21orf62-AS1Q17RA5 79 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 PRSS53Q2L4Q9 553 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 E4F1Q66K89 784 aaPredicted RBP7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 IQCEQ6IPM2 695 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 INTS5Q6P9B9 1019 aaKnown RBP7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 USP53Q70EK8 1073 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 PPIL6Q8IXY8 311 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 ANKRD13AQ8IZ07 590 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 STK11IPQ8N1F8 1099 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 KREMEN2Q8NCW0 462 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 NPLOC4Q8TAT6 608 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 BRINP2Q9C0B6 783 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 BSDC1Q9NW68 430 aaPredicted RBP7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 NDOR1Q9UHB4 597 aa7.72□□□□□ -1.17
CKS1BP1-201ENST00000555221 MEFVO15553 781 aaPredicted RBP7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 TGFB1P01137 390 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 RBM10P98175 930 aaKnown RBP7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 EGR3Q06889 387 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 CYP4F3Q08477 520 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 KCNAB2Q13303 367 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 TESK1Q15569 626 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 NTRK3Q16288 839 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 MSMPQ1L6U9 139 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 TM4SF20Q53R12 229 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 PRSS36Q5K4E3 855 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 RTP2Q5QGT7 225 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 RSPO2Q6UXX9 243 aaPredicted RBP7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 CYP2R1Q6VVX0 501 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 DHX37Q8IY37 1157 aaKnown RBP7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 GSTCDQ8NEC7 633 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 FRS2Q8WU20 508 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 SYTL4Q96C24 671 aaPredicted RBP7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 ZFYVE21Q9BQ24 234 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 CDADC1Q9BWV3 514 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 GPRC5CQ9NQ84 441 aa7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 INTS7Q9NVH2 962 aaKnown RBP7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 MAGEC2Q9UBF1 373 aaPredicted RBP7.71□□□□□ -1.18
CKS1BP1-201ENST00000555221 BLACEA4D250 179 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 AQP7O14520 342 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 IRS4O14654 1257 aaPredicted RBP7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 FGF10O15520 208 aaPredicted RBP7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 FKTNO75072 461 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 ESR1P03372 595 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 PLS3P13797 630 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 NAT1P18440 290 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 PAMP19021 973 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 HOXA10P31260 410 aaPredicted RBP7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 DENND5AQ6IQ26 1287 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 STYK1Q6J9G0 422 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 NAT16Q8N8M0 369 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 CLUHP3Q96NS8 147 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 SEMA6BQ9H3T3 888 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 SLC52A2Q9HAB3 445 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 AP5S1Q9NUS5 200 aa7.7□□□□□ -1.18
CKS1BP1-201ENST00000555221 PPM1GO15355 546 aaPredicted RBP7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 TBC1D8O95759 1140 aa7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 FURINP09958 794 aa7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 LTBRP36941 435 aa7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 TEKQ02763 1124 aa7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 IKZF1Q13422 519 aa7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 BRAPQ7Z569 592 aa7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 PTCHD1Q96NR3 888 aa7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 TRIM39Q9HCM9 518 aa7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 GPR27Q9NS67 375 aa7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 LMCD1Q9NZU5 365 aa7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 CLEC1BQ9P126 229 aa7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 NPFFR2Q9Y5X5 522 aa7.69□□□□□ -1.18
CKS1BP1-201ENST00000555221 NPHP3-ACAD11A0A0J9YXS1 232 aa7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 TMEM82A0PJX8 343 aa7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 COBLO75128 1261 aa7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 VIL1P09327 827 aaKnown RBP7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 MYCLP1P12525 358 aaPredicted RBP7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 RPL10P27635 214 aaKnown RBP7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 WAPLQ7Z5K2 1190 aa7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 SLC7A14Q8TBB6 771 aa7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 DIO2Q92813 273 aa7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 FCRL2Q96LA5 508 aaPredicted RBP7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 MAGEB10Q96LZ2 347 aaPredicted RBP7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 MMP19Q99542 508 aa7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 PHF20Q9BVI0 1012 aa7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 COL4A3BPQ9Y5P4 624 aa7.68□□□□□ -1.18
CKS1BP1-201ENST00000555221 hCG_2014768A0A024R1R8 64 aa7.67□□□□□ -1.18
CKS1BP1-201ENST00000555221 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.67□□□□□ -1.18
CKS1BP1-201ENST00000555221 ANGEL2Q5VTE6 544 aaKnown RBP7.67□□□□□ -1.18
CKS1BP1-201ENST00000555221 KRT26Q7Z3Y9 468 aa7.67□□□□□ -1.18
CKS1BP1-201ENST00000555221 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.67□□□□□ -1.18
CKS1BP1-201ENST00000555221 SLC5A6Q9Y289 635 aa7.67□□□□□ -1.18
CKS1BP1-201ENST00000555221 NOP58Q9Y2X3 529 aaKnown RBP7.67□□□□□ -1.18
CKS1BP1-201ENST00000555221 ZNF281Q9Y2X9 895 aa7.67□□□□□ -1.18
CKS1BP1-201ENST00000555221 PRNPP04156 253 aa7.66□□□□□ -1.18
CKS1BP1-201ENST00000555221 ASLP04424 464 aa7.66□□□□□ -1.18
CKS1BP1-201ENST00000555221 GPR85P60893 370 aa7.66□□□□□ -1.18
CKS1BP1-201ENST00000555221 LRRTM3Q86VH5 581 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms