RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 CFAP100Q494V2 611 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 DALRD3Q5D0E6 543 aaKnown RBP6.89□□□□□ -1.31
ATXN3-230ENST00000554673 ZSCAN25Q6NSZ9 544 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 KANK3Q6NY19 840 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 APOA5Q6Q788 366 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 HHIPL2Q6UWX4 724 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 CLEC17AQ6ZS10 378 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 SV2AQ7L0J3 742 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 CDC37L1Q7L3B6 337 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 SGMS1Q86VZ5 419 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 METTL16Q86W50 562 aaKnown RBP6.89□□□□□ -1.31
ATXN3-230ENST00000554673 DZIP1Q86YF9 867 aaKnown RBP6.89□□□□□ -1.31
ATXN3-230ENST00000554673 HSCBQ8IWL3 235 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 CMTR1Q8N1G2 835 aaKnown RBP6.89□□□□□ -1.31
ATXN3-230ENST00000554673 TRPM4Q8TD43 1214 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 NANOS1Q8WY41 292 aaKnown RBP6.89□□□□□ -1.31
ATXN3-230ENST00000554673 TEPSINQ96N21 525 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 ASB16Q96NS5 453 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 NAPBQ9H115 298 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 CPVLQ9H3G5 476 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 TDRD3Q9H7E2 651 aaKnown RBP6.89□□□□□ -1.31
ATXN3-230ENST00000554673 BCS1LQ9Y276 419 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 WDR19Q8NEZ3 1342 aa6.89□□□□□ -1.31
ATXN3-230ENST00000554673 COL2A1P02458 1487 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-230ENST00000554673 PLIN4Q96Q06 1357 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 EDIL3O43854 480 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 ICMTO60725 284 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 PLEKHA8P1O95397 391 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 TAL1P17542 331 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-230ENST00000554673 SYT1P21579 422 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 GJB2P29033 226 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 CDK8P49336 464 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 ZNF280AP59817 542 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-230ENST00000554673 FOXK2Q01167 660 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 TROAPQ12815 778 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 PKN1Q16512 942 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 OCLNQ16625 522 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 NAALADL2Q58DX5 795 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 XP32Q5T750 250 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 CC2D2BQ6DHV5 1058 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 GIMAP6Q6P9H5 292 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 C16orf86Q6ZW13 317 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 CCDC84Q86UT8 332 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-230ENST00000554673 TEX11Q8IYF3 940 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 PLPP7Q8NBV4 271 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 SCARF2Q96GP6 870 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-230ENST00000554673 INTS4Q96HW7 963 aaKnown RBP6.88□□□□□ -1.31
ATXN3-230ENST00000554673 FTOQ9C0B1 505 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATXN3-230ENST00000554673 OSBPL5Q9H0X9 879 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-230ENST00000554673 PPP1R1BQ9UD71 204 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-230ENST00000554673 ZNRF3Q9ULT6 936 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 FZD1Q9UP38 647 aa6.88□□□□□ -1.31
ATXN3-230ENST00000554673 TNKSO95271 1327 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 KLF18A0A0U1RQI7 1052 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 hCG_1642624A0A1W2PR95 340 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 CLRN2A0PK11 232 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 SLC35F4A4IF30 521 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 ZNF213O14771 459 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 CYTH3O43739 400 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 APPP05067 770 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 MCCP23508 829 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 TDO2P48775 406 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 GMPSP49915 693 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-230ENST00000554673 CLDN10P78369 228 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 MAP3K10Q02779 954 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 RESTQ13127 1097 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 PICALMQ13492 652 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 SF3A1Q15459 793 aaKnown RBP6.87□□□□□ -1.31
ATXN3-230ENST00000554673 IMMTQ16891 758 aaKnown RBP6.87□□□□□ -1.31
ATXN3-230ENST00000554673 EARS2Q5JPH6 523 aaKnown RBP6.87□□□□□ -1.31
ATXN3-230ENST00000554673 CCDC144CPQ8IYA2 1237 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 RTKN2Q8IZC4 609 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 STAG2Q8N3U4 1231 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 LARGE2Q8N3Y3 721 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 OGFOD1Q8N543 542 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 NCOA7Q8NI08 942 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 TBC1D22AQ8WUA7 517 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 ANKS1AQ92625 1134 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 DDX11Q96FC9 970 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 EYA3Q99504 573 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 MRIQ9BWK5 157 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 IDI2Q9BXS1 227 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 CRNKL1Q9BZJ0 848 aaKnown RBP6.87□□□□□ -1.31
ATXN3-230ENST00000554673 TAOK3Q9H2K8 898 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 SPON1Q9HCB6 807 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 ATP8A2Q9NTI2 1148 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 USP40Q9NVE5 1235 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 MCM9Q9NXL9 1143 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 CHMP5Q9NZZ3 219 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 CXXC1Q9P0U4 656 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-230ENST00000554673 ZNF70Q9UC06 446 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-230ENST00000554673 SUGT1Q9Y2Z0 365 aa6.87□□□□□ -1.31
ATXN3-230ENST00000554673 WDR81Q562E7 1941 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 CNTNAP5Q8WYK1 1306 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 SCN4AP35499 1836 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 PTPDC1A2A3K4 754 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 WNT10BO00744 389 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 GADD45BO75293 160 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-230ENST00000554673 BAG4O95429 457 aaKnown RBP6.86□□□□□ -1.31
ATXN3-230ENST00000554673 GNAT2P19087 354 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms