RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 AGRPO00253 132 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 RFXAPO00287 272 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 SHOXO15266 292 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 EPHX1P07099 455 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 PRKCAP17252 672 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 CORO7P57737 925 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 ERVFRD-1P60508 538 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 HSF5Q4G112 596 aaPredicted RBP3.83□□□□□ -1.8
IFT43-208ENST00000554423 CIAPIN1Q6FI81 312 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 RCSD1Q6JBY9 416 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 ATG14Q6ZNE5 492 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 SLCO6A1Q86UG4 719 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 CABP7Q86V35 215 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 ARHGEF39Q8N4T4 335 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 SLC43A3Q8NBI5 491 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 BVESQ8NE79 360 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 NUP43Q8NFH3 380 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 NLGN2Q8NFZ4 835 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 PTCHD1Q96NR3 888 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 FCRL3Q96P31 734 aaPredicted RBP3.83□□□□□ -1.8
IFT43-208ENST00000554423 KLHL25Q9H0H3 589 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 ERVK13-1Q9NX77 482 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 ACTR10Q9NZ32 417 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 PRKAG3Q9UGI9 489 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 EBF1Q9UH73 591 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 ACSL6Q9UKU0 697 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 PCDHB10Q9UN67 800 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 MINPP1Q9UNW1 487 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 AKT3Q9Y243 479 aa3.83□□□□□ -1.8
IFT43-208ENST00000554423 GPR55Q9Y2T6 319 aaPredicted RBP3.83□□□□□ -1.8
IFT43-208ENST00000554423 C2orf71A6NGG8 1288 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 FGF10O15520 208 aaPredicted RBP3.82□□□□□ -1.8
IFT43-208ENST00000554423 CBFA2T2O43439 604 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 MED14OSP0DP75 135 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 L1CAMP32004 1257 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 YBX1P67809 324 aaKnown RBP3.82□□□□□ -1.8
IFT43-208ENST00000554423 DLG4P78352 724 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 SRSF3P84103 164 aaKnown RBP3.82□□□□□ -1.8
IFT43-208ENST00000554423 RAB3GAP1Q15042 981 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 TIGD5Q53EQ6 642 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 ZNF385BQ569K4 471 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 RTP2Q5QGT7 225 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 IQCEQ6IPM2 695 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 ZPBP2Q6X784 338 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 TMEM151BQ8IW70 566 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 ADCY4Q8NFM4 1077 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 PPP1R14AQ96A00 147 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 SHISA4Q96DD7 197 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 FGD4Q96M96 766 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 CCDC140Q96MF4 163 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 PDLIM7Q9NR12 457 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 LRP2BPQ9P2M1 347 aa3.82□□□□□ -1.8
IFT43-208ENST00000554423 NOTOA8MTQ0 251 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 ETV2O00321 342 aaPredicted RBP3.81□□□□□ -1.8
IFT43-208ENST00000554423 AURKAO14965 403 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 SMAD7O15105 426 aaKnown RBP3.81□□□□□ -1.8
IFT43-208ENST00000554423 DDAH1O94760 285 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 C1QTNF9P0C862 333 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 PAMP19021 973 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 TARBP2Q15633 366 aaKnown RBP3.81□□□□□ -1.8
IFT43-208ENST00000554423 KCNA10Q16322 511 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 LARP1BQ659C4 914 aaKnown RBP3.81□□□□□ -1.8
IFT43-208ENST00000554423 BICRALQ6AI39 1079 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 PAQR3Q6TCH7 311 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 CILP2Q8IUL8 1156 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 FAM178BQ8IXR5 827 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 EPN3Q9H201 632 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 IMPACTQ9P2X3 320 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 PPP1R1BQ9UD71 204 aaPredicted RBP3.81□□□□□ -1.8
IFT43-208ENST00000554423 CGGBP1Q9UFW8 167 aaPredicted RBP3.81□□□□□ -1.8
IFT43-208ENST00000554423 DBR1Q9UK59 544 aaKnown RBP3.81□□□□□ -1.8
IFT43-208ENST00000554423 SMG5Q9UPR3 1016 aaKnown RBP3.81□□□□□ -1.8
IFT43-208ENST00000554423 BACE2Q9Y5Z0 518 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 MRVI1Q9Y6F6 885 aa3.81□□□□□ -1.8
IFT43-208ENST00000554423 NPHP3-ACAD11A0A0J9YXS1 232 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 NPIPB6E9PJ23 425 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 RBAK-RBAKDNI3L0D1 243 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 NPHS1O60500 1241 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 CYBBP04839 570 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 INHBBP09529 407 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 DNAJA1P31689 397 aaKnown RBP3.8□□□□□ -1.8
IFT43-208ENST00000554423 CBX2Q14781 532 aaPredicted RBP3.8□□□□□ -1.8
IFT43-208ENST00000554423 DPY19L1Q2PZI1 675 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 SV2CQ496J9 727 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 EEPD1Q7L9B9 569 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 C1QL4Q86Z23 238 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 NLGN1Q8N2Q7 840 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 TMEM52Q8NDY8 209 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 USP33Q8TEY7 942 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 KLHL6Q8WZ60 621 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 JMJD8Q96S16 334 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 PLCD4Q9BRC7 762 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 MCOLN1Q9GZU1 580 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 CYP26B1Q9NR63 512 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 NUDT5Q9UKK9 219 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 CNOT6Q9ULM6 557 aaKnown RBP3.8□□□□□ -1.8
IFT43-208ENST00000554423 EMC9Q9Y3B6 208 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 IRAK3Q9Y616 596 aa3.8□□□□□ -1.8
IFT43-208ENST00000554423 IQCA1LA6NCM1 817 aa3.79□□□□□ -1.8
IFT43-208ENST00000554423 NUDT19A8MXV4 375 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms