RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 ATP2A1O14983 1001 aa19.98■□□□□ 0.79
TUBB3-205ENST00000554336 CTDNEP1O95476 244 aa19.98■□□□□ 0.79
TUBB3-205ENST00000554336 FXR1P51114 621 aaKnown RBP eCLIP19.98■□□□□ 0.79
TUBB3-205ENST00000554336 IRF5Q13568 498 aa19.98■□□□□ 0.79
TUBB3-205ENST00000554336 CCDC174Q6PII3 467 aa19.98■□□□□ 0.79
TUBB3-205ENST00000554336 HOMER1Q86YM7 354 aa19.98■□□□□ 0.79
TUBB3-205ENST00000554336 PXYLP1Q8TE99 480 aa19.98■□□□□ 0.79
TUBB3-205ENST00000554336 DPF3Q92784 378 aa19.98■□□□□ 0.79
TUBB3-205ENST00000554336 MOV10L1Q9BXT6 1211 aaKnown RBP19.98■□□□□ 0.79
TUBB3-205ENST00000554336 SPATC1LQ9H0A9 340 aa19.98■□□□□ 0.79
TUBB3-205ENST00000554336 SLKQ9H2G2 1235 aaPredicted RBP19.98■□□□□ 0.79
TUBB3-205ENST00000554336 RIPK3Q9Y572 518 aa19.98■□□□□ 0.79
TUBB3-205ENST00000554336 DHX16O60231 1041 aaKnown RBP19.97■□□□□ 0.79
TUBB3-205ENST00000554336 SMARCA1P28370 1054 aa19.97■□□□□ 0.79
TUBB3-205ENST00000554336 GNAQP50148 359 aa19.97■□□□□ 0.79
TUBB3-205ENST00000554336 PPP2R5BQ15173 497 aa19.97■□□□□ 0.79
TUBB3-205ENST00000554336 CPXCR1Q8N123 301 aa19.97■□□□□ 0.79
TUBB3-205ENST00000554336 PIBF1Q8WXW3 757 aa19.97■□□□□ 0.79
TUBB3-205ENST00000554336 COA7Q96BR5 231 aa19.97■□□□□ 0.79
TUBB3-205ENST00000554336 AGBL1Q96MI9 1066 aa19.97■□□□□ 0.79
TUBB3-205ENST00000554336 LZTS2Q9BRK4 669 aa19.97■□□□□ 0.79
TUBB3-205ENST00000554336 ZBED4O75132 1171 aa19.96■□□□□ 0.79
TUBB3-205ENST00000554336 SGPL1O95470 568 aa19.96■□□□□ 0.79
TUBB3-205ENST00000554336 ICAM1P05362 532 aa19.96■□□□□ 0.79
TUBB3-205ENST00000554336 IFNAR1P17181 557 aa19.96■□□□□ 0.79
TUBB3-205ENST00000554336 GPRC5AQ8NFJ5 357 aa19.96■□□□□ 0.79
TUBB3-205ENST00000554336 PHKBQ93100 1093 aa19.96■□□□□ 0.79
TUBB3-205ENST00000554336 TMX3Q96JJ7 454 aa19.96■□□□□ 0.79
TUBB3-205ENST00000554336 ZNF236Q9UL36 1845 aa19.96■□□□□ 0.79
TUBB3-205ENST00000554336 CCDC196A0A1B0GTZ2 297 aa19.95■□□□□ 0.78
TUBB3-205ENST00000554336 ZBTB5O15062 677 aa19.95■□□□□ 0.78
TUBB3-205ENST00000554336 FARP2O94887 1054 aaPredicted RBP19.95■□□□□ 0.78
TUBB3-205ENST00000554336 FDX1P10109 184 aa19.95■□□□□ 0.78
TUBB3-205ENST00000554336 OAZ1P54368 228 aa19.95■□□□□ 0.78
TUBB3-205ENST00000554336 PLS1Q14651 629 aa19.95■□□□□ 0.78
TUBB3-205ENST00000554336 SNRNP48Q6IEG0 339 aaKnown RBP19.95■□□□□ 0.78
TUBB3-205ENST00000554336 RIOX2Q8IUF8 465 aa19.95■□□□□ 0.78
TUBB3-205ENST00000554336 IL27Q8NEV9 243 aa19.95■□□□□ 0.78
TUBB3-205ENST00000554336 DEFB118Q96PH6 123 aa19.95■□□□□ 0.78
TUBB3-205ENST00000554336 TEX13BQ9BXU2 312 aa19.95■□□□□ 0.78
TUBB3-205ENST00000554336 ALPK3Q96L96 1907 aa19.95■□□□□ 0.78
TUBB3-205ENST00000554336 STAT3P40763 770 aa19.94■□□□□ 0.78
TUBB3-205ENST00000554336 CHRDL2Q6WN34 429 aa19.94■□□□□ 0.78
TUBB3-205ENST00000554336 CCDC83Q8IWF9 413 aa19.94■□□□□ 0.78
TUBB3-205ENST00000554336 PAK6Q9NQU5 681 aaPredicted RBP19.94■□□□□ 0.78
TUBB3-205ENST00000554336 ZNFX1Q9P2E3 1918 aaKnown RBP19.94■□□□□ 0.78
TUBB3-205ENST00000554336 TRIOBPQ9H2D6 2365 aa19.93■□□□□ 0.78
TUBB3-205ENST00000554336 PNMA6FA0A0J9YX94 578 aa19.93■□□□□ 0.78
TUBB3-205ENST00000554336 ERCC3P19447 782 aa19.93■□□□□ 0.78
TUBB3-205ENST00000554336 PKN1Q16512 942 aa19.93■□□□□ 0.78
TUBB3-205ENST00000554336 MUM1L1Q5H9M0 696 aa19.93■□□□□ 0.78
TUBB3-205ENST00000554336 NSUN7Q8NE18 718 aaKnown RBP19.93■□□□□ 0.78
TUBB3-205ENST00000554336 RRP36Q96EU6 259 aaKnown RBP19.93■□□□□ 0.78
TUBB3-205ENST00000554336 ZSCAN31Q96LW9 406 aaPredicted RBP19.93■□□□□ 0.78
TUBB3-205ENST00000554336 HTATIP2Q9BUP3 242 aa19.93■□□□□ 0.78
TUBB3-205ENST00000554336 SH2B1Q9NRF2 756 aaPredicted RBP19.93■□□□□ 0.78
TUBB3-205ENST00000554336 GJD2Q9UKL4 321 aa19.93■□□□□ 0.78
TUBB3-205ENST00000554336 CCPG1Q9ULG6 757 aa19.93■□□□□ 0.78
TUBB3-205ENST00000554336 V9GY48 417 aaPredicted RBP19.93■□□□□ 0.78
TUBB3-205ENST00000554336 OPLAHO14841 1288 aa19.92■□□□□ 0.78
TUBB3-205ENST00000554336 JAK2O60674 1132 aa19.92■□□□□ 0.78
TUBB3-205ENST00000554336 TFRCP02786 760 aaKnown RBP19.92■□□□□ 0.78
TUBB3-205ENST00000554336 TRIM32Q13049 653 aa19.92■□□□□ 0.78
TUBB3-205ENST00000554336 USH1GQ495M9 461 aa19.92■□□□□ 0.78
TUBB3-205ENST00000554336 TYW1BQ6NUM6 668 aa19.92■□□□□ 0.78
TUBB3-205ENST00000554336 SHCBP1Q8NEM2 672 aa19.92■□□□□ 0.78
TUBB3-205ENST00000554336 GPKOWQ92917 476 aaPredicted RBP eCLIP19.92■□□□□ 0.78
TUBB3-205ENST00000554336 SNX21Q969T3 373 aa19.92■□□□□ 0.78
TUBB3-205ENST00000554336 RNF26Q9BY78 433 aaPredicted RBP19.92■□□□□ 0.78
TUBB3-205ENST00000554336 HOMER2Q9NSB8 354 aa19.92■□□□□ 0.78
TUBB3-205ENST00000554336 PLXNA1Q9UIW2 1896 aa19.92■□□□□ 0.78
TUBB3-205ENST00000554336 NFIBO00712 420 aa19.91■□□□□ 0.78
TUBB3-205ENST00000554336 CPLX1O14810 134 aa19.91■□□□□ 0.78
TUBB3-205ENST00000554336 PRPF3O43395 683 aaKnown RBP19.91■□□□□ 0.78
TUBB3-205ENST00000554336 ALAS1P13196 640 aa19.91■□□□□ 0.78
TUBB3-205ENST00000554336 FDPSP14324 419 aaKnown RBP19.91■□□□□ 0.78
TUBB3-205ENST00000554336 SLC4A3P48751 1232 aa19.91■□□□□ 0.78
TUBB3-205ENST00000554336 MCM2P49736 904 aa19.91■□□□□ 0.78
TUBB3-205ENST00000554336 WWC2Q6AWC2 1192 aa19.91■□□□□ 0.78
TUBB3-205ENST00000554336 FBXO11Q86XK2 927 aa19.91■□□□□ 0.78
TUBB3-205ENST00000554336 CLEC4DQ8WXI8 215 aa19.91■□□□□ 0.78
TUBB3-205ENST00000554336 SLC26A6Q9BXS9 759 aa19.91■□□□□ 0.78
TUBB3-205ENST00000554336 RNF146Q9NTX7 359 aa19.91■□□□□ 0.78
TUBB3-205ENST00000554336 RBM27Q9P2N5 1060 aaKnown RBP19.91■□□□□ 0.78
TUBB3-205ENST00000554336 CTDP1Q9Y5B0 961 aaPredicted RBP19.91■□□□□ 0.78
TUBB3-205ENST00000554336 SZT2Q5T011 3432 aa19.91■□□□□ 0.78
TUBB3-205ENST00000554336 RANBP2P49792 3224 aaKnown RBP19.9■□□□□ 0.78
TUBB3-205ENST00000554336 PTPDC1A2A3K4 754 aa19.9■□□□□ 0.78
TUBB3-205ENST00000554336 CCNA1P78396 465 aa19.9■□□□□ 0.78
TUBB3-205ENST00000554336 GPR142Q7Z601 462 aa19.9■□□□□ 0.78
TUBB3-205ENST00000554336 NCAPG2Q86XI2 1143 aa19.9■□□□□ 0.78
TUBB3-205ENST00000554336 AIFM3Q96NN9 605 aa19.9■□□□□ 0.78
TUBB3-205ENST00000554336 AMNQ9BXJ7 453 aa19.9■□□□□ 0.78
TUBB3-205ENST00000554336 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.9■□□□□ 0.788e-7■■■■□ 24.2
TUBB3-205ENST00000554336 STK36Q9NRP7 1315 aa19.9■□□□□ 0.78
TUBB3-205ENST00000554336 SLC25A27O95847 323 aa19.89■□□□□ 0.77
TUBB3-205ENST00000554336 HMGCRP04035 888 aa19.89■□□□□ 0.77
TUBB3-205ENST00000554336 PFKFB3Q16875 520 aaPredicted RBP19.89■□□□□ 0.77
TUBB3-205ENST00000554336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.89■□□□□ 0.77
TUBB3-205ENST00000554336 SMARCC2Q8TAQ2 1214 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms