RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 AMNQ9BXJ7 453 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 LRRC2Q9BYS8 371 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 RNF208Q9H0X6 261 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 ALDH8A1Q9H2A2 487 aaPredicted RBP10.85□□□□□ -0.67
CHD8-206ENST00000553870 VAT1LQ9HCJ6 419 aa10.85□□□□□ -0.67
CHD8-206ENST00000553870 GPHNQ9NQX3 736 aaPredicted RBP10.85□□□□□ -0.67
CHD8-206ENST00000553870 RBM28Q9NW13 759 aaKnown RBP10.85□□□□□ -0.67
CHD8-206ENST00000553870 MAP3K20Q9NYL2 800 aaKnown RBP10.85□□□□□ -0.67
CHD8-206ENST00000553870 MRPL11Q9Y3B7 192 aaKnown RBP10.85□□□□□ -0.67
CHD8-206ENST00000553870 COL11A1P12107 1806 aaPredicted RBP10.85□□□□□ -0.67
CHD8-206ENST00000553870 ABCB11O95342 1321 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 PLXNB2O15031 1838 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 ZNF236Q9UL36 1845 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 PNMA6FA0A0J9YX94 578 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 POTEB2H3BUK9 544 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 ZBTB43O43298 467 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 EVCP57679 992 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 CACNB2Q08289 660 aaPredicted RBP10.84□□□□□ -0.67
CHD8-206ENST00000553870 COL9A3Q14050 684 aaPredicted RBP10.84□□□□□ -0.67
CHD8-206ENST00000553870 MTFR1Q15390 333 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 CCL14Q16627 93 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 QRICH1Q2TAL8 776 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 APOA5Q6Q788 366 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 Q6ZUG5 572 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 MCF2L2Q86YR7 1114 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 SP7Q8TDD2 431 aaPredicted RBP10.84□□□□□ -0.67
CHD8-206ENST00000553870 CLEC4DQ8WXI8 215 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 A1CFQ9NQ94 594 aaKnown RBP10.84□□□□□ -0.67
CHD8-206ENST00000553870 PAK6Q9NQU5 681 aaPredicted RBP10.84□□□□□ -0.67
CHD8-206ENST00000553870 HOMER2Q9NSB8 354 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 ADD3Q9UEY8 706 aaKnown RBP10.84□□□□□ -0.67
CHD8-206ENST00000553870 SYNGAP1Q96PV0 1343 aa10.84□□□□□ -0.67
CHD8-206ENST00000553870 ASB14A6NK59 587 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 B4DLN1 442 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 CYTH3O43739 400 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 MSCO60682 206 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 SGPL1O95470 568 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 PGK2P07205 417 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 PRKAR2AP13861 404 aaKnown RBP10.83□□□□□ -0.68
CHD8-206ENST00000553870 GJA8P48165 433 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 MRPL12P52815 198 aaKnown RBP10.83□□□□□ -0.68
CHD8-206ENST00000553870 C8orf34Q49A92 452 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 MUM1L1Q5H9M0 696 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 RNF207Q6ZRF8 634 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 TEX2Q8IWB9 1127 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 FAM133AQ8N9E0 248 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 RRP36Q96EU6 259 aaKnown RBP10.83□□□□□ -0.68
CHD8-206ENST00000553870 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.83□□□□□ -0.68
CHD8-206ENST00000553870 UNC93B1Q9H1C4 597 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 CPVLQ9H3G5 476 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 CYP39A1Q9NYL5 469 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 FLRT1Q9NZU1 646 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 BRPF3Q9ULD4 1205 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 GTF3C3Q9Y5Q9 886 aa10.83□□□□□ -0.68
CHD8-206ENST00000553870 ZNFX1Q9P2E3 1918 aaKnown RBP10.82□□□□□ -0.68
CHD8-206ENST00000553870 KLF18A0A0U1RQI7 1052 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 CYP2C19P33261 490 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 GHRHRQ02643 423 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 BAATQ14032 418 aaPredicted RBP10.82□□□□□ -0.68
CHD8-206ENST00000553870 ANKRD1Q15327 319 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 NSMFQ6X4W1 530 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 MICU3Q86XE3 530 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 DNERQ8NFT8 737 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 U2AF1L4Q8WU68 220 aaKnown RBP10.82□□□□□ -0.68
CHD8-206ENST00000553870 BRF1Q92994 677 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 ZNF274Q96GC6 653 aaPredicted RBP10.82□□□□□ -0.68
CHD8-206ENST00000553870 TCEANC2Q96MN5 208 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 PIGSQ96S52 555 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 MPHOSPH6Q99547 160 aaKnown RBP10.82□□□□□ -0.68
CHD8-206ENST00000553870 MYL10Q9BUA6 226 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 CRISPLD2Q9H0B8 497 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 PDRG1Q9NUG6 133 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 SEC63Q9UGP8 760 aaKnown RBP10.82□□□□□ -0.68
CHD8-206ENST00000553870 CNPY2Q9Y2B0 182 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 PCDHA1Q9Y5I3 950 aa10.82□□□□□ -0.68
CHD8-206ENST00000553870 PTPDC1A2A3K4 754 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 NFIBO00712 420 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 SEPT4O43236 478 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 SEC24BO95487 1268 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 CYBAP13498 195 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 RPS6P62753 249 aaKnown RBP10.81□□□□□ -0.68
CHD8-206ENST00000553870 TRIM32Q13049 653 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 RTN1Q16799 776 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 SLC35G1Q2M3R5 365 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 USH1GQ495M9 461 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 TMTC3Q6ZXV5 915 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 SRBD1Q8N5C6 995 aaKnown RBP10.81□□□□□ -0.68
CHD8-206ENST00000553870 ANKLE1Q8NAG6 615 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 MORC4Q8TE76 937 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 DEFB118Q96PH6 123 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 ABHD16BQ9H3Z7 469 aa10.81□□□□□ -0.68
CHD8-206ENST00000553870 RBM27Q9P2N5 1060 aaKnown RBP10.81□□□□□ -0.68
CHD8-206ENST00000553870 NID2Q14112 1375 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 KIAA0100Q14667 2235 aaKnown RBP10.8□□□□□ -0.68
CHD8-206ENST00000553870 POTEFA5A3E0 1075 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 SOWAHBA6NEL2 793 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 GOLGA8AA7E2F4 631 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 GOLGA8BA8MQT2 603 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 CAPN15O75808 1086 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms