RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 SHMT1P34896 483 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 NAPAP54920 295 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 USP49Q70CQ1 688 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 ZNF713Q8N859 430 aaPredicted RBP17.4■□□□□ 0.38
ABCD4-218ENST00000553486 EPSTI1Q96J88 318 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 ZMYND12Q9H0C1 365 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 C6orf50Q9HD87 102 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 DACH1Q9UI36 760 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 SERPINA10Q9UK55 444 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 MYH4Q9Y623 1939 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
ABCD4-218ENST00000553486 SMC2O95347 1197 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 SLFN14P0C7P3 912 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 PTGS1P23219 599 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 MLLT1Q03111 559 aaPredicted RBP17.4■□□□□ 0.38
ABCD4-218ENST00000553486 DLGAP5Q15398 846 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 MTMR14Q8NCE2 650 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 DHX58Q96C10 678 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 IDI2Q9BXS1 227 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 RIOX1Q9H6W3 641 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 GREB1LQ9C091 1923 aaPredicted RBP17.39■□□□□ 0.38
ABCD4-218ENST00000553486 ADAMTS3O15072 1205 aa17.39■□□□□ 0.37
ABCD4-218ENST00000553486 MYO1BO43795 1136 aa17.39■□□□□ 0.37
ABCD4-218ENST00000553486 SARSP49591 514 aaKnown RBP17.39■□□□□ 0.37
ABCD4-218ENST00000553486 NFIAQ12857 509 aa17.39■□□□□ 0.37
ABCD4-218ENST00000553486 NCAPHQ15003 741 aa17.39■□□□□ 0.37
ABCD4-218ENST00000553486 KCNF1Q9H3M0 494 aa17.39■□□□□ 0.37
ABCD4-218ENST00000553486 MAN1B1Q9UKM7 699 aa17.39■□□□□ 0.37
ABCD4-218ENST00000553486 SNHG28P0DPA3 235 aa17.38■□□□□ 0.37
ABCD4-218ENST00000553486 LONP1P36776 959 aaKnown RBP17.38■□□□□ 0.37
ABCD4-218ENST00000553486 MYL5Q02045 173 aa17.38■□□□□ 0.37
ABCD4-218ENST00000553486 ARMC9Q7Z3E5 817 aa17.38■□□□□ 0.37
ABCD4-218ENST00000553486 KRT25Q7Z3Z0 450 aa17.38■□□□□ 0.37
ABCD4-218ENST00000553486 HOMER1Q86YM7 354 aa17.38■□□□□ 0.37
ABCD4-218ENST00000553486 MLKLQ8NB16 471 aa17.38■□□□□ 0.37
ABCD4-218ENST00000553486 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
ABCD4-218ENST00000553486 DEFB129Q9H1M3 183 aa17.38■□□□□ 0.37
ABCD4-218ENST00000553486 VAT1LQ9HCJ6 419 aa17.38■□□□□ 0.37
ABCD4-218ENST00000553486 SMCO2A6NFE2 343 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 MPHOSPH10O00566 681 aaKnown RBP17.37■□□□□ 0.37
ABCD4-218ENST00000553486 NOLC1Q14978 699 aaKnown RBP eCLIP17.37■□□□□ 0.37
ABCD4-218ENST00000553486 RASGRP2Q7LDG7 609 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 LRRC47Q8N1G4 583 aaKnown RBP17.37■□□□□ 0.37
ABCD4-218ENST00000553486 C4orf32Q8N8J7 132 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 PIGSQ96S52 555 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 CPVLQ9H3G5 476 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 PI4KBQ9UBF8 816 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 NRBP1Q9UHY1 535 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 ESYT2A0FGR8 921 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 SPDYE2BA6NHP3 402 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 LAD1O00515 517 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 NEMFO60524 1076 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 PRR29P0C7W0 189 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 SPDYE6P0CI01 402 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 TXLNAP40222 546 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 PRKG1Q13976 671 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 MORC3Q14149 939 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 LDLRAD1Q5T700 205 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 SH3RF1Q7Z6J0 888 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 IQUBQ8NA54 791 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 SPATA20Q8TB22 786 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 NAP1L5Q96NT1 182 aaPredicted RBP17.37■□□□□ 0.37
ABCD4-218ENST00000553486 TRIM34Q9BYJ4 488 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 UBA5Q9GZZ9 404 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 PCDHAC2Q9Y5I4 1007 aa17.37■□□□□ 0.37
ABCD4-218ENST00000553486 FRMPD2Q68DX3 1309 aaPredicted RBP17.36■□□□□ 0.37
ABCD4-218ENST00000553486 TNRC18O15417 2968 aaPredicted RBP17.36■□□□□ 0.37
ABCD4-218ENST00000553486 A0A087X0B3 334 aa17.36■□□□□ 0.37
ABCD4-218ENST00000553486 TM4SF4P48230 202 aa17.36■□□□□ 0.37
ABCD4-218ENST00000553486 INF2Q27J81 1249 aa17.36■□□□□ 0.37
ABCD4-218ENST00000553486 CTU1Q7Z7A3 348 aaKnown RBP17.36■□□□□ 0.37
ABCD4-218ENST00000553486 KIAA1524Q8TCG1 905 aa17.36■□□□□ 0.37
ABCD4-218ENST00000553486 PAGE5Q96GU1 130 aa17.36■□□□□ 0.37
ABCD4-218ENST00000553486 SIPA1L1O43166 1804 aa17.36■□□□□ 0.37
ABCD4-218ENST00000553486 ZNF543Q08ER8 600 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 TCP10Q12799 353 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 MKRN3Q13064 507 aaKnown RBP17.35■□□□□ 0.37
ABCD4-218ENST00000553486 NONOQ15233 471 aaKnown RBP eCLIP17.35■□□□□ 0.37
ABCD4-218ENST00000553486 CFAP100Q494V2 611 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 CT47A1Q5JQC4 288 aaPredicted RBP17.35■□□□□ 0.37
ABCD4-218ENST00000553486 GPATCH4Q5T3I0 446 aaKnown RBP17.35■□□□□ 0.37
ABCD4-218ENST00000553486 DTHD1Q6ZMT9 781 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 ZFPM1Q8IX07 1006 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 GRAMD1CQ8IYS0 662 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 IMPACTQ9P2X3 320 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 FAM198AQ9UFP1 575 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 PPP2R3BQ9Y5P8 575 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 BMP6P22004 513 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 SREBF2Q12772 1141 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 IL17AQ16552 155 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 ZSCAN29Q8IWY8 852 aaPredicted RBP17.35■□□□□ 0.37
ABCD4-218ENST00000553486 PRMT6Q96LA8 375 aaPredicted RBP17.35■□□□□ 0.37
ABCD4-218ENST00000553486 GPCPD1Q9NPB8 672 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 SPTLC3Q9NUV7 552 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 IFNKQ9P0W0 207 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 FZD1Q9UP38 647 aa17.35■□□□□ 0.37
ABCD4-218ENST00000553486 HTTP42858 3142 aa17.34■□□□□ 0.37
ABCD4-218ENST00000553486 CLRN2A0PK11 232 aa17.34■□□□□ 0.37
ABCD4-218ENST00000553486 CBFA2T2O43439 604 aa17.34■□□□□ 0.37
ABCD4-218ENST00000553486 TBC1D8O95759 1140 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms