RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 MAD2L2Q9UI95 211 aa9.65□□□□□ -0.86
PCNX1-204ENST00000553428 COL11A1P12107 1806 aaPredicted RBP9.64□□□□□ -0.87
PCNX1-204ENST00000553428 CCDC69A6NI79 296 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 B4DLN1 442 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 DNM1LO00429 736 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 SH2B2O14492 632 aaPredicted RBP9.64□□□□□ -0.87
PCNX1-204ENST00000553428 DHX16O60231 1041 aaKnown RBP9.64□□□□□ -0.87
PCNX1-204ENST00000553428 SNAI1O95863 264 aaPredicted RBP9.64□□□□□ -0.87
PCNX1-204ENST00000553428 RARBP10826 455 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 SMARCA1P28370 1054 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 GNAQP50148 359 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 MNX1P50219 401 aaPredicted RBP9.64□□□□□ -0.87
PCNX1-204ENST00000553428 MRPL12P52815 198 aaKnown RBP9.64□□□□□ -0.87
PCNX1-204ENST00000553428 QRICH1Q2TAL8 776 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 NSMFQ6X4W1 530 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 RNF207Q6ZRF8 634 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 SGMS1Q86VZ5 419 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 FBXO11Q86XK2 927 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 MCF2L2Q86YR7 1114 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 STAG2Q8N3U4 1231 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 CTCFLQ8NI51 663 aaPredicted RBP9.64□□□□□ -0.87
PCNX1-204ENST00000553428 MORC4Q8TE76 937 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 CLEC4DQ8WXI8 215 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 MTMR8Q96EF0 704 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 PAWRQ96IZ0 340 aaKnown RBP9.64□□□□□ -0.87
PCNX1-204ENST00000553428 FGD4Q96M96 766 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 MPHOSPH6Q99547 160 aaKnown RBP9.64□□□□□ -0.87
PCNX1-204ENST00000553428 LZTS2Q9BRK4 669 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 C11orf49Q9H6J7 331 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 RIOX1Q9H6W3 641 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 JMJD4Q9H9V9 463 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 LY9Q9HBG7 655 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.64□□□□□ -0.87
PCNX1-204ENST00000553428 MAP3K20Q9NYL2 800 aaKnown RBP9.64□□□□□ -0.87
PCNX1-204ENST00000553428 FAM184BQ9ULE4 1060 aa9.64□□□□□ -0.87
PCNX1-204ENST00000553428 MRPL11Q9Y3B7 192 aaKnown RBP9.64□□□□□ -0.87
PCNX1-204ENST00000553428 PTPDC1A2A3K4 754 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 NFIBO00712 420 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 ZBTB5O15062 677 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 EIF5BO60841 1220 aaKnown RBP9.63□□□□□ -0.87
PCNX1-204ENST00000553428 COL6A1P12109 1028 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 HSPA4P34932 840 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 CNTN2Q02246 1040 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 ACVR2BQ13705 512 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 BAATQ14032 418 aaPredicted RBP9.63□□□□□ -0.87
PCNX1-204ENST00000553428 PRAMEF19Q5SWL8 479 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 NFXL1Q6ZNB6 911 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 DHX32Q7L7V1 743 aaKnown RBP9.63□□□□□ -0.87
PCNX1-204ENST00000553428 CHST3Q7LGC8 479 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 CCDC144CPQ8IYA2 1237 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 ZNF654Q8IZM8 581 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 DNERQ8NFT8 737 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 DIS3LQ8TF46 1054 aaKnown RBP9.63□□□□□ -0.87
PCNX1-204ENST00000553428 DPF3Q92784 378 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 AMNQ9BXJ7 453 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 SENP2Q9HC62 589 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 ZHX1Q9UKY1 873 aaPredicted RBP9.63□□□□□ -0.87
PCNX1-204ENST00000553428 NR2E3Q9Y5X4 410 aa9.63□□□□□ -0.87
PCNX1-204ENST00000553428 SOWAHBA6NEL2 793 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 KBTBD13C9JR72 458 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 DUSP11O75319 330 aaKnown RBP9.62□□□□□ -0.87
PCNX1-204ENST00000553428 TAL1P17542 331 aaPredicted RBP9.62□□□□□ -0.87
PCNX1-204ENST00000553428 PSMA5P28066 241 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 ALDH5A1P51649 535 aaPredicted RBP9.62□□□□□ -0.87
PCNX1-204ENST00000553428 RCAN1P53805 252 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 RPS6P62753 249 aaKnown RBP9.62□□□□□ -0.87
PCNX1-204ENST00000553428 EXOSC10Q01780 885 aaKnown RBP9.62□□□□□ -0.87
PCNX1-204ENST00000553428 USH1GQ495M9 461 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 SYNE3Q6ZMZ3 975 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 RNF180Q86T96 592 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 RASEFQ8IZ41 740 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 NUP133Q8WUM0 1156 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 TSEN34Q9BSV6 310 aaKnown RBP9.62□□□□□ -0.87
PCNX1-204ENST00000553428 SPZ1Q9BXG8 430 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 CPVLQ9H3G5 476 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 VAT1LQ9HCJ6 419 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 VTA1Q9NP79 307 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 XPNPEP3Q9NQH7 507 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 SLC12A7Q9Y666 1083 aa9.62□□□□□ -0.87
PCNX1-204ENST00000553428 PNMA6FA0A0J9YX94 578 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 EVI5O60447 810 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 CALML3P27482 149 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 CST5P28325 142 aaPredicted RBP9.61□□□□□ -0.87
PCNX1-204ENST00000553428 NKX3-2P78367 333 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 GHRHRQ02643 423 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 PPP2R5BQ15173 497 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 LRRC41Q15345 812 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 IQSEC1Q6DN90 963 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 FBXL16Q8N461 479 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 FANCBQ8NB91 859 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 KATNBL1Q9H079 304 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 SPC25Q9HBM1 224 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 Q9Y3F1 56 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 PCDHA1Q9Y5I3 950 aa9.61□□□□□ -0.87
PCNX1-204ENST00000553428 ASTN1O14525 1302 aa9.6□□□□□ -0.87
PCNX1-204ENST00000553428 MOXD2PA6NHM9 499 aa9.6□□□□□ -0.87
PCNX1-204ENST00000553428 CYTH3O43739 400 aa9.6□□□□□ -0.87
PCNX1-204ENST00000553428 ADAMTS4O75173 837 aa9.6□□□□□ -0.87
PCNX1-204ENST00000553428 EDNRBP24530 442 aa9.6□□□□□ -0.87
PCNX1-204ENST00000553428 HSD17B4P51659 736 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms