RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 RBBP6Q7Z6E9 1792 aaKnown RBP17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 NFIBO00712 420 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 IGHA2P01877 340 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 ALAS1P13196 640 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 PTPREP23469 700 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 COPB2P35606 906 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 PFKFB3Q16875 520 aaPredicted RBP17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 WWC2Q6AWC2 1192 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 PLEKHH3Q7Z736 793 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 CCDC83Q8IWF9 413 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 CHST13Q8NET6 341 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 ERO1AQ96HE7 468 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 TRERF1Q96PN7 1200 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 PNMA2Q9UL42 364 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 ABCB11O95342 1321 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 STK36Q9NRP7 1315 aa17.18■□□□□ 0.34
MTHFD1-204ENST00000553405 DNAJC25-GNG10A0A024R161 153 aa17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 JAK2O60674 1132 aa17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 CUL4AQ13619 759 aa17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 USH1GQ495M9 461 aa17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 NCAPG2Q86XI2 1143 aa17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 ABRAQ8N0Z2 381 aa17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 GPKOWQ92917 476 aaPredicted RBP eCLIP17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 COA7Q96BR5 231 aa17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 FGD4Q96M96 766 aa17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 SLC26A6Q9BXS9 759 aa17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 A1CFQ9NQ94 594 aaKnown RBP17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 HOMER2Q9NSB8 354 aa17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 PCDHA1Q9Y5I3 950 aa17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 ZNFX1Q9P2E3 1918 aaKnown RBP17.17■□□□□ 0.34
MTHFD1-204ENST00000553405 STXBP3O00186 592 aa17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 SCG2P13521 617 aa17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 FCGRTP55899 365 aa17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 OTOP1Q7RTM1 612 aa17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 RGS22Q8NE09 1264 aa17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 TBC1D5Q92609 795 aa17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 AIFM3Q96NN9 605 aa17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 ACAD9Q9H845 621 aa17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 PRDM10Q9NQV6 1147 aa17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 RBM27Q9P2N5 1060 aaKnown RBP17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 FBXO40Q9UH90 709 aa17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 GABRQQ9UN88 632 aa17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 CTDP1Q9Y5B0 961 aaPredicted RBP17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 ASTN1O14525 1302 aa17.16■□□□□ 0.34
MTHFD1-204ENST00000553405 PTPDC1A2A3K4 754 aa17.15■□□□□ 0.34
MTHFD1-204ENST00000553405 SLC15A5A6NIM6 579 aa17.15■□□□□ 0.34
MTHFD1-204ENST00000553405 TNPO2O14787 897 aaKnown RBP17.15■□□□□ 0.34
MTHFD1-204ENST00000553405 CPLX1O14810 134 aa17.15■□□□□ 0.34
MTHFD1-204ENST00000553405 STRNO43815 780 aa17.15■□□□□ 0.34
MTHFD1-204ENST00000553405 COBLO75128 1261 aa17.15■□□□□ 0.34
MTHFD1-204ENST00000553405 ECM2O94769 699 aaPredicted RBP17.15■□□□□ 0.34
MTHFD1-204ENST00000553405 HOXC6P09630 235 aa17.15■□□□□ 0.34
MTHFD1-204ENST00000553405 LLPHQ9BRT6 129 aaKnown RBP17.15■□□□□ 0.34
MTHFD1-204ENST00000553405 BARHL2Q9NY43 387 aa17.15■□□□□ 0.34
MTHFD1-204ENST00000553405 SEC63Q9UGP8 760 aaKnown RBP17.15■□□□□ 0.34
MTHFD1-204ENST00000553405 SRRDQ9UH36 339 aa17.15■□□□□ 0.34
MTHFD1-204ENST00000553405 ADAMTS3O15072 1205 aa17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 CDKL5O76039 1030 aa17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 DEXIO95424 95 aa17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 GNRH1P01148 92 aa17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 ADORA2AP29274 412 aa17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 HSD17B4P51659 736 aa17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 PRKCZQ05513 592 aa17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 SSRP1Q08945 709 aaKnown RBP17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 NPY5RQ15761 445 aa17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 FAM133AQ8N9E0 248 aa17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 MAF1Q9H063 256 aa17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 CYP39A1Q9NYL5 469 aa17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 MRPL11Q9Y3B7 192 aaKnown RBP17.14■□□□□ 0.33
MTHFD1-204ENST00000553405 hCG_1984214I3L0E3 225 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 FCER1AP12319 257 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 SLC4A3P48751 1232 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 FLT3LGP49771 235 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 RPS6P62753 249 aaKnown RBP17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 MAP2K5Q13163 448 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 KIF22Q14807 665 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 ZNF792Q3KQV3 632 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 PPP1R18Q6NYC8 613 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 CPLX2Q6PUV4 134 aaKnown RBP17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 SLC30A10Q6XR72 485 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 HEATR3Q7Z4Q2 680 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 ZNF713Q8N859 430 aaPredicted RBP17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 MMP19Q99542 508 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 COL20A1Q9P218 1284 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 PLXNA1Q9UIW2 1896 aa17.13■□□□□ 0.33
MTHFD1-204ENST00000553405 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
MTHFD1-204ENST00000553405 MEIS2O14770 477 aa17.12■□□□□ 0.33
MTHFD1-204ENST00000553405 PGK2P07205 417 aa17.12■□□□□ 0.33
MTHFD1-204ENST00000553405 TRAF1Q13077 416 aa17.12■□□□□ 0.33
MTHFD1-204ENST00000553405 IRF5Q13568 498 aa17.12■□□□□ 0.33
MTHFD1-204ENST00000553405 BAATQ14032 418 aaPredicted RBP17.12■□□□□ 0.33
MTHFD1-204ENST00000553405 TRIM22Q8IYM9 498 aa17.12■□□□□ 0.33
MTHFD1-204ENST00000553405 NPLOC4Q8TAT6 608 aa17.12■□□□□ 0.33
MTHFD1-204ENST00000553405 SYTL5Q8TDW5 730 aaPredicted RBP17.12■□□□□ 0.33
MTHFD1-204ENST00000553405 SOCS4Q8WXH5 440 aa17.12■□□□□ 0.33
MTHFD1-204ENST00000553405 PURBQ96QR8 312 aaKnown RBP17.12■□□□□ 0.33
MTHFD1-204ENST00000553405 ORC3Q9UBD5 711 aaPredicted RBP17.12■□□□□ 0.33
MTHFD1-204ENST00000553405 LRRC37A2A6NM11 1700 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 ESYT2A0FGR8 921 aa17.11■□□□□ 0.33
MTHFD1-204ENST00000553405 SOWAHBA6NEL2 793 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms