RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 TFAP4Q01664 338 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 PPARAQ07869 468 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 ACVR2BQ13705 512 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 KCNA10Q16322 511 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 CCDC96Q2M329 555 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 ARMCX2Q7L311 632 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 IFNL3Q8IZI9 196 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 GMCL1P1Q8NEA9 526 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 CHURC1Q8WUH1 139 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.75□□□□□ -0.53
ACTN1-208ENST00000553370 ABHD16BQ9H3Z7 469 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 SLC38A10Q9HBR0 1119 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 RNF146Q9NTX7 359 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 MTMR4Q9NYA4 1195 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 RIPK3Q9Y572 518 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 LCTP09848 1927 aa11.75□□□□□ -0.53
ACTN1-208ENST00000553370 A0A0U1RQG5 324 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-208ENST00000553370 KIAA0355O15063 1070 aa11.74□□□□□ -0.53
ACTN1-208ENST00000553370 RANBP6O60518 1105 aaKnown RBP11.74□□□□□ -0.53
ACTN1-208ENST00000553370 ADAMTS4O75173 837 aa11.74□□□□□ -0.53
ACTN1-208ENST00000553370 FDX1P10109 184 aa11.74□□□□□ -0.53
ACTN1-208ENST00000553370 ALAS1P13196 640 aa11.74□□□□□ -0.53
ACTN1-208ENST00000553370 CCDC144BQ3MJ40 725 aa11.74□□□□□ -0.53
ACTN1-208ENST00000553370 GNASQ5JWF2 1037 aa11.74□□□□□ -0.53
ACTN1-208ENST00000553370 CCDC129Q6ZRS4 1044 aa11.74□□□□□ -0.53
ACTN1-208ENST00000553370 FAM160B2Q86V87 743 aa11.74□□□□□ -0.53
ACTN1-208ENST00000553370 MYLIPQ8WY64 445 aa11.74□□□□□ -0.53
ACTN1-208ENST00000553370 CDX2Q99626 313 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-208ENST00000553370 AP5M1Q9H0R1 490 aa11.74□□□□□ -0.53
ACTN1-208ENST00000553370 SYNPO2Q9UMS6 1093 aa11.74□□□□□ -0.53
ACTN1-208ENST00000553370 PLIN4Q96Q06 1357 aa11.74□□□□□ -0.53
ACTN1-208ENST00000553370 ATP2A1O14983 1001 aa11.73□□□□□ -0.53
ACTN1-208ENST00000553370 ZEB2O60315 1214 aa11.73□□□□□ -0.53
ACTN1-208ENST00000553370 SNAI1O95863 264 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-208ENST00000553370 ASGR1P07306 291 aa11.73□□□□□ -0.53
ACTN1-208ENST00000553370 MX1P20591 662 aa11.73□□□□□ -0.53
ACTN1-208ENST00000553370 MCCP23508 829 aa11.73□□□□□ -0.53
ACTN1-208ENST00000553370 PPIGQ13427 754 aaKnown RBP eCLIP11.73□□□□□ -0.532e-13■■□□□ 13.5
ACTN1-208ENST00000553370 MAMDC4Q6UXC1 1216 aa11.73□□□□□ -0.53
ACTN1-208ENST00000553370 CCDC144CPQ8IYA2 1237 aa11.73□□□□□ -0.53
ACTN1-208ENST00000553370 NEDD1Q8NHV4 660 aa11.73□□□□□ -0.53
ACTN1-208ENST00000553370 SEMA6BQ9H3T3 888 aa11.73□□□□□ -0.53
ACTN1-208ENST00000553370 TRIP12Q14669 1992 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-208ENST00000553370 LAMA4Q16363 1823 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 ELP1O95163 1332 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 DNAJC25-GNG10A0A024R161 153 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 IGKV6D-41A0A0C4DH26 115 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 MYADML2A6NDP7 307 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 ASB14A6NK59 587 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-208ENST00000553370 TNFAIP2Q03169 654 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 CTDSPL2Q05D32 466 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 FAAP100Q0VG06 881 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 DSG2Q14126 1118 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 TKFCQ3LXA3 575 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 RRP12Q5JTH9 1297 aaKnown RBP11.72□□□□□ -0.53
ACTN1-208ENST00000553370 NSMFQ6X4W1 530 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 KCTD1Q719H9 257 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 HOMEZQ8IX15 550 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 TMEM199Q8N511 208 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 MKL1Q969V6 931 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 GMCL1Q96IK5 515 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 TOX2Q96NM4 488 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 TRERF1Q96PN7 1200 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 SEC62Q99442 399 aaKnown RBP11.72□□□□□ -0.53
ACTN1-208ENST00000553370 PPP1R12CQ9BZL4 782 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 MTIF3Q9H2K0 278 aaKnown RBP11.72□□□□□ -0.53
ACTN1-208ENST00000553370 CCPG1Q9ULG6 757 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 CDH23Q9H251 3354 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 MYH7BA7E2Y1 1941 aa11.72□□□□□ -0.53
ACTN1-208ENST00000553370 SCN5AQ14524 2016 aa11.71□□□□□ -0.53
ACTN1-208ENST00000553370 TMEM265A0A087WTH1 108 aa11.71□□□□□ -0.53
ACTN1-208ENST00000553370 TIMP1P01033 207 aa11.71□□□□□ -0.53
ACTN1-208ENST00000553370 DNAJB2P25686 324 aa11.71□□□□□ -0.53
ACTN1-208ENST00000553370 CST5P28325 142 aaPredicted RBP11.71□□□□□ -0.53
ACTN1-208ENST00000553370 BEX3Q00994 111 aa11.71□□□□□ -0.53
ACTN1-208ENST00000553370 CNTN2Q02246 1040 aa11.71□□□□□ -0.53
ACTN1-208ENST00000553370 ANKRD33Q7Z3H0 272 aa11.71□□□□□ -0.53
ACTN1-208ENST00000553370 TLK2Q86UE8 772 aa11.71□□□□□ -0.53
ACTN1-208ENST00000553370 TMC2Q8TDI7 906 aa11.71□□□□□ -0.53
ACTN1-208ENST00000553370 STAG1Q8WVM7 1258 aa11.71□□□□□ -0.53
ACTN1-208ENST00000553370 AGBL1Q96MI9 1066 aa11.71□□□□□ -0.53
ACTN1-208ENST00000553370 A1CFQ9NQ94 594 aaKnown RBP11.71□□□□□ -0.53
ACTN1-208ENST00000553370 KIAA1217Q5T5P2 1943 aa11.7□□□□□ -0.54
ACTN1-208ENST00000553370 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-208ENST00000553370 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-208ENST00000553370 ARVCFO00192 962 aa11.7□□□□□ -0.54
ACTN1-208ENST00000553370 ITGB8P26012 769 aa11.7□□□□□ -0.54
ACTN1-208ENST00000553370 EPHB4P54760 987 aa11.7□□□□□ -0.54
ACTN1-208ENST00000553370 GJA9P57773 515 aa11.7□□□□□ -0.54
ACTN1-208ENST00000553370 SNAP25P60880 206 aa11.7□□□□□ -0.54
ACTN1-208ENST00000553370 ZMYM1Q5SVZ6 1142 aa11.7□□□□□ -0.54
ACTN1-208ENST00000553370 MFSD5Q6N075 450 aa11.7□□□□□ -0.54
ACTN1-208ENST00000553370 PSRC1Q6PGN9 363 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-208ENST00000553370 EEPD1Q7L9B9 569 aa11.7□□□□□ -0.54
ACTN1-208ENST00000553370 KLHDC9Q8NEP7 349 aa11.7□□□□□ -0.54
ACTN1-208ENST00000553370 PI4K2BQ8TCG2 481 aa11.7□□□□□ -0.54
ACTN1-208ENST00000553370 OTUD7AQ8TE49 926 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-208ENST00000553370 TIFAQ96CG3 184 aa11.7□□□□□ -0.54
ACTN1-208ENST00000553370 GAS2L1Q99501 681 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms