RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 SNAI1O95863 264 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-204ENST00000553324 ZNF865P0CJ78 1059 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-204ENST00000553324 LIFRP42702 1097 aa17.86■□□□□ 0.45
SHMT2-204ENST00000553324 ANTXR2P58335 489 aa17.86■□□□□ 0.45
SHMT2-204ENST00000553324 CNTN2Q02246 1040 aa17.86■□□□□ 0.45
SHMT2-204ENST00000553324 TROAPQ12815 778 aa17.86■□□□□ 0.45
SHMT2-204ENST00000553324 ACVR2BQ13705 512 aa17.86■□□□□ 0.45
SHMT2-204ENST00000553324 GRM4Q14833 912 aa17.86■□□□□ 0.45
SHMT2-204ENST00000553324 CDC37Q16543 378 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-204ENST00000553324 MCF2L2Q86YR7 1114 aa17.86■□□□□ 0.45
SHMT2-204ENST00000553324 NEK1Q96PY6 1258 aa17.86■□□□□ 0.45
SHMT2-204ENST00000553324 MPHOSPH6Q99547 160 aaKnown RBP17.86■□□□□ 0.45
SHMT2-204ENST00000553324 JMJD4Q9H9V9 463 aa17.86■□□□□ 0.45
SHMT2-204ENST00000553324 VAT1LQ9HCJ6 419 aa17.86■□□□□ 0.45
SHMT2-204ENST00000553324 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-204ENST00000553324 CCDC69A6NI79 296 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 B4DLN1 442 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 EPB41L2O43491 1005 aaKnown RBP17.85■□□□□ 0.45
SHMT2-204ENST00000553324 EVI5O60447 810 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 ABCB11O95342 1321 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 HMGB1P09429 215 aaKnown RBP17.85■□□□□ 0.45
SHMT2-204ENST00000553324 KIF5BP33176 963 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 MNX1P50219 401 aaPredicted RBP17.85■□□□□ 0.45
SHMT2-204ENST00000553324 MRPL12P52815 198 aaKnown RBP17.85■□□□□ 0.45
SHMT2-204ENST00000553324 BAATQ14032 418 aaPredicted RBP17.85■□□□□ 0.45
SHMT2-204ENST00000553324 NFXL1Q6ZNB6 911 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 RNF207Q6ZRF8 634 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 ARMCX2Q7L311 632 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 FBXO11Q86XK2 927 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 CCDC144CPQ8IYA2 1237 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 STAG2Q8N3U4 1231 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 CLEC4DQ8WXI8 215 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 LY9Q9HBG7 655 aa17.85■□□□□ 0.45
SHMT2-204ENST00000553324 MRPL11Q9Y3B7 192 aaKnown RBP17.85■□□□□ 0.45
SHMT2-204ENST00000553324 PTPDC1A2A3K4 754 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 SOWAHBA6NEL2 793 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 KBTBD13C9JR72 458 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 NFIBO00712 420 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 DDAH1O94760 285 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 CALM1P0DP23 149 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 CALM2P0DP24 149 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 CALM3P0DP25 149 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 GNAQP50148 359 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 USH1GQ495M9 461 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 RNF180Q86T96 592 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 CTCFLQ8NI51 663 aaPredicted RBP17.84■□□□□ 0.45
SHMT2-204ENST00000553324 DIS3LQ8TF46 1054 aaKnown RBP17.84■□□□□ 0.45
SHMT2-204ENST00000553324 FGD4Q96M96 766 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 LZTS2Q9BRK4 669 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 AMNQ9BXJ7 453 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 CPVLQ9H3G5 476 aa17.84■□□□□ 0.45
SHMT2-204ENST00000553324 ZHX1Q9UKY1 873 aaPredicted RBP17.84■□□□□ 0.45
SHMT2-204ENST00000553324 ZNFX1Q9P2E3 1918 aaKnown RBP17.83■□□□□ 0.44
SHMT2-204ENST00000553324 SH2B2O14492 632 aaPredicted RBP17.83■□□□□ 0.44
SHMT2-204ENST00000553324 ZBTB5O15062 677 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 COL6A1P12109 1028 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 TAL1P17542 331 aaPredicted RBP17.83■□□□□ 0.44
SHMT2-204ENST00000553324 SMARCA1P28370 1054 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 QRICH1Q2TAL8 776 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 ANO1Q5XXA6 986 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 SYNE3Q6ZMZ3 975 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 DHX32Q7L7V1 743 aaKnown RBP17.83■□□□□ 0.44
SHMT2-204ENST00000553324 DNERQ8NFT8 737 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 NUP133Q8WUM0 1156 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 MTMR8Q96EF0 704 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 RIOX1Q9H6W3 641 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 SPC25Q9HBM1 224 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 XPNPEP3Q9NQH7 507 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 PDE4DIPQ5VU43 2346 aa17.83■□□□□ 0.44
SHMT2-204ENST00000553324 DUSP11O75319 330 aaKnown RBP17.82■□□□□ 0.44
SHMT2-204ENST00000553324 CALML3P27482 149 aa17.82■□□□□ 0.44
SHMT2-204ENST00000553324 RPS6P62753 249 aaKnown RBP17.82■□□□□ 0.44
SHMT2-204ENST00000553324 ZNF654Q8IZM8 581 aa17.82■□□□□ 0.44
SHMT2-204ENST00000553324 SAMD3Q8N6K7 520 aa17.82■□□□□ 0.44
SHMT2-204ENST00000553324 MORC4Q8TE76 937 aa17.82■□□□□ 0.44
SHMT2-204ENST00000553324 SENP6Q9GZR1 1112 aaPredicted RBP17.82■□□□□ 0.44
SHMT2-204ENST00000553324 SENP2Q9HC62 589 aa17.82■□□□□ 0.44
SHMT2-204ENST00000553324 MAP3K20Q9NYL2 800 aaKnown RBP17.82■□□□□ 0.44
SHMT2-204ENST00000553324 SLC12A7Q9Y666 1083 aa17.82■□□□□ 0.44
SHMT2-204ENST00000553324 LRRC41Q15345 812 aa17.81■□□□□ 0.44
SHMT2-204ENST00000553324 CCDC144BQ3MJ40 725 aa17.81■□□□□ 0.44
SHMT2-204ENST00000553324 GJC2Q5T442 439 aaPredicted RBP17.81■□□□□ 0.44
SHMT2-204ENST00000553324 IQSEC1Q6DN90 963 aa17.81■□□□□ 0.44
SHMT2-204ENST00000553324 SGMS1Q86VZ5 419 aa17.81■□□□□ 0.44
SHMT2-204ENST00000553324 KCNB2Q92953 911 aa17.81■□□□□ 0.44
SHMT2-204ENST00000553324 PNMA6FA0A0J9YX94 578 aa17.8■□□□□ 0.44
SHMT2-204ENST00000553324 EIF5BO60841 1220 aaKnown RBP17.8■□□□□ 0.44
SHMT2-204ENST00000553324 MYCNP04198 464 aaPredicted RBP17.8■□□□□ 0.44
SHMT2-204ENST00000553324 HSPA4P34932 840 aa17.8■□□□□ 0.44
SHMT2-204ENST00000553324 ALDH5A1P51649 535 aaPredicted RBP17.8■□□□□ 0.44
SHMT2-204ENST00000553324 EXOSC10Q01780 885 aaKnown RBP17.8■□□□□ 0.44
SHMT2-204ENST00000553324 RASEFQ8IZ41 740 aa17.8■□□□□ 0.44
SHMT2-204ENST00000553324 TSEN34Q9BSV6 310 aaKnown RBP17.8■□□□□ 0.44
SHMT2-204ENST00000553324 VTA1Q9NP79 307 aa17.8■□□□□ 0.44
SHMT2-204ENST00000553324 PCDHA1Q9Y5I3 950 aa17.8■□□□□ 0.44
SHMT2-204ENST00000553324 PSMA5P28066 241 aa17.79■□□□□ 0.44
SHMT2-204ENST00000553324 TNFAIP2Q03169 654 aa17.79■□□□□ 0.44
SHMT2-204ENST00000553324 SPZ1Q9BXG8 430 aa17.79■□□□□ 0.44
SHMT2-204ENST00000553324 KATNBL1Q9H079 304 aa17.79■□□□□ 0.44
SHMT2-204ENST00000553324 H0YGN5 161 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms