RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 RALYLQ86SE5 291 aaKnown RBP22.54■■□□□ 1.2
PTCH1-227ENST00000553256 C11orf49Q9H6J7 331 aa22.54■■□□□ 1.2
PTCH1-227ENST00000553256 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.54■■□□□ 1.2
PTCH1-227ENST00000553256 POTEB2H3BUK9 544 aa22.53■■□□□ 1.2
PTCH1-227ENST00000553256 CNGA1P29973 690 aa22.53■■□□□ 1.2
PTCH1-227ENST00000553256 CDC37Q16543 378 aaPredicted RBP22.53■■□□□ 1.2
PTCH1-227ENST00000553256 ARMCX2Q7L311 632 aa22.53■■□□□ 1.2
PTCH1-227ENST00000553256 CCDC144CPQ8IYA2 1237 aa22.53■■□□□ 1.2
PTCH1-227ENST00000553256 HTATIP2Q9BUP3 242 aa22.53■■□□□ 1.2
PTCH1-227ENST00000553256 PNMA2Q9UL42 364 aa22.53■■□□□ 1.2
PTCH1-227ENST00000553256 DDX49Q9Y6V7 483 aaKnown RBP22.53■■□□□ 1.2
PTCH1-227ENST00000553256 LRRC37A2A6NM11 1700 aa22.52■■□□□ 1.2
PTCH1-227ENST00000553256 DNM1LO00429 736 aa22.52■■□□□ 1.2
PTCH1-227ENST00000553256 SH2B2O14492 632 aaPredicted RBP22.52■■□□□ 1.2
PTCH1-227ENST00000553256 CYTH3O43739 400 aa22.52■■□□□ 1.2
PTCH1-227ENST00000553256 PPP1R11O60927 126 aaPredicted RBP22.52■■□□□ 1.2
PTCH1-227ENST00000553256 BAATQ14032 418 aaPredicted RBP22.52■■□□□ 1.2
PTCH1-227ENST00000553256 WTAPQ15007 396 aa22.52■■□□□ 1.2
PTCH1-227ENST00000553256 QRICH1Q2TAL8 776 aa22.52■■□□□ 1.2
PTCH1-227ENST00000553256 ANO1Q5XXA6 986 aa22.52■■□□□ 1.2
PTCH1-227ENST00000553256 RGS22Q8NE09 1264 aa22.52■■□□□ 1.2
PTCH1-227ENST00000553256 RIOX1Q9H6W3 641 aa22.52■■□□□ 1.2
PTCH1-227ENST00000553256 MCM3APO60318 1980 aa22.52■■□□□ 1.2
PTCH1-227ENST00000553256 KLRF2D3W0D1 207 aa22.51■■□□□ 1.19
PTCH1-227ENST00000553256 H0YGN5 161 aa22.51■■□□□ 1.19
PTCH1-227ENST00000553256 OPLAHO14841 1288 aa22.51■■□□□ 1.19
PTCH1-227ENST00000553256 ADAMTS4O75173 837 aa22.51■■□□□ 1.19
PTCH1-227ENST00000553256 GHRHRQ02643 423 aa22.51■■□□□ 1.19
PTCH1-227ENST00000553256 ACVR2BQ13705 512 aa22.51■■□□□ 1.19
PTCH1-227ENST00000553256 LENG1Q96BZ8 264 aaPredicted RBP22.51■■□□□ 1.19
PTCH1-227ENST00000553256 MAF1Q9H063 256 aa22.51■■□□□ 1.19
PTCH1-227ENST00000553256 PRC1O43663 620 aa22.5■■□□□ 1.19
PTCH1-227ENST00000553256 AKR1A1P14550 325 aa22.5■■□□□ 1.19
PTCH1-227ENST00000553256 NKX3-2P78367 333 aa22.5■■□□□ 1.19
PTCH1-227ENST00000553256 EXOSC10Q01780 885 aaKnown RBP22.5■■□□□ 1.19
PTCH1-227ENST00000553256 LRRC41Q15345 812 aa22.5■■□□□ 1.19
PTCH1-227ENST00000553256 ADCK5Q3MIX3 580 aa22.5■■□□□ 1.19
PTCH1-227ENST00000553256 TMEM67Q5HYA8 995 aa22.5■■□□□ 1.19
PTCH1-227ENST00000553256 CCSAPQ6IQ19 270 aaPredicted RBP22.5■■□□□ 1.19
PTCH1-227ENST00000553256 SLC30A10Q6XR72 485 aa22.5■■□□□ 1.19
PTCH1-227ENST00000553256 MAP3K14Q99558 947 aa22.5■■□□□ 1.19
PTCH1-227ENST00000553256 PRO3102Q9H379 93 aa22.5■■□□□ 1.19
PTCH1-227ENST00000553256 ABHD16BQ9H3Z7 469 aa22.5■■□□□ 1.19
PTCH1-227ENST00000553256 CNPY2Q9Y2B0 182 aa22.5■■□□□ 1.19
PTCH1-227ENST00000553256 EDNRBP24530 442 aa22.49■■□□□ 1.19
PTCH1-227ENST00000553256 MCM5P33992 734 aa22.49■■□□□ 1.19
PTCH1-227ENST00000553256 LIFRP42702 1097 aa22.49■■□□□ 1.19
PTCH1-227ENST00000553256 RPS6P62753 249 aaKnown RBP22.49■■□□□ 1.19
PTCH1-227ENST00000553256 NSMFQ6X4W1 530 aa22.49■■□□□ 1.19
PTCH1-227ENST00000553256 TBC1D5Q92609 795 aa22.49■■□□□ 1.19
PTCH1-227ENST00000553256 LOC102724159A0A0B4J2E5 919 aa22.48■■□□□ 1.19
PTCH1-227ENST00000553256 CTAGE5O15320 804 aa22.48■■□□□ 1.19
PTCH1-227ENST00000553256 CENPBP07199 599 aaPredicted RBP22.48■■□□□ 1.19
PTCH1-227ENST00000553256 SART3Q15020 963 aaKnown RBP22.48■■□□□ 1.19
PTCH1-227ENST00000553256 PWP2Q15269 919 aaKnown RBP22.48■■□□□ 1.19
PTCH1-227ENST00000553256 LRRC26Q2I0M4 334 aa22.48■■□□□ 1.19
PTCH1-227ENST00000553256 GJC2Q5T442 439 aaPredicted RBP22.48■■□□□ 1.19
PTCH1-227ENST00000553256 TAPT1Q6NXT6 567 aa22.48■■□□□ 1.19
PTCH1-227ENST00000553256 SGMS1Q86VZ5 419 aa22.48■■□□□ 1.19
PTCH1-227ENST00000553256 KLHDC9Q8NEP7 349 aa22.48■■□□□ 1.19
PTCH1-227ENST00000553256 TMEM87BQ96K49 555 aa22.48■■□□□ 1.19
PTCH1-227ENST00000553256 ASB14A6NK59 587 aa22.47■■□□□ 1.19
PTCH1-227ENST00000553256 SNX17Q15036 470 aa22.47■■□□□ 1.19
PTCH1-227ENST00000553256 CCDC144BQ3MJ40 725 aa22.47■■□□□ 1.19
PTCH1-227ENST00000553256 ZNF654Q8IZM8 581 aa22.47■■□□□ 1.19
PTCH1-227ENST00000553256 ARRDC4Q8NCT1 418 aa22.47■■□□□ 1.19
PTCH1-227ENST00000553256 DPF3Q92784 378 aa22.47■■□□□ 1.19
PTCH1-227ENST00000553256 UPF3AQ9H1J1 476 aaKnown RBP22.47■■□□□ 1.19
PTCH1-227ENST00000553256 COL20A1Q9P218 1284 aa22.47■■□□□ 1.19
PTCH1-227ENST00000553256 FAM184BQ9ULE4 1060 aa22.47■■□□□ 1.19
PTCH1-227ENST00000553256 ABCB11O95342 1321 aa22.47■■□□□ 1.19
PTCH1-227ENST00000553256 ERICH2A1L162 156 aa22.46■■□□□ 1.19
PTCH1-227ENST00000553256 ZBTB5O15062 677 aa22.46■■□□□ 1.19
PTCH1-227ENST00000553256 DUSP11O75319 330 aaKnown RBP22.46■■□□□ 1.19
PTCH1-227ENST00000553256 DDAH1O94760 285 aa22.46■■□□□ 1.19
PTCH1-227ENST00000553256 RARBP10826 455 aa22.46■■□□□ 1.19
PTCH1-227ENST00000553256 HSPA4P34932 840 aa22.46■■□□□ 1.19
PTCH1-227ENST00000553256 ALDH5A1P51649 535 aaPredicted RBP22.46■■□□□ 1.19
PTCH1-227ENST00000553256 USH1GQ495M9 461 aa22.46■■□□□ 1.19
PTCH1-227ENST00000553256 CASC1Q6TDU7 716 aa22.46■■□□□ 1.19
PTCH1-227ENST00000553256 RNF207Q6ZRF8 634 aa22.46■■□□□ 1.19
PTCH1-227ENST00000553256 XPNPEP3Q9NQH7 507 aa22.46■■□□□ 1.19
PTCH1-227ENST00000553256 ZHX1Q9UKY1 873 aaPredicted RBP22.46■■□□□ 1.19
PTCH1-227ENST00000553256 PHF24Q9UPV7 400 aa22.46■■□□□ 1.19
PTCH1-227ENST00000553256 GNEQ9Y223 722 aaKnown RBP22.46■■□□□ 1.19
PTCH1-227ENST00000553256 SYNRGQ9UMZ2 1314 aa22.46■■□□□ 1.19
PTCH1-227ENST00000553256 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.45■■□□□ 1.18
PTCH1-227ENST00000553256 PGK1P00558 417 aa22.45■■□□□ 1.18
PTCH1-227ENST00000553256 CST5P28325 142 aaPredicted RBP22.45■■□□□ 1.18
PTCH1-227ENST00000553256 IRX5P78411 483 aaPredicted RBP22.45■■□□□ 1.18
PTCH1-227ENST00000553256 TMEM63BQ5T3F8 832 aa22.45■■□□□ 1.18
PTCH1-227ENST00000553256 FBXO11Q86XK2 927 aa22.45■■□□□ 1.18
PTCH1-227ENST00000553256 SYTL5Q8TDW5 730 aaPredicted RBP22.45■■□□□ 1.18
PTCH1-227ENST00000553256 NEK1Q96PY6 1258 aa22.45■■□□□ 1.18
PTCH1-227ENST00000553256 MYL10Q9BUA6 226 aa22.45■■□□□ 1.18
PTCH1-227ENST00000553256 VAT1LQ9HCJ6 419 aa22.45■■□□□ 1.18
PTCH1-227ENST00000553256 RBM47A0AV96 593 aaKnown RBP22.44■■□□□ 1.18
PTCH1-227ENST00000553256 MYADML2A6NDP7 307 aa22.44■■□□□ 1.18
PTCH1-227ENST00000553256 SMARCA1P28370 1054 aa22.44■■□□□ 1.18
PTCH1-227ENST00000553256 RNF20Q5VTR2 975 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms