RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 KRT23Q9C075 422 aa18.64■□□□□ 0.57
CDK4-215ENST00000553237 KATNBL1Q9H079 304 aa18.64■□□□□ 0.57
CDK4-215ENST00000553237 KAT14Q9H8E8 782 aa18.64■□□□□ 0.57
CDK4-215ENST00000553237 ASTN1O14525 1302 aa18.64■□□□□ 0.57
CDK4-215ENST00000553237 A0A1W2PQ45 241 aaPredicted RBP18.63■□□□□ 0.57
CDK4-215ENST00000553237 A0A1W2PQY0 241 aa18.63■□□□□ 0.57
CDK4-215ENST00000553237 ASB14A6NK59 587 aa18.63■□□□□ 0.57
CDK4-215ENST00000553237 NFIBO00712 420 aa18.63■□□□□ 0.57
CDK4-215ENST00000553237 C6orf222P0C671 652 aaPredicted RBP18.63■□□□□ 0.57
CDK4-215ENST00000553237 NT5C2P49902 561 aa18.63■□□□□ 0.57
CDK4-215ENST00000553237 PTH1RQ03431 593 aa18.63■□□□□ 0.57
CDK4-215ENST00000553237 KCNA10Q16322 511 aa18.63■□□□□ 0.57
CDK4-215ENST00000553237 NOL8Q76FK4 1167 aaKnown RBP18.63■□□□□ 0.57
CDK4-215ENST00000553237 EEPD1Q7L9B9 569 aa18.63■□□□□ 0.57
CDK4-215ENST00000553237 ENAHQ8N8S7 591 aaPredicted RBP18.63■□□□□ 0.57
CDK4-215ENST00000553237 ANKS1AQ92625 1134 aa18.63■□□□□ 0.57
CDK4-215ENST00000553237 LRCH3Q96II8 777 aa18.63■□□□□ 0.57
CDK4-215ENST00000553237 TNKSO95271 1327 aa18.63■□□□□ 0.57
CDK4-215ENST00000553237 MCM3APO60318 1980 aa18.62■□□□□ 0.57
CDK4-215ENST00000553237 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.62■□□□□ 0.57
CDK4-215ENST00000553237 PTPDC1A2A3K4 754 aa18.62■□□□□ 0.57
CDK4-215ENST00000553237 ACLYP53396 1101 aa18.62■□□□□ 0.57
CDK4-215ENST00000553237 TLE2Q04725 743 aa18.62■□□□□ 0.57
CDK4-215ENST00000553237 GPATCH4Q5T3I0 446 aaKnown RBP18.62■□□□□ 0.57
CDK4-215ENST00000553237 SH3RF1Q7Z6J0 888 aa18.62■□□□□ 0.57
CDK4-215ENST00000553237 TDHQ8IZJ6 230 aa18.62■□□□□ 0.57
CDK4-215ENST00000553237 TSEN34Q9BSV6 310 aaKnown RBP18.62■□□□□ 0.57
CDK4-215ENST00000553237 CNNM2Q9H8M5 875 aa18.62■□□□□ 0.57
CDK4-215ENST00000553237 RAD50Q92878 1312 aa18.62■□□□□ 0.57
CDK4-215ENST00000553237 LAMA4Q16363 1823 aa18.61■□□□□ 0.57
CDK4-215ENST00000553237 TNFAIP2Q03169 654 aa18.61■□□□□ 0.57
CDK4-215ENST00000553237 C1orf53Q5VUE5 145 aa18.61■□□□□ 0.57
CDK4-215ENST00000553237 CCSAPQ6IQ19 270 aaPredicted RBP18.61■□□□□ 0.57
CDK4-215ENST00000553237 CLEC4DQ8WXI8 215 aa18.61■□□□□ 0.57
CDK4-215ENST00000553237 UBAC1Q9BSL1 405 aa18.61■□□□□ 0.57
CDK4-215ENST00000553237 SPC25Q9HBM1 224 aa18.61■□□□□ 0.57
CDK4-215ENST00000553237 PDGFCQ9NRA1 345 aa18.61■□□□□ 0.57
CDK4-215ENST00000553237 DNAH12Q6ZR08 3092 aa18.61■□□□□ 0.57
CDK4-215ENST00000553237 PQBP1O60828 265 aaKnown RBP18.6■□□□□ 0.57
CDK4-215ENST00000553237 PTGS1P23219 599 aa18.6■□□□□ 0.57
CDK4-215ENST00000553237 CALML3P27482 149 aa18.6■□□□□ 0.57
CDK4-215ENST00000553237 GJA9P57773 515 aa18.6■□□□□ 0.57
CDK4-215ENST00000553237 USH1GQ495M9 461 aa18.6■□□□□ 0.57
CDK4-215ENST00000553237 GNASQ5JWF2 1037 aa18.6■□□□□ 0.57
CDK4-215ENST00000553237 CYB5R4Q7L1T6 521 aa18.6■□□□□ 0.57
CDK4-215ENST00000553237 FBXO16Q8IX29 292 aaPredicted RBP18.6■□□□□ 0.57
CDK4-215ENST00000553237 VTI1AQ96AJ9 217 aa18.6■□□□□ 0.57
CDK4-215ENST00000553237 UPF3AQ9H1J1 476 aaKnown RBP18.6■□□□□ 0.57
CDK4-215ENST00000553237 STARD7Q9NQZ5 370 aa18.6■□□□□ 0.57
CDK4-215ENST00000553237 PDLIM7Q9NR12 457 aa18.6■□□□□ 0.57
CDK4-215ENST00000553237 TRIM43BA6NCK2 446 aa18.59■□□□□ 0.57
CDK4-215ENST00000553237 MOXD2PA6NHM9 499 aa18.59■□□□□ 0.57
CDK4-215ENST00000553237 SGSM2O43147 1006 aa18.59■□□□□ 0.57
CDK4-215ENST00000553237 ASGR1P07306 291 aa18.59■□□□□ 0.57
CDK4-215ENST00000553237 CYP21A2P08686 494 aa18.59■□□□□ 0.57
CDK4-215ENST00000553237 BEX3Q00994 111 aa18.59■□□□□ 0.57
CDK4-215ENST00000553237 IFIT1BQ5T764 474 aaKnown RBP18.59■□□□□ 0.57
CDK4-215ENST00000553237 SLC30A10Q6XR72 485 aa18.59■□□□□ 0.57
CDK4-215ENST00000553237 RNF207Q6ZRF8 634 aa18.59■□□□□ 0.57
CDK4-215ENST00000553237 ADGRF4Q8IZF3 695 aa18.59■□□□□ 0.57
CDK4-215ENST00000553237 NUP133Q8WUM0 1156 aa18.59■□□□□ 0.57
CDK4-215ENST00000553237 TRIM43Q96BQ3 446 aaPredicted RBP18.59■□□□□ 0.57
CDK4-215ENST00000553237 VAT1LQ9HCJ6 419 aa18.59■□□□□ 0.57
CDK4-215ENST00000553237 PNMA2Q9UL42 364 aa18.59■□□□□ 0.57
CDK4-215ENST00000553237 U3KPZ7 1027 aaPredicted RBP18.59■□□□□ 0.57
CDK4-215ENST00000553237 WDR19Q8NEZ3 1342 aa18.58■□□□□ 0.57
CDK4-215ENST00000553237 DHX16O60231 1041 aaKnown RBP18.58■□□□□ 0.56
CDK4-215ENST00000553237 PARP1P09874 1014 aaKnown RBP18.58■□□□□ 0.56
CDK4-215ENST00000553237 SMPD1P17405 629 aa18.58■□□□□ 0.56
CDK4-215ENST00000553237 CST5P28325 142 aaPredicted RBP18.58■□□□□ 0.56
CDK4-215ENST00000553237 ALDH5A1P51649 535 aaPredicted RBP18.58■□□□□ 0.56
CDK4-215ENST00000553237 TRDNQ13061 729 aa18.58■□□□□ 0.56
CDK4-215ENST00000553237 CDC37Q16543 378 aaPredicted RBP18.58■□□□□ 0.56
CDK4-215ENST00000553237 ASPRV1Q53RT3 343 aa18.58■□□□□ 0.56
CDK4-215ENST00000553237 TMEM63BQ5T3F8 832 aa18.58■□□□□ 0.56
CDK4-215ENST00000553237 TAPT1Q6NXT6 567 aa18.58■□□□□ 0.56
CDK4-215ENST00000553237 PCSK9Q8NBP7 692 aaKnown RBP18.58■□□□□ 0.56
CDK4-215ENST00000553237 BADQ92934 168 aa18.58■□□□□ 0.56
CDK4-215ENST00000553237 ADD3Q9UEY8 706 aaKnown RBP18.58■□□□□ 0.56
CDK4-215ENST00000553237 TAF6LQ9Y6J9 622 aa18.58■□□□□ 0.56
CDK4-215ENST00000553237 SZT2Q5T011 3432 aa18.57■□□□□ 0.56
CDK4-215ENST00000553237 CTAGE5O15320 804 aa18.57■□□□□ 0.56
CDK4-215ENST00000553237 DYNC1LI2O43237 492 aaPredicted RBP18.57■□□□□ 0.56
CDK4-215ENST00000553237 CLTBP09497 229 aa18.57■□□□□ 0.56
CDK4-215ENST00000553237 RPS6P62753 249 aaKnown RBP18.57■□□□□ 0.56
CDK4-215ENST00000553237 SEC23AQ15436 765 aa18.57■□□□□ 0.56
CDK4-215ENST00000553237 LRIT3Q3SXY7 679 aa18.57■□□□□ 0.56
CDK4-215ENST00000553237 IQSEC1Q6DN90 963 aa18.57■□□□□ 0.56
CDK4-215ENST00000553237 KIAA1211Q6ZU35 1233 aa18.57■□□□□ 0.56
CDK4-215ENST00000553237 TLK2Q86UE8 772 aa18.57■□□□□ 0.56
CDK4-215ENST00000553237 MORC4Q8TE76 937 aa18.57■□□□□ 0.56
CDK4-215ENST00000553237 GLT1D1Q96MS3 346 aa18.57■□□□□ 0.56
CDK4-215ENST00000553237 GNEQ9Y223 722 aaKnown RBP18.57■□□□□ 0.56
CDK4-215ENST00000553237 ITGB8P26012 769 aa18.56■□□□□ 0.56
CDK4-215ENST00000553237 SKAP1Q86WV1 359 aa18.56■□□□□ 0.56
CDK4-215ENST00000553237 STAG2Q8N3U4 1231 aa18.56■□□□□ 0.56
CDK4-215ENST00000553237 TBC1D5Q92609 795 aa18.56■□□□□ 0.56
CDK4-215ENST00000553237 AP5M1Q9H0R1 490 aa18.56■□□□□ 0.56
CDK4-215ENST00000553237 VTA1Q9NP79 307 aa18.56■□□□□ 0.56
CDK4-215ENST00000553237 TMEM39AQ9NV64 488 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms