RNA–Protein interactions for RNA: ENST00000552487.1

ATF1-204, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-204ENST00000552487 TCP11L1Q9NUJ3 509 aa13□□□□□ -0.33
ATF1-204ENST00000552487 SLC16A2P36021 539 aa12.99□□□□□ -0.33
ATF1-204ENST00000552487 SNAP25P60880 206 aa12.99□□□□□ -0.33
ATF1-204ENST00000552487 CNTN2Q02246 1040 aa12.99□□□□□ -0.33
ATF1-204ENST00000552487 TLK2Q86UE8 772 aa12.99□□□□□ -0.33
ATF1-204ENST00000552487 EXOC6Q8TAG9 804 aa12.99□□□□□ -0.33
ATF1-204ENST00000552487 TMEM47Q9BQJ4 181 aa12.99□□□□□ -0.33
ATF1-204ENST00000552487 VTA1Q9NP79 307 aa12.99□□□□□ -0.33
ATF1-204ENST00000552487 INCENPQ9NQS7 918 aa12.99□□□□□ -0.33
ATF1-204ENST00000552487 IL17RBQ9NRM6 502 aa12.99□□□□□ -0.33
ATF1-204ENST00000552487 ERICH2A1L162 156 aa12.98□□□□□ -0.33
ATF1-204ENST00000552487 ADAMTS4O75173 837 aa12.98□□□□□ -0.33
ATF1-204ENST00000552487 ASGR1P07306 291 aa12.98□□□□□ -0.33
ATF1-204ENST00000552487 CALML3P27482 149 aa12.98□□□□□ -0.33
ATF1-204ENST00000552487 CST5P28325 142 aaPredicted RBP12.98□□□□□ -0.33
ATF1-204ENST00000552487 PDE4DQ08499 809 aa12.98□□□□□ -0.33
ATF1-204ENST00000552487 PPIGQ13427 754 aaKnown RBP eCLIP12.98□□□□□ -0.33
ATF1-204ENST00000552487 FSCN1Q16658 493 aaKnown RBP12.98□□□□□ -0.33
ATF1-204ENST00000552487 KIAA1211Q6ZU35 1233 aa12.98□□□□□ -0.33
ATF1-204ENST00000552487 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
ATF1-204ENST00000552487 TMEM199Q8N511 208 aa12.98□□□□□ -0.33
ATF1-204ENST00000552487 FAM133AQ8N9E0 248 aa12.98□□□□□ -0.33
ATF1-204ENST00000552487 TOX2Q96NM4 488 aa12.98□□□□□ -0.33
ATF1-204ENST00000552487 SEZ6LQ9BYH1 1024 aa12.98□□□□□ -0.33
ATF1-204ENST00000552487 CYP39A1Q9NYL5 469 aa12.98□□□□□ -0.33
ATF1-204ENST00000552487 LOC102724159A0A0B4J2E5 919 aa12.97□□□□□ -0.33
ATF1-204ENST00000552487 DYNC1LI2O43237 492 aaPredicted RBP12.97□□□□□ -0.33
ATF1-204ENST00000552487 FGRP09769 529 aa12.97□□□□□ -0.33
ATF1-204ENST00000552487 PDHBP11177 359 aa12.97□□□□□ -0.33
ATF1-204ENST00000552487 GJA9P57773 515 aa12.97□□□□□ -0.33
ATF1-204ENST00000552487 SART3Q15020 963 aaKnown RBP12.97□□□□□ -0.33
ATF1-204ENST00000552487 PWP2Q15269 919 aaKnown RBP12.97□□□□□ -0.33
ATF1-204ENST00000552487 IQSEC1Q6DN90 963 aa12.97□□□□□ -0.33
ATF1-204ENST00000552487 RNF207Q6ZRF8 634 aa12.97□□□□□ -0.33
ATF1-204ENST00000552487 EEPD1Q7L9B9 569 aa12.97□□□□□ -0.33
ATF1-204ENST00000552487 DGKHQ86XP1 1220 aa12.97□□□□□ -0.33
ATF1-204ENST00000552487 PLEKHM2Q8IWE5 1019 aa12.97□□□□□ -0.33
ATF1-204ENST00000552487 DSCC1Q9BVC3 393 aa12.97□□□□□ -0.33
ATF1-204ENST00000552487 RANBP17Q9H2T7 1088 aaKnown RBP12.97□□□□□ -0.33
ATF1-204ENST00000552487 OSBPL3Q9H4L5 887 aa12.97□□□□□ -0.33
ATF1-204ENST00000552487 RANBP2P49792 3224 aaKnown RBP12.97□□□□□ -0.33
ATF1-204ENST00000552487 RLFQ13129 1914 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 ARVCFO00192 962 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 KIAA0355O15063 1070 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 FOXP2O15409 715 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 KDM4AO75164 1064 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 CPT1AP50416 773 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 ZNF543Q08ER8 600 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 TRAF1Q13077 416 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 BAATQ14032 418 aaPredicted RBP12.96□□□□□ -0.33
ATF1-204ENST00000552487 PPP2R5BQ15173 497 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 USH1GQ495M9 461 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 ASPRV1Q53RT3 343 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 MUM1L1Q5H9M0 696 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 TTBK2Q6IQ55 1244 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 BTNL9Q6UXG8 535 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 Q7L0L9 218 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 ANKRD33Q7Z3H0 272 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 RALYLQ86SE5 291 aaKnown RBP12.96□□□□□ -0.33
ATF1-204ENST00000552487 MCF2L2Q86YR7 1114 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 FBXO16Q8IX29 292 aaPredicted RBP12.96□□□□□ -0.33
ATF1-204ENST00000552487 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 KLHDC9Q8NEP7 349 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 ZKSCAN3Q9BRR0 538 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 UPF3AQ9H1J1 476 aaKnown RBP12.96□□□□□ -0.33
ATF1-204ENST00000552487 STXBP5LQ9Y2K9 1186 aa12.96□□□□□ -0.33
ATF1-204ENST00000552487 GREB1LQ9C091 1923 aaPredicted RBP12.96□□□□□ -0.34
ATF1-204ENST00000552487 MYH4Q9Y623 1939 aa12.96□□□□□ -0.34
ATF1-204ENST00000552487 ZNF536O15090 1300 aa12.95□□□□□ -0.34
ATF1-204ENST00000552487 WDR19Q8NEZ3 1342 aa12.95□□□□□ -0.34
ATF1-204ENST00000552487 TRIM43BA6NCK2 446 aa12.95□□□□□ -0.34
ATF1-204ENST00000552487 PARP1P09874 1014 aaKnown RBP12.95□□□□□ -0.34
ATF1-204ENST00000552487 SHHQ15465 462 aa12.95□□□□□ -0.34
ATF1-204ENST00000552487 IFIT1BQ5T764 474 aaKnown RBP12.95□□□□□ -0.34
ATF1-204ENST00000552487 FAM109BQ6ICB4 259 aaPredicted RBP12.95□□□□□ -0.34
ATF1-204ENST00000552487 SH3RF1Q7Z6J0 888 aa12.95□□□□□ -0.34
ATF1-204ENST00000552487 TBC1D10CQ8IV04 446 aa12.95□□□□□ -0.34
ATF1-204ENST00000552487 TRIM43Q96BQ3 446 aaPredicted RBP12.95□□□□□ -0.34
ATF1-204ENST00000552487 ZSCAN10Q96SZ4 725 aaPredicted RBP12.95□□□□□ -0.34
ATF1-204ENST00000552487 POLR3EQ9NVU0 708 aa12.95□□□□□ -0.34
ATF1-204ENST00000552487 Q9Y3F1 56 aa12.95□□□□□ -0.34
ATF1-204ENST00000552487 SUPT16HQ9Y5B9 1047 aaKnown RBP12.95□□□□□ -0.34
ATF1-204ENST00000552487 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
ATF1-204ENST00000552487 COL11A1P12107 1806 aaPredicted RBP12.95□□□□□ -0.34
ATF1-204ENST00000552487 NEDD4P46934 1319 aa12.94□□□□□ -0.34
ATF1-204ENST00000552487 SOWAHBA6NEL2 793 aa12.94□□□□□ -0.34
ATF1-204ENST00000552487 B4E1Z4 1266 aa12.94□□□□□ -0.34
ATF1-204ENST00000552487 NKRFO15226 690 aaKnown RBP eCLIP12.94□□□□□ -0.34
ATF1-204ENST00000552487 TIMP1P01033 207 aa12.94□□□□□ -0.34
ATF1-204ENST00000552487 IGHDP01880 384 aa12.94□□□□□ -0.34
ATF1-204ENST00000552487 SUPT20HL2P0C7V6 817 aa12.94□□□□□ -0.34
ATF1-204ENST00000552487 ALDH5A1P51649 535 aaPredicted RBP12.94□□□□□ -0.34
ATF1-204ENST00000552487 SMAD3P84022 425 aaKnown RBP12.94□□□□□ -0.34
ATF1-204ENST00000552487 BEX3Q00994 111 aa12.94□□□□□ -0.34
ATF1-204ENST00000552487 PSRC1Q6PGN9 363 aaPredicted RBP12.94□□□□□ -0.34
ATF1-204ENST00000552487 CXCL17Q6UXB2 119 aa12.94□□□□□ -0.34
ATF1-204ENST00000552487 DNERQ8NFT8 737 aa12.94□□□□□ -0.34
ATF1-204ENST00000552487 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
ATF1-204ENST00000552487 SCFD2Q8WU76 684 aa12.94□□□□□ -0.34
ATF1-204ENST00000552487 FAM161BQ96MY7 647 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms