RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 NFIBO00712 420 aa12.76□□□□□ -0.37
TMEM116-215ENST00000552374 CALML3P27482 149 aa12.76□□□□□ -0.37
TMEM116-215ENST00000552374 USH1GQ495M9 461 aa12.76□□□□□ -0.37
TMEM116-215ENST00000552374 NOL8Q76FK4 1167 aaKnown RBP12.76□□□□□ -0.37
TMEM116-215ENST00000552374 EEPD1Q7L9B9 569 aa12.76□□□□□ -0.37
TMEM116-215ENST00000552374 ESYT1Q9BSJ8 1104 aa12.76□□□□□ -0.37
TMEM116-215ENST00000552374 SEC23AQ15436 765 aa12.75□□□□□ -0.37
TMEM116-215ENST00000552374 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
TMEM116-215ENST00000552374 BMP2KLQ5H9B9 411 aa12.75□□□□□ -0.37
TMEM116-215ENST00000552374 SLC39A5Q6ZMH5 540 aa12.75□□□□□ -0.37
TMEM116-215ENST00000552374 STOX1Q6ZVD7 989 aa12.75□□□□□ -0.37
TMEM116-215ENST00000552374 STAG2Q8N3U4 1231 aa12.75□□□□□ -0.37
TMEM116-215ENST00000552374 CLEC4DQ8WXI8 215 aa12.75□□□□□ -0.37
TMEM116-215ENST00000552374 PCDH10Q9P2E7 1040 aa12.75□□□□□ -0.37
TMEM116-215ENST00000552374 PNMA2Q9UL42 364 aa12.75□□□□□ -0.37
TMEM116-215ENST00000552374 ATP11BQ9Y2G3 1177 aa12.75□□□□□ -0.37
TMEM116-215ENST00000552374 COL11A1P12107 1806 aaPredicted RBP12.75□□□□□ -0.37
TMEM116-215ENST00000552374 DUSP11O75319 330 aaKnown RBP12.74□□□□□ -0.37
TMEM116-215ENST00000552374 NEFLP07196 543 aa12.74□□□□□ -0.37
TMEM116-215ENST00000552374 RTP1P59025 263 aa12.74□□□□□ -0.37
TMEM116-215ENST00000552374 WTAPQ15007 396 aa12.74□□□□□ -0.37
TMEM116-215ENST00000552374 SART3Q15020 963 aaKnown RBP12.74□□□□□ -0.37
TMEM116-215ENST00000552374 CDC37Q16543 378 aaPredicted RBP12.74□□□□□ -0.37
TMEM116-215ENST00000552374 TMEM67Q5HYA8 995 aa12.74□□□□□ -0.37
TMEM116-215ENST00000552374 RNF207Q6ZRF8 634 aa12.74□□□□□ -0.37
TMEM116-215ENST00000552374 LSG1Q9H089 658 aaKnown RBP12.74□□□□□ -0.37
TMEM116-215ENST00000552374 SPC25Q9HBM1 224 aa12.74□□□□□ -0.37
TMEM116-215ENST00000552374 SENP2Q9HC62 589 aa12.74□□□□□ -0.37
TMEM116-215ENST00000552374 ANO2Q9NQ90 1003 aa12.74□□□□□ -0.37
TMEM116-215ENST00000552374 ADD3Q9UEY8 706 aaKnown RBP12.74□□□□□ -0.37
TMEM116-215ENST00000552374 DNAH12Q6ZR08 3092 aa12.74□□□□□ -0.37
TMEM116-215ENST00000552374 ZNF236Q9UL36 1845 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 KLRF2D3W0D1 207 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 C6orf222P0C671 652 aaPredicted RBP12.73□□□□□ -0.37
TMEM116-215ENST00000552374 RPS6P62753 249 aaKnown RBP12.73□□□□□ -0.37
TMEM116-215ENST00000552374 IRX5P78411 483 aaPredicted RBP12.73□□□□□ -0.37
TMEM116-215ENST00000552374 TNFAIP2Q03169 654 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 KCNA10Q16322 511 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 VTI1AQ96AJ9 217 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 KATNBL1Q9H079 304 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 JMJD4Q9H9V9 463 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 PDGFCQ9NRA1 345 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 PHF24Q9UPV7 400 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 PARP14Q460N5 1801 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 ASTN1O14525 1302 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 WDR19Q8NEZ3 1342 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 SYNRGQ9UMZ2 1314 aa12.73□□□□□ -0.37
TMEM116-215ENST00000552374 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.72□□□□□ -0.37
TMEM116-215ENST00000552374 SLC27A2O14975 620 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 ADCY6O43306 1168 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 ADAMTS4O75173 837 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 MAGEA10P43363 369 aaPredicted RBP12.72□□□□□ -0.37
TMEM116-215ENST00000552374 MDM2Q00987 491 aaPredicted RBP12.72□□□□□ -0.37
TMEM116-215ENST00000552374 QRICH1Q2TAL8 776 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 TRIM60Q495X7 471 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 GNASQ5JWF2 1037 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 CASC1Q6TDU7 716 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 SLC30A10Q6XR72 485 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 FBXO11Q86XK2 927 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 IGDCC4Q8TDY8 1250 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 TBC1D5Q92609 795 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 TSEN34Q9BSV6 310 aaKnown RBP12.72□□□□□ -0.37
TMEM116-215ENST00000552374 PRKAG2Q9UGJ0 569 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 MAD2L2Q9UI95 211 aa12.72□□□□□ -0.37
TMEM116-215ENST00000552374 ZNFX1Q9P2E3 1918 aaKnown RBP12.72□□□□□ -0.37
TMEM116-215ENST00000552374 A0A1W2PQ45 241 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-215ENST00000552374 A0A1W2PQY0 241 aa12.71□□□□□ -0.37
TMEM116-215ENST00000552374 MYADML2A6NDP7 307 aa12.71□□□□□ -0.37
TMEM116-215ENST00000552374 DYNC1LI2O43237 492 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-215ENST00000552374 ALDH5A1P51649 535 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-215ENST00000552374 ACLYP53396 1101 aa12.71□□□□□ -0.37
TMEM116-215ENST00000552374 CREB3L3Q68CJ9 461 aa12.71□□□□□ -0.37
TMEM116-215ENST00000552374 IQSEC1Q6DN90 963 aa12.71□□□□□ -0.37
TMEM116-215ENST00000552374 TAPT1Q6NXT6 567 aa12.71□□□□□ -0.37
TMEM116-215ENST00000552374 CATIPQ7Z7H3 387 aa12.71□□□□□ -0.37
TMEM116-215ENST00000552374 FBXO16Q8IX29 292 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-215ENST00000552374 KLHDC9Q8NEP7 349 aa12.71□□□□□ -0.37
TMEM116-215ENST00000552374 NUP133Q8WUM0 1156 aa12.71□□□□□ -0.37
TMEM116-215ENST00000552374 GDF15Q99988 308 aa12.71□□□□□ -0.37
TMEM116-215ENST00000552374 LBHD1Q9BQE6 289 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-215ENST00000552374 PRO3102Q9H379 93 aa12.71□□□□□ -0.37
TMEM116-215ENST00000552374 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-215ENST00000552374 MRPL11Q9Y3B7 192 aaKnown RBP12.71□□□□□ -0.37
TMEM116-215ENST00000552374 ABCB11O95342 1321 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 PALM3A6NDB9 673 aaPredicted RBP12.71□□□□□ -0.38
TMEM116-215ENST00000552374 PRC1O43663 620 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 SMPD1P17405 629 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 PTGS1P23219 599 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 FXR1P51114 621 aaKnown RBP eCLIP12.71□□□□□ -0.38
TMEM116-215ENST00000552374 GJA9P57773 515 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 ANTXR2P58335 489 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 BEX3Q00994 111 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 PDE4DQ08499 809 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 NECTIN1Q15223 517 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 NFXL1Q6ZNB6 911 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 HOMER1Q86YM7 354 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 MCF2L2Q86YR7 1114 aa12.71□□□□□ -0.38
TMEM116-215ENST00000552374 MB21D2Q8IYB1 491 aaPredicted RBP12.71□□□□□ -0.38
TMEM116-215ENST00000552374 PCSK9Q8NBP7 692 aaKnown RBP12.71□□□□□ -0.38
TMEM116-215ENST00000552374 RGS22Q8NE09 1264 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms