RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 DPP9Q86TI2 863 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 FBXO11Q86XK2 927 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 ABRAQ8N0Z2 381 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 SOCS4Q8WXH5 440 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 CLEC4DQ8WXI8 215 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 SPZ1Q9BXG8 430 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 ACAD9Q9H845 621 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 NFIBO00712 420 aa17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 GRK4P32298 578 aa17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 METAP2P50579 478 aaKnown RBP eCLIP17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 FUT2Q10981 343 aa17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 ANKRD35Q8N283 1001 aa17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 TBC1D5Q92609 795 aa17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 DDX11Q96FC9 970 aa17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 UPF2Q9HAU5 1272 aaKnown RBP17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 NCOA5Q9HCD5 579 aaKnown RBP17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 RBM28Q9NW13 759 aaKnown RBP17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 FLRT1Q9NZU1 646 aa17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 FBXO40Q9UH90 709 aa17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 TPCN1Q9ULQ1 816 aa17.59■□□□□ 0.41
SMARCD1-211ENST00000551497 PNMA6FA0A0J9YX94 578 aa17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 MYCP01106 439 aaPredicted RBP17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 XRCC5P13010 732 aaKnown RBP17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 RCAN1P53805 252 aa17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 TRIM32Q13049 653 aa17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 STK3Q13188 491 aa17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 SLC9C1Q4G0N8 1177 aa17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 NSMFQ6X4W1 530 aa17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 NOL8Q76FK4 1167 aaKnown RBP17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 TRIB2Q92519 343 aa17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 RRP36Q96EU6 259 aaKnown RBP17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 ZNF274Q96GC6 653 aaPredicted RBP17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 TBC1D32Q96NH3 1257 aa17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 PURBQ96QR8 312 aaKnown RBP17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 AMNQ9BXJ7 453 aa17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 A1CFQ9NQ94 594 aaKnown RBP17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 PCDHA1Q9Y5I3 950 aa17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 V9GY48 417 aaPredicted RBP17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 MYH6P13533 1939 aa17.58■□□□□ 0.4
SMARCD1-211ENST00000551497 DNAJC25-GNG10A0A024R161 153 aa17.57■□□□□ 0.4
SMARCD1-211ENST00000551497 CCDC85CA6NKD9 419 aa17.57■□□□□ 0.4
SMARCD1-211ENST00000551497 PPFIA3O75145 1194 aa17.57■□□□□ 0.4
SMARCD1-211ENST00000551497 HOXC6P09630 235 aa17.57■□□□□ 0.4
SMARCD1-211ENST00000551497 CNTN2Q02246 1040 aa17.57■□□□□ 0.4
SMARCD1-211ENST00000551497 BAATQ14032 418 aaPredicted RBP17.57■□□□□ 0.4
SMARCD1-211ENST00000551497 ZNF792Q3KQV3 632 aa17.57■□□□□ 0.4
SMARCD1-211ENST00000551497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.57■□□□□ 0.4
SMARCD1-211ENST00000551497 PXYLP1Q8TE99 480 aa17.57■□□□□ 0.4
SMARCD1-211ENST00000551497 APBA2Q99767 749 aa17.57■□□□□ 0.4
SMARCD1-211ENST00000551497 BIN2Q9UBW5 565 aaPredicted RBP17.57■□□□□ 0.4
SMARCD1-211ENST00000551497 PNMA2Q9UL42 364 aa17.57■□□□□ 0.4
SMARCD1-211ENST00000551497 ABCB11O95342 1321 aa17.56■□□□□ 0.4
SMARCD1-211ENST00000551497 DTNBO60941 627 aa17.56■□□□□ 0.4
SMARCD1-211ENST00000551497 PPP2R5BQ15173 497 aa17.56■□□□□ 0.4
SMARCD1-211ENST00000551497 SLAIN1Q8ND83 568 aa17.56■□□□□ 0.4
SMARCD1-211ENST00000551497 CYP39A1Q9NYL5 469 aa17.56■□□□□ 0.4
SMARCD1-211ENST00000551497 CNTNAP5Q8WYK1 1306 aa17.55■□□□□ 0.4
SMARCD1-211ENST00000551497 CCDC196A0A1B0GTZ2 297 aa17.55■□□□□ 0.4
SMARCD1-211ENST00000551497 OPLAHO14841 1288 aa17.55■□□□□ 0.4
SMARCD1-211ENST00000551497 ANKRD1Q15327 319 aa17.55■□□□□ 0.4
SMARCD1-211ENST00000551497 NTRK3Q16288 839 aa17.55■□□□□ 0.4
SMARCD1-211ENST00000551497 ARMC5Q96C12 935 aa17.55■□□□□ 0.4
SMARCD1-211ENST00000551497 MAML3Q96JK9 1138 aa17.55■□□□□ 0.4
SMARCD1-211ENST00000551497 FGD4Q96M96 766 aa17.55■□□□□ 0.4
SMARCD1-211ENST00000551497 MRPL11Q9Y3B7 192 aaKnown RBP17.55■□□□□ 0.4
SMARCD1-211ENST00000551497 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 SOWAHBA6NEL2 793 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 POTEB2H3BUK9 544 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 LARGE1O95461 756 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 IGHA2P01877 340 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 INHAP05111 366 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 CALML3P27482 149 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 CYP2C19P33261 490 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 MTFR1Q15390 333 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 ME3Q16798 604 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 SLC30A10Q6XR72 485 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 RNF207Q6ZRF8 634 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 NECAB1Q8N987 351 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 FAM133AQ8N9E0 248 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 PHKBQ93100 1093 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 ZNF333Q96JL9 665 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 SLC5A4Q9NY91 659 aa17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 SEC63Q9UGP8 760 aaKnown RBP17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 DDX49Q9Y6V7 483 aaKnown RBP17.54■□□□□ 0.4
SMARCD1-211ENST00000551497 NID2Q14112 1375 aa17.53■□□□□ 0.4
SMARCD1-211ENST00000551497 PFKFB2O60825 505 aa17.53■□□□□ 0.4
SMARCD1-211ENST00000551497 HMGCRP04035 888 aa17.53■□□□□ 0.4
SMARCD1-211ENST00000551497 RPS6P62753 249 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-211ENST00000551497 SCRN1Q12765 414 aa17.53■□□□□ 0.4
SMARCD1-211ENST00000551497 PRAMEF19Q5SWL8 479 aa17.53■□□□□ 0.4
SMARCD1-211ENST00000551497 RGS22Q8NE09 1264 aa17.53■□□□□ 0.4
SMARCD1-211ENST00000551497 GPKOWQ92917 476 aaPredicted RBP eCLIP17.53■□□□□ 0.4
SMARCD1-211ENST00000551497 SLKQ9H2G2 1235 aaPredicted RBP17.53■□□□□ 0.4
SMARCD1-211ENST00000551497 DIS3Q9Y2L1 958 aaKnown RBP17.53■□□□□ 0.4
SMARCD1-211ENST00000551497 ASTN1O14525 1302 aa17.52■□□□□ 0.4
SMARCD1-211ENST00000551497 PFASO15067 1338 aa17.52■□□□□ 0.4
SMARCD1-211ENST00000551497 CACNB2Q08289 660 aaPredicted RBP17.52■□□□□ 0.4
SMARCD1-211ENST00000551497 RABEP1Q15276 862 aa17.52■□□□□ 0.4
SMARCD1-211ENST00000551497 OLFML2BQ68BL8 750 aa17.52■□□□□ 0.4
SMARCD1-211ENST00000551497 TRMT44Q8IYL2 757 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms