RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 UBE2SQ16763 222 aa13.03□□□□□ -0.32
RAB5C-208ENST00000551338 TRMT44Q8IYL2 757 aaKnown RBP13.03□□□□□ -0.32
RAB5C-208ENST00000551338 ENOX1Q8TC92 643 aaKnown RBP13.03□□□□□ -0.32
RAB5C-208ENST00000551338 GMCL1Q96IK5 515 aa13.03□□□□□ -0.32
RAB5C-208ENST00000551338 GSDMAQ96QA5 445 aa13.03□□□□□ -0.32
RAB5C-208ENST00000551338 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.03□□□□□ -0.32
RAB5C-208ENST00000551338 SPTLC3Q9NUV7 552 aa13.03□□□□□ -0.32
RAB5C-208ENST00000551338 FANCLQ9NW38 375 aa13.03□□□□□ -0.32
RAB5C-208ENST00000551338 ATF5Q9Y2D1 282 aaPredicted RBP13.03□□□□□ -0.32
RAB5C-208ENST00000551338 A0A1W2PRG0 241 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 F5H6K3 240 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 TDP2O95551 362 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 ZNF18P17022 549 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 ERCC5P28715 1186 aaPredicted RBP13.02□□□□□ -0.33
RAB5C-208ENST00000551338 STAT6P42226 847 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 KLRC3Q07444 240 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 NOLC1Q14978 699 aaKnown RBP eCLIP13.02□□□□□ -0.33
RAB5C-208ENST00000551338 CT47A1Q5JQC4 288 aaPredicted RBP13.02□□□□□ -0.33
RAB5C-208ENST00000551338 FKBP1CQ5VVH2 108 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 TMC6Q7Z403 805 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 CUL5Q93034 780 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 AK8Q96MA6 479 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 NUP88Q99567 741 aaPredicted RBP13.02□□□□□ -0.33
RAB5C-208ENST00000551338 MTFR1LQ9H019 292 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 BLZF1Q9H2G9 400 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 IMPACTQ9P2X3 320 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 SYNPO2Q9UMS6 1093 aa13.02□□□□□ -0.33
RAB5C-208ENST00000551338 PPP1R3GB7ZBB8 358 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 NFKBIEO00221 500 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 CBFA2T2O43439 604 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 SLC37A4O43826 429 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 TNNI2P48788 182 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 CCZ1BP86790 482 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 CCZ1P86791 482 aaPredicted RBP13.01□□□□□ -0.33
RAB5C-208ENST00000551338 DALRD3Q5D0E6 543 aaKnown RBP13.01□□□□□ -0.33
RAB5C-208ENST00000551338 SYDE2Q5VT97 1194 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 RRAGBQ5VZM2 374 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 CIAPIN1Q6FI81 312 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 BTNL9Q6UXG8 535 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 CABP7Q86V35 215 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 LRRC8AQ8IWT6 810 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 CDAN1Q8IWY9 1227 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 OGFOD1Q8N543 542 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 MTMR9Q96QG7 549 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 MMTAG2Q9BU76 263 aaKnown RBP13.01□□□□□ -0.33
RAB5C-208ENST00000551338 TAOK3Q9H2K8 898 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 VEZTQ9HBM0 779 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 ZBTB21Q9ULJ3 1066 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 NFE2L3Q9Y4A8 694 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 SYNRGQ9UMZ2 1314 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 SBF1O95248 1867 aa13.01□□□□□ -0.33
RAB5C-208ENST00000551338 PHIPQ8WWQ0 1821 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 SHTN1A0MZ66 631 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 KLRC4O43908 158 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 RAD21O60216 631 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 BMP3P12645 472 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 PLCG1P19174 1290 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 POLD1P28340 1107 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 UBA7P41226 1012 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 GSDMDP57764 484 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 CALCRLQ16602 461 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 FILIP1Q7Z7B0 1213 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 FAM83AQ86UY5 434 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 CCDC125Q86Z20 511 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 SMYD4Q8IYR2 804 aaPredicted RBP13□□□□□ -0.33
RAB5C-208ENST00000551338 IGSF22Q8N9C0 903 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 ANO3Q9BYT9 981 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 INTS13Q9NVM9 706 aa13□□□□□ -0.33
RAB5C-208ENST00000551338 TMEM232C9JQI7 657 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 TBC1D12O60347 775 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 RPN1P04843 607 aaKnown RBP12.99□□□□□ -0.33
RAB5C-208ENST00000551338 ECE1P42892 770 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 MMP14P50281 582 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 FXR2P51116 673 aaKnown RBP eCLIP12.99□□□□□ -0.33
RAB5C-208ENST00000551338 MRPL12P52815 198 aaKnown RBP12.99□□□□□ -0.33
RAB5C-208ENST00000551338 UBASH3AP57075 661 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 KIAA1755Q5JYT7 1200 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 PPP4R3AQ6IN85 833 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 NAP1L5Q96NT1 182 aaPredicted RBP12.99□□□□□ -0.33
RAB5C-208ENST00000551338 PLIN2Q99541 437 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 SGIP1Q9BQI5 828 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 TMEM39BQ9GZU3 492 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 GLT8D2Q9H1C3 349 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 CUEDC2Q9H467 287 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 MAGEF1Q9HAY2 307 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 ARHGEF10LQ9HCE6 1279 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 SAMSN1Q9NSI8 373 aaKnown RBP12.99□□□□□ -0.33
RAB5C-208ENST00000551338 KBTBD4Q9NVX7 518 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 CTNND2Q9UQB3 1225 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 PCDHA1Q9Y5I3 950 aa12.99□□□□□ -0.33
RAB5C-208ENST00000551338 LTBP3Q9NS15 1303 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 WNT10BO00744 389 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 SERPINC1P01008 464 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 TAL1P17542 331 aaPredicted RBP12.98□□□□□ -0.33
RAB5C-208ENST00000551338 TECP42680 631 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 STX17P56962 302 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 SNAP25P60880 206 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 GRB10Q13322 594 aa12.98□□□□□ -0.33
RAB5C-208ENST00000551338 KCNB1Q14721 858 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms