RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.19□□□□□ -0.3
PFDN5-212ENST00000550880 TMEM232C9JQI7 657 aa13.19□□□□□ -0.3
PFDN5-212ENST00000550880 CHGBP05060 677 aa13.19□□□□□ -0.3
PFDN5-212ENST00000550880 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
PFDN5-212ENST00000550880 ACTN1P12814 892 aa13.19□□□□□ -0.3
PFDN5-212ENST00000550880 GNAT2P19087 354 aa13.19□□□□□ -0.3
PFDN5-212ENST00000550880 TMEM67Q5HYA8 995 aa13.19□□□□□ -0.3
PFDN5-212ENST00000550880 PPP4R3BQ5MIZ7 849 aa13.19□□□□□ -0.3
PFDN5-212ENST00000550880 LRRC47Q8N1G4 583 aaKnown RBP13.19□□□□□ -0.3
PFDN5-212ENST00000550880 CEP95Q96GE4 821 aa13.19□□□□□ -0.3
PFDN5-212ENST00000550880 TRERF1Q96PN7 1200 aa13.19□□□□□ -0.3
PFDN5-212ENST00000550880 TRPV6Q9H1D0 765 aa13.19□□□□□ -0.3
PFDN5-212ENST00000550880 RNF146Q9NTX7 359 aa13.19□□□□□ -0.3
PFDN5-212ENST00000550880 MYO9BQ13459 2157 aa13.19□□□□□ -0.3
PFDN5-212ENST00000550880 UMODL1Q5DID0 1318 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 IGKV6D-41A0A0C4DH26 115 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 GSG1L2A8MUP6 293 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 ERC2O15083 957 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 B4GALT4O60513 344 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 TSPY3P0CV98 308 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 TSPY8P0CW00 308 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 BMP1P13497 986 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 SMPD1P17405 629 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 HNRNPUQ00839 825 aaKnown RBP eCLIP13.18□□□□□ -0.3
PFDN5-212ENST00000550880 PDE4BQ07343 736 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 LRRFIP1Q32MZ4 808 aaKnown RBP13.18□□□□□ -0.3
PFDN5-212ENST00000550880 NACAP1Q9BZK3 213 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 LRRCC1Q9C099 1032 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 A1CFQ9NQ94 594 aaKnown RBP13.18□□□□□ -0.3
PFDN5-212ENST00000550880 GPHNQ9NQX3 736 aaPredicted RBP13.18□□□□□ -0.3
PFDN5-212ENST00000550880 COG5Q9UP83 839 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 HCN4Q9Y3Q4 1203 aa13.18□□□□□ -0.3
PFDN5-212ENST00000550880 ASTN1O14525 1302 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 SOWAHBA6NEL2 793 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 KIF28PB7ZC32 967 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 PRDM1O75626 825 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 ZFYP08048 801 aaPredicted RBP13.17□□□□□ -0.3
PFDN5-212ENST00000550880 ALAS1P13196 640 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 MYOGP15173 224 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 SLC1A4P43007 532 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 TFF2Q03403 129 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 KIAA1211Q6ZU35 1233 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 EEPD1Q7L9B9 569 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 STAG1Q8WVM7 1258 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 APPBP2Q92624 585 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 SCLYQ96I15 445 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 GPATCH3Q96I76 525 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 NECAB3Q96P71 396 aaPredicted RBP13.17□□□□□ -0.3
PFDN5-212ENST00000550880 WNT8AQ9H1J5 351 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 ALDH8A1Q9H2A2 487 aaPredicted RBP13.17□□□□□ -0.3
PFDN5-212ENST00000550880 VTA1Q9NP79 307 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 POLR3EQ9NVU0 708 aa13.17□□□□□ -0.3
PFDN5-212ENST00000550880 GRIN2DO15399 1336 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 RFC2P35250 354 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 CPT1AP50416 773 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 PSMC6P62333 389 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 BRDTQ58F21 947 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-212ENST00000550880 DEFB128Q7Z7B8 93 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 SIRT2Q8IXJ6 389 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 KBTBD3Q8NAB2 608 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 RETREG2Q8NC44 543 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 NEDD1Q8NHV4 660 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 PHOSPHO2Q8TCD6 241 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 GMCL1Q96IK5 515 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 ECHDC1Q9NTX5 307 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 ZBTB40Q9NUA8 1239 aa13.16□□□□□ -0.3
PFDN5-212ENST00000550880 ADD3Q9UEY8 706 aaKnown RBP13.16□□□□□ -0.3
PFDN5-212ENST00000550880 ARIH1Q9Y4X5 557 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-212ENST00000550880 PATL2C9JE40 543 aaKnown RBP13.15□□□□□ -0.3
PFDN5-212ENST00000550880 RNF113AO15541 343 aaKnown RBP13.15□□□□□ -0.3
PFDN5-212ENST00000550880 GPAA1O43292 621 aa13.15□□□□□ -0.3
PFDN5-212ENST00000550880 PLA2G6O60733 806 aa13.15□□□□□ -0.3
PFDN5-212ENST00000550880 CA3P07451 260 aa13.15□□□□□ -0.3
PFDN5-212ENST00000550880 POU3F3P20264 500 aaPredicted RBP13.15□□□□□ -0.3
PFDN5-212ENST00000550880 TAPT1Q6NXT6 567 aa13.15□□□□□ -0.3
PFDN5-212ENST00000550880 FBXO16Q8IX29 292 aaPredicted RBP13.15□□□□□ -0.3
PFDN5-212ENST00000550880 OSBP2Q969R2 916 aa13.15□□□□□ -0.3
PFDN5-212ENST00000550880 SLC9A7Q96T83 725 aa13.15□□□□□ -0.3
PFDN5-212ENST00000550880 PDGFCQ9NRA1 345 aa13.15□□□□□ -0.3
PFDN5-212ENST00000550880 CYP39A1Q9NYL5 469 aa13.15□□□□□ -0.3
PFDN5-212ENST00000550880 MTCH2Q9Y6C9 303 aa13.15□□□□□ -0.3
PFDN5-212ENST00000550880 TNKSO95271 1327 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 GREB1LQ9C091 1923 aaPredicted RBP13.14□□□□□ -0.31
PFDN5-212ENST00000550880 MYL3P08590 195 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 MCCP23508 829 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 KCNQ1P51787 676 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 TFAP4Q01664 338 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 TTLL4Q14679 1199 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 DUSP28Q4G0W2 176 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 FAM47CQ5HY64 1035 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 NSMFQ6X4W1 530 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 MPHOSPH6Q99547 160 aaKnown RBP13.14□□□□□ -0.31
PFDN5-212ENST00000550880 FTOQ9C0B1 505 aaKnown RBP eCLIP13.14□□□□□ -0.31
PFDN5-212ENST00000550880 CERS4Q9HA82 394 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 TRMT13Q9NUP7 481 aaKnown RBP13.14□□□□□ -0.31
PFDN5-212ENST00000550880 CCPG1Q9ULG6 757 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 NCOR1O75376 2440 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 MCM3APO60318 1980 aa13.14□□□□□ -0.31
PFDN5-212ENST00000550880 ZNF536O15090 1300 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms