RNA–Protein interactions for RNA: ENST00000550767.5

TUBA1A-207, Transcript of tubulin alpha 1a, humanhuman

TSL 1 (best) BASIC

Gene TUBA1A, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-207ENST00000550767 PDRG1Q9NUG6 133 aa13.9□□□□□ -0.18
TUBA1A-207ENST00000550767 RBM28Q9NW13 759 aaKnown RBP13.9□□□□□ -0.18
TUBA1A-207ENST00000550767 GOLGA8AA7E2F4 631 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 XRCC5P13010 732 aaKnown RBP13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 ELNP15502 786 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 TAL1P17542 331 aaPredicted RBP13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 CAPN2P17655 700 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 RTN1Q16799 776 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 QRICH1Q2TAL8 776 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 USH1GQ495M9 461 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 DPP9Q86TI2 863 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 FBXO11Q86XK2 927 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 HOMER1Q86YM7 354 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 SHISA4Q96DD7 197 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 SPZ1Q9BXG8 430 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 C22orf23Q9BZE7 217 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 SLC5A4Q9NY91 659 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 CEP290O15078 2479 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 LCTP09848 1927 aa13.89□□□□□ -0.19
TUBA1A-207ENST00000550767 ZBTB5O15062 677 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 CYTH3O43739 400 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 PLEKHA8P1O95397 391 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 INHAP05111 366 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 HOXC6P09630 235 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 SMARCA1P28370 1054 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 METAP2P50579 478 aaKnown RBP eCLIP13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 TOB2Q14106 344 aaPredicted RBP13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 SLC35G1Q2M3R5 365 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 TMTC3Q6ZXV5 915 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 TRMT44Q8IYL2 757 aaKnown RBP13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 ANKRD35Q8N283 1001 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 U2AF1L4Q8WU68 220 aaKnown RBP13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 MTMR8Q96EF0 704 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 DDX11Q96FC9 970 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 UNC93B1Q9H1C4 597 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 NID2Q14112 1375 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 MCM3APO60318 1980 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 PFASO15067 1338 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 ABCB11O95342 1321 aa13.88□□□□□ -0.19
TUBA1A-207ENST00000550767 CCDC196A0A1B0GTZ2 297 aa13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 COBLO75128 1261 aa13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 SGPL1O95470 568 aa13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 HMGCRP04035 888 aa13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 EVCP57679 992 aa13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 PPP2R5BQ15173 497 aa13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 MUM1L1Q5H9M0 696 aa13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 SRBD1Q8N5C6 995 aaKnown RBP13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 NPLOC4Q8TAT6 608 aa13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 TRIB2Q92519 343 aa13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 RRP36Q96EU6 259 aaKnown RBP13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 PIGSQ96S52 555 aa13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 AMNQ9BXJ7 453 aa13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 A1CFQ9NQ94 594 aaKnown RBP13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 PCDH10Q9P2E7 1040 aa13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 SEC63Q9UGP8 760 aaKnown RBP13.87□□□□□ -0.19
TUBA1A-207ENST00000550767 PNMA6FA0A0J9YX94 578 aa13.86□□□□□ -0.19
TUBA1A-207ENST00000550767 PGK2P07205 417 aa13.86□□□□□ -0.19
TUBA1A-207ENST00000550767 RBM25P49756 843 aaKnown RBP13.86□□□□□ -0.19
TUBA1A-207ENST00000550767 TRAF1Q13077 416 aa13.86□□□□□ -0.19
TUBA1A-207ENST00000550767 ANKRD1Q15327 319 aa13.86□□□□□ -0.19
TUBA1A-207ENST00000550767 CCL14Q16627 93 aa13.86□□□□□ -0.19
TUBA1A-207ENST00000550767 NSMFQ6X4W1 530 aa13.86□□□□□ -0.19
TUBA1A-207ENST00000550767 UBE2Q1Q7Z7E8 422 aa13.86□□□□□ -0.19
TUBA1A-207ENST00000550767 CMTR1Q8N1G2 835 aaKnown RBP13.86□□□□□ -0.19
TUBA1A-207ENST00000550767 PIBF1Q8WXW3 757 aa13.86□□□□□ -0.19
TUBA1A-207ENST00000550767 CNTNAP5Q8WYK1 1306 aa13.86□□□□□ -0.19
TUBA1A-207ENST00000550767 DNAJC25-GNG10A0A024R161 153 aa13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 NFIBO00712 420 aa13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 CDC27P30260 824 aa13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 NEK4P51957 841 aa13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 ZNF792Q3KQV3 632 aa13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 CCDC82Q8N4S0 544 aa13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 CLEC4DQ8WXI8 215 aa13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 MAML3Q96JK9 1138 aa13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 BACH2Q9BYV9 841 aa13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 ALDH8A1Q9H2A2 487 aaPredicted RBP13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 PAK6Q9NQU5 681 aaPredicted RBP13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 DIS3Q9Y2L1 958 aaKnown RBP13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 MRPL11Q9Y3B7 192 aaKnown RBP13.85□□□□□ -0.19
TUBA1A-207ENST00000550767 PTPDC1A2A3K4 754 aa13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 POTEB2H3BUK9 544 aa13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 PPP1R11O60927 126 aaPredicted RBP13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 PDIA3P30101 505 aaKnown RBP13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 AK2P54819 239 aa13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 MFSD14CQ5VZR4 134 aa13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 OLFML2BQ68BL8 750 aa13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 RNF207Q6ZRF8 634 aa13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 ZNF274Q96GC6 653 aaPredicted RBP13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 DEFB118Q96PH6 123 aa13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 LARP6Q9BRS8 491 aaKnown RBP13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 FAM217BQ9NTX9 383 aaPredicted RBP13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 CYP39A1Q9NYL5 469 aa13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 FLRT1Q9NZU1 646 aa13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 PCDHA1Q9Y5I3 950 aa13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 RPTORQ8N122 1335 aa13.84□□□□□ -0.19
TUBA1A-207ENST00000550767 TFRCP02786 760 aaKnown RBP13.83□□□□□ -0.19
TUBA1A-207ENST00000550767 ADD1P35611 737 aaKnown RBP13.83□□□□□ -0.19
TUBA1A-207ENST00000550767 CCT2P78371 535 aaKnown RBP13.83□□□□□ -0.19
TUBA1A-207ENST00000550767 HABP4Q5JVS0 413 aaKnown RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms