RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 IFNL3Q8IZI9 196 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 C17orf53Q8N3J3 647 aaPredicted RBP13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 STAMQ92783 540 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 FAM193BQ96PV7 902 aaPredicted RBP13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 FAM47CQ5HY64 1035 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 SPATS2Q86XZ4 545 aaKnown RBP13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 LMBRD1Q9NUN5 540 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 HYOU1Q9Y4L1 999 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 ATF2P15336 505 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 POLR2BP30876 1174 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 LRRC47Q8N1G4 583 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 SDR42E1Q8WUS8 393 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 LONP1P36776 959 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 SCYL2Q6P3W7 929 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 GPIHBP1Q8IV16 184 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 ANKRD35Q8N283 1001 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 FLAD1Q8NFF5 587 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 KLRF2D3W0D1 207 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 RBM6P78332 1123 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 NME8Q8N427 588 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 SKA2Q8WVK7 121 aaPredicted RBP13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 Q9H521 79 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 USP17L12C9JPN9 530 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 USP17L21D6R901 530 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 METTL14Q9HCE5 456 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 FAM173BQ6P4H8 233 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 TSC1Q92574 1164 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 SDCCAG3Q96C92 435 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 HESX1Q9UBX0 185 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 ARHGAP42A6NI28 874 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 ICA1Q05084 483 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 FBXO11Q86XK2 927 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 DISC1Q9NRI5 854 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 SERTAD1Q9UHV2 236 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 TMEM191BP0C7N4 346 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 ABCD1P33897 745 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 CMTR1Q8N1G2 835 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 CARMIL3Q8ND23 1372 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 TRPM1Q7Z4N2 1603 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 LMNB2Q03252 620 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 DBN1Q16643 649 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 CCPG1Q9ULG6 757 aa13.67□□□□□ -0.22
RAB3IP-212ENST00000550536 LRRIQ4A6NIV6 560 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 ALAS1P13196 640 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 RBBP5Q15291 538 aaKnown RBP13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 ABCC4O15439 1325 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 PDE6AP16499 860 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 EIF4A1P60842 406 aaKnown RBP13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 FANCBQ8NB91 859 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 RNF169Q8NCN4 708 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 GPKOWQ92917 476 aaPredicted RBP eCLIP13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 PPARDQ03181 441 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 BBOF1Q8ND07 529 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 RABEP2Q9H5N1 569 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 ANAPC5Q9UJX4 755 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 A0A0D9SFI3 127 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 CLGNO14967 610 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 SRGAP2BP0DMP2 458 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 GARSP41250 739 aaKnown RBP13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 HSPA2P54652 639 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 PFKFB2O60825 505 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 MYL7Q01449 175 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 GTPBP6O43824 516 aaPredicted RBP13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 IGSF3O75054 1194 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 UBE2Q2Q8WVN8 375 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 PPM1KQ8N3J5 372 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 CCDC24Q8N4L8 307 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 ANKRD42Q8N9B4 389 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 DCPSQ96C86 337 aaKnown RBP13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 ZNF496Q96IT1 587 aaPredicted RBP13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 CUEDC2Q9H467 287 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 SAMD9LQ8IVG5 1584 aa13.66□□□□□ -0.22
RAB3IP-212ENST00000550536 STMN1P16949 149 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 ECE1P42892 770 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 SYMPKQ92797 1274 aaKnown RBP13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 MED4Q9NPJ6 270 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 BUB1O43683 1085 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 APBA3O96018 575 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 HSPD1P10809 573 aaKnown RBP13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 NSFP46459 744 aaKnown RBP13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 RPS6KC1Q96S38 1066 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 ORAI2Q96SN7 254 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 ABCB5Q2M3G0 1257 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 KAZNQ674X7 775 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 SORBS3O60504 671 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 S100BP04271 92 aaPredicted RBP13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 PTGDRQ13258 359 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 POLA2Q14181 598 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 AOC3Q16853 763 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 LRCH2Q5VUJ6 765 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 CDKL2Q92772 493 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 GBP5Q96PP8 586 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 BAG5Q9UL15 447 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 ABCC12Q96J65 1359 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 BCAMP50895 628 aa13.65□□□□□ -0.22
RAB3IP-212ENST00000550536 TTBK2Q6IQ55 1244 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms