RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 FTCDO95954 541 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 GCP02774 474 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 NLRP5P59047 1200 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 DDR1Q08345 913 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 TPX2Q9ULW0 747 aaKnown RBP13.44□□□□□ -0.26
VDR-208ENST00000550325 PCDHA13Q9Y5I0 950 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 GTPBP6O43824 516 aaPredicted RBP13.44□□□□□ -0.26
VDR-208ENST00000550325 PDE6AP16499 860 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 EIF4A3P38919 411 aaKnown RBP13.44□□□□□ -0.26
VDR-208ENST00000550325 IFNL3Q8IZI9 196 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 KCNH5Q8NCM2 988 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 FERMT2Q96AC1 680 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 DNAJC7Q99615 494 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 N4BP2Q86UW6 1770 aaPredicted RBP13.44□□□□□ -0.26
VDR-208ENST00000550325 H7C1W4 665 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 DNM2P50570 870 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 ATP6V1G3Q96LB4 118 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 TSGA10Q9BZW7 698 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 GCOM1H8Y6P7 765 aaPredicted RBP13.43□□□□□ -0.26
VDR-208ENST00000550325 MYZAPP0CAP1 466 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 TCP1P17987 556 aaKnown RBP13.43□□□□□ -0.26
VDR-208ENST00000550325 CALRP27797 417 aaKnown RBP13.43□□□□□ -0.26
VDR-208ENST00000550325 AKNAD1Q5T1N1 836 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 KDM7AQ6ZMT4 941 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 RRAGAQ7L523 313 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 FMNL3Q8IVF7 1028 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 RSRC1Q96IZ7 334 aaKnown RBP13.43□□□□□ -0.26
VDR-208ENST00000550325 AXIN2Q9Y2T1 843 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 BAZ2BQ9UIF8 2168 aaKnown RBP13.43□□□□□ -0.26
VDR-208ENST00000550325 SMIM23A6NLE4 172 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 PP2D1A8MPX8 630 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 FECHP22830 423 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 CASP7P55210 303 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 MYO1EQ12965 1108 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 CFAP221Q4G0U5 840 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 CACNA2D4Q7Z3S7 1137 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 CACNA2D3Q8IZS8 1091 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 TACO1Q9BSH4 297 aaKnown RBP13.43□□□□□ -0.26
VDR-208ENST00000550325 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.43□□□□□ -0.26
VDR-208ENST00000550325 SLIT1O75093 1534 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 PHF20L1A8MW92 1017 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 HGSO14964 777 aaPredicted RBP13.43□□□□□ -0.26
VDR-208ENST00000550325 FAM107AO95990 144 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 SPRED3Q2MJR0 410 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 SGMS1Q86VZ5 419 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 STAG1Q8WVM7 1258 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 CARD10Q9BWT7 1032 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 KRT23Q9C075 422 aa13.43□□□□□ -0.26
VDR-208ENST00000550325 CTNNA1P35221 906 aaKnown RBP13.42□□□□□ -0.26
VDR-208ENST00000550325 KIF11P52732 1056 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 FUKQ8N0W3 1084 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 SYNE4Q8N205 404 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 LRRC10BA6NIK2 292 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 LIFRP42702 1097 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 ZBED6P86452 979 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 SH3RF1Q7Z6J0 888 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 IRF2BP1Q8IU81 584 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 WDR19Q8NEZ3 1342 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 CNOT6LQ96LI5 555 aaKnown RBP13.42□□□□□ -0.26
VDR-208ENST00000550325 GMNCA6NCL1 334 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 PLEKHA8P1O95397 391 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 QPCTQ16769 361 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 MICAL1Q8TDZ2 1067 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 PLCD4Q9BRC7 762 aa13.42□□□□□ -0.26
VDR-208ENST00000550325 IQSEC3Q9UPP2 1182 aaPredicted RBP13.42□□□□□ -0.26
VDR-208ENST00000550325 STK36Q9NRP7 1315 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 CCDC189A1A4V9 331 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 SNAP23O00161 211 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 DNM1LO00429 736 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 PPP1R12AO14974 1030 aaPredicted RBP13.41□□□□□ -0.26
VDR-208ENST00000550325 ZNF263O14978 683 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 PHKA1P46020 1223 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 EHHADHQ08426 723 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 ACCSLQ4AC99 568 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 MTRQ99707 1265 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 NACAP1Q9BZK3 213 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 NLRC4Q9NPP4 1024 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 UBA7P41226 1012 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 GFPT1Q06210 699 aaPredicted RBP13.41□□□□□ -0.26
VDR-208ENST00000550325 IFFO1Q0D2I5 559 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 SLC4A8Q2Y0W8 1093 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 DDX42Q86XP3 938 aaKnown RBP eCLIP13.41□□□□□ -0.26
VDR-208ENST00000550325 ARFGAP2Q8N6H7 521 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 SPDL1Q96EA4 605 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 SGSM3Q96HU1 749 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 NOVA2Q9UNW9 492 aaKnown RBP13.41□□□□□ -0.26
VDR-208ENST00000550325 NRXN3Q9Y4C0 1643 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 CCDC170Q8IYT3 715 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 TRIM31Q9BZY9 425 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 CNNM2Q9H8M5 875 aa13.41□□□□□ -0.26
VDR-208ENST00000550325 ADAMTS13Q76LX8 1427 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 ENO4A6NNW6 628 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 RASSF9O75901 435 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 EPB41P11171 864 aaKnown RBP13.4□□□□□ -0.26
VDR-208ENST00000550325 HPS3Q969F9 1004 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 HVCN1Q96D96 273 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 STRBPQ96SI9 672 aaKnown RBP13.4□□□□□ -0.26
VDR-208ENST00000550325 SH2D4AQ9H788 454 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 A1CFQ9NQ94 594 aaKnown RBP13.4□□□□□ -0.26
VDR-208ENST00000550325 TLDC2A0PJX2 215 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms