RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 JMJD4Q9H9V9 463 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-229ENST00000549883 MAD2L2Q9UI95 211 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 MYADML2A6NDP7 307 aa11.44□□□□□ -0.58
HDAC7-229ENST00000549883 PPP1R11O60927 126 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-229ENST00000549883 CDC45O75419 566 aa11.44□□□□□ -0.58
HDAC7-229ENST00000549883 NEFLP07196 543 aa11.44□□□□□ -0.58
HDAC7-229ENST00000549883 PARP1P09874 1014 aaKnown RBP11.44□□□□□ -0.58
HDAC7-229ENST00000549883 LRRC41Q15345 812 aa11.44□□□□□ -0.58
HDAC7-229ENST00000549883 CDC37Q16543 378 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-229ENST00000549883 GPATCH4Q5T3I0 446 aaKnown RBP11.44□□□□□ -0.58
HDAC7-229ENST00000549883 ZNF467Q7Z7K2 595 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-229ENST00000549883 RALYLQ86SE5 291 aaKnown RBP11.44□□□□□ -0.58
HDAC7-229ENST00000549883 C7orf61Q8IZ16 206 aa11.44□□□□□ -0.58
HDAC7-229ENST00000549883 RASEFQ8IZ41 740 aa11.44□□□□□ -0.58
HDAC7-229ENST00000549883 MYL10Q9BUA6 226 aa11.44□□□□□ -0.58
HDAC7-229ENST00000549883 LRRC2Q9BYS8 371 aa11.44□□□□□ -0.58
HDAC7-229ENST00000549883 SENP6Q9GZR1 1112 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-229ENST00000549883 PDGFCQ9NRA1 345 aa11.44□□□□□ -0.58
HDAC7-229ENST00000549883 ZHX1Q9UKY1 873 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-229ENST00000549883 SYNGAP1Q96PV0 1343 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-229ENST00000549883 PALM3A6NDB9 673 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-229ENST00000549883 PRC1O43663 620 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 EVI5O60447 810 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 MSCO60682 206 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 SYN1P17600 705 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 CALML3P27482 149 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 NT5C2P49902 561 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 ATN1P54259 1190 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-229ENST00000549883 ACVR2BQ13705 512 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 WTAPQ15007 396 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 QRICH1Q2TAL8 776 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 CCDC144BQ3MJ40 725 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 ASPRV1Q53RT3 343 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 TMEM67Q5HYA8 995 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 EEPD1Q7L9B9 569 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 RAB11FIP4Q86YS3 637 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 FERMT2Q96AC1 680 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 LY9Q9HBG7 655 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 ZMYND8Q9ULU4 1186 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-229ENST00000549883 COLQQ9Y215 455 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-229ENST00000549883 CNPY2Q9Y2B0 182 aa11.43□□□□□ -0.58
HDAC7-229ENST00000549883 WDR19Q8NEZ3 1342 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 PTPDC1A2A3K4 754 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 KLRF2D3W0D1 207 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 DNM1LO00429 736 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 CYTH3O43739 400 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 DHX16O60231 1041 aaKnown RBP11.42□□□□□ -0.58
HDAC7-229ENST00000549883 ADAMTS4O75173 837 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 CAPN2P17655 700 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 ADCYAP1R1P41586 468 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 TROAPQ12815 778 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 GRM4Q14833 912 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 ADCK5Q3MIX3 580 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 MSL3Q8N5Y2 521 aaKnown RBP11.42□□□□□ -0.58
HDAC7-229ENST00000549883 TCEANC2Q96MN5 208 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 XPNPEP3Q9NQH7 507 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 COL20A1Q9P218 1284 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 NRBP1Q9UHY1 535 aa11.42□□□□□ -0.58
HDAC7-229ENST00000549883 SYNRGQ9UMZ2 1314 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 DNAH12Q6ZR08 3092 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 SH2B2O14492 632 aaPredicted RBP11.41□□□□□ -0.58
HDAC7-229ENST00000549883 OPLAHO14841 1288 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 CTAGE5O15320 804 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 RARBP10826 455 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 AKR1A1P14550 325 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 RXRAP19793 462 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 ALDH5A1P51649 535 aaPredicted RBP11.41□□□□□ -0.58
HDAC7-229ENST00000549883 RPS6P62753 249 aaKnown RBP11.41□□□□□ -0.58
HDAC7-229ENST00000549883 CHRDL2Q6WN34 429 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 RNF207Q6ZRF8 634 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 FBXO16Q8IX29 292 aaPredicted RBP11.41□□□□□ -0.58
HDAC7-229ENST00000549883 ARRDC4Q8NCT1 418 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 PIBF1Q8WXW3 757 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 MTMR8Q96EF0 704 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 PIGSQ96S52 555 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 ABHD16BQ9H3Z7 469 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 PPP4R2Q9NY27 417 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 FAM184BQ9ULE4 1060 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 TRIOBPQ9H2D6 2365 aa11.41□□□□□ -0.58
HDAC7-229ENST00000549883 ERICH2A1L162 156 aa11.4□□□□□ -0.58
HDAC7-229ENST00000549883 CPA1P15085 419 aa11.4□□□□□ -0.58
HDAC7-229ENST00000549883 TAPT1Q6NXT6 567 aa11.4□□□□□ -0.58
HDAC7-229ENST00000549883 FBXO11Q86XK2 927 aa11.4□□□□□ -0.58
HDAC7-229ENST00000549883 HOMER1Q86YM7 354 aa11.4□□□□□ -0.58
HDAC7-229ENST00000549883 ZNF654Q8IZM8 581 aa11.4□□□□□ -0.58
HDAC7-229ENST00000549883 CMTR1Q8N1G2 835 aaKnown RBP11.4□□□□□ -0.58
HDAC7-229ENST00000549883 MORC4Q8TE76 937 aa11.4□□□□□ -0.58
HDAC7-229ENST00000549883 NUP133Q8WUM0 1156 aa11.4□□□□□ -0.58
HDAC7-229ENST00000549883 NR2E3Q9Y5X4 410 aa11.4□□□□□ -0.58
HDAC7-229ENST00000549883 KIAA1217Q5T5P2 1943 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 ASB14A6NK59 587 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 KBTBD13C9JR72 458 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 PLEKHA8P1O95397 391 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 SMPD1P17405 629 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 MCM5P33992 734 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 RTP1P59025 263 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 BEX3Q00994 111 aa11.39□□□□□ -0.59
HDAC7-229ENST00000549883 EXOSC10Q01780 885 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms