RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 CYTH3O43739 400 aa13.84□□□□□ -0.19
SLC38A1-206ENST00000549049 MOCS3O95396 460 aa13.84□□□□□ -0.19
SLC38A1-206ENST00000549049 CALML3P27482 149 aa13.84□□□□□ -0.19
SLC38A1-206ENST00000549049 LONP1P36776 959 aaKnown RBP13.84□□□□□ -0.19
SLC38A1-206ENST00000549049 TMC4Q7Z404 712 aa13.84□□□□□ -0.19
SLC38A1-206ENST00000549049 GOLGA5Q8TBA6 731 aa13.84□□□□□ -0.19
SLC38A1-206ENST00000549049 SH3RF3Q8TEJ3 882 aaPredicted RBP13.84□□□□□ -0.19
SLC38A1-206ENST00000549049 EHD4Q9H223 541 aa13.84□□□□□ -0.19
SLC38A1-206ENST00000549049 HAUS4Q9H6D7 363 aa13.84□□□□□ -0.19
SLC38A1-206ENST00000549049 PCDHA6Q9UN73 950 aa13.84□□□□□ -0.19
SLC38A1-206ENST00000549049 PCDHA8Q9Y5H6 950 aa13.84□□□□□ -0.19
SLC38A1-206ENST00000549049 AKR1B10O60218 316 aa13.83□□□□□ -0.19
SLC38A1-206ENST00000549049 KIF5AQ12840 1032 aa13.83□□□□□ -0.19
SLC38A1-206ENST00000549049 SPA17Q15506 151 aa13.83□□□□□ -0.19
SLC38A1-206ENST00000549049 SLC35G1Q2M3R5 365 aa13.83□□□□□ -0.19
SLC38A1-206ENST00000549049 C4orf32Q8N8J7 132 aa13.83□□□□□ -0.19
SLC38A1-206ENST00000549049 SMARCC1Q92922 1105 aaPredicted RBP13.83□□□□□ -0.19
SLC38A1-206ENST00000549049 NLRC4Q9NPP4 1024 aa13.83□□□□□ -0.19
SLC38A1-206ENST00000549049 TMEM260Q9NX78 707 aa13.83□□□□□ -0.19
SLC38A1-206ENST00000549049 ITIH6Q6UXX5 1313 aa13.83□□□□□ -0.19
SLC38A1-206ENST00000549049 SLIT2O94813 1529 aa13.83□□□□□ -0.2
SLC38A1-206ENST00000549049 CYLC1P35663 651 aaPredicted RBP13.83□□□□□ -0.2
SLC38A1-206ENST00000549049 GGCXP38435 758 aa13.83□□□□□ -0.2
SLC38A1-206ENST00000549049 USP14P54578 494 aa13.83□□□□□ -0.2
SLC38A1-206ENST00000549049 SND1Q7KZF4 910 aaKnown RBP eCLIP13.83□□□□□ -0.21e-9■■■□□ 16.8
SLC38A1-206ENST00000549049 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.2
SLC38A1-206ENST00000549049 EPHB6O15197 1021 aa13.83□□□□□ -0.2
SLC38A1-206ENST00000549049 RCAN1P53805 252 aa13.83□□□□□ -0.2
SLC38A1-206ENST00000549049 TBC1D9BQ66K14 1250 aa13.83□□□□□ -0.2
SLC38A1-206ENST00000549049 NBPF5PQ86XG9 351 aaPredicted RBP13.83□□□□□ -0.2
SLC38A1-206ENST00000549049 COG1Q8WTW3 980 aa13.83□□□□□ -0.2
SLC38A1-206ENST00000549049 DUSP9Q99956 384 aaKnown RBP13.83□□□□□ -0.2
SLC38A1-206ENST00000549049 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.83□□□□□ -0.2
SLC38A1-206ENST00000549049 KLRF2D3W0D1 207 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 TRIM14Q14142 442 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 TDRD12Q587J7 1177 aaKnown RBP13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 RRAGAQ7L523 313 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 TRAPPC11Q7Z392 1133 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 HNRNPLLQ8WVV9 542 aaKnown RBP13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 ZHX3Q9H4I2 956 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 ZNF652Q9Y2D9 606 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 FRMPD2Q68DX3 1309 aaPredicted RBP13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 KLRC4O43908 158 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 DNM2P50570 870 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 KRT83P78385 493 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 TTI2Q6NXR4 508 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 NFRKBQ6P4R8 1299 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 PTF1AQ7RTS3 328 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 CLEC10AQ8IUN9 316 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 GLIS3Q8NEA6 775 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 RASSF4Q9H2L5 321 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 ACBD3Q9H3P7 528 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 BSDC1Q9NW68 430 aaPredicted RBP13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 CAPN6Q9Y6Q1 641 aa13.82□□□□□ -0.2
SLC38A1-206ENST00000549049 SMCO2A6NFE2 343 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 MARCH6O60337 910 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 CACNB1Q02641 598 aaPredicted RBP13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 MARCH10Q8NA82 808 aaPredicted RBP13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 P2RX5Q93086 422 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 CCDC47Q96A33 483 aaKnown RBP13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 MTA3Q9BTC8 594 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 CAPN11Q9UMQ6 739 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 SRCAPQ6ZRS2 3230 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 APBA1Q02410 837 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 CCDC181Q5TID7 509 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 AFAP1L1Q8TED9 768 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 SECISBP2LQ93073 1101 aaKnown RBP13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 NLRP3Q96P20 1036 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 DMGDHQ9UI17 866 aaKnown RBP13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 NID2Q14112 1375 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 ZNF804BA4D1E1 1349 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 TULP2O00295 520 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 CERS3Q8IU89 383 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 COA7Q96BR5 231 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 CDK5RAP3Q96JB5 506 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 TMEM47Q9BQJ4 181 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 LRRC1Q9BTT6 524 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 IFIH1Q9BYX4 1025 aaKnown RBP13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 ECM29Q5VYK3 1845 aa13.81□□□□□ -0.2
SLC38A1-206ENST00000549049 RASSF10A6NK89 507 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 ZNF263O14978 683 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 EIF4A3P38919 411 aaKnown RBP13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 CT47A1Q5JQC4 288 aaPredicted RBP13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 SOGA3Q5TF21 947 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 DNAAF5Q86Y56 855 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 FAM71BQ8TC56 605 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 ZNF507Q8TCN5 953 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 SELENOOQ9BVL4 669 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 TAF1P21675 1872 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 ESYT3A0FGR9 886 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 POTEMA6NI47 508 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 ARL6IP4Q66PJ3 421 aaKnown RBP13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 LRRC31Q6UY01 552 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 SRLQ86TD4 932 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 POTEDQ86YR6 584 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 PROCA1Q8NCQ7 364 aaPredicted RBP13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 TBCKQ8TEA7 893 aa13.8□□□□□ -0.2
SLC38A1-206ENST00000549049 MS4A14Q96JA4 679 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms