RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 LIG3P49916 1009 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 TTI2Q6NXR4 508 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 KRT26Q7Z3Y9 468 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 IQCA1Q86XH1 822 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 CREG2Q8IUH2 290 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 SECISBP2LQ93073 1101 aaKnown RBP15.33■□□□□ 0.04
HDAC7-228ENST00000548938 PLIN2Q99541 437 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 TUBGCP2Q9BSJ2 902 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 LRWD1Q9UFC0 647 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 MYH14Q7Z406 1995 aaKnown RBP15.33■□□□□ 0.04
HDAC7-228ENST00000548938 ANKRD36CQ5JPF3 1778 aa15.33■□□□□ 0.04
HDAC7-228ENST00000548938 PSMA7O14818 248 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 NMT2O60551 498 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 GUCY2CP25092 1073 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 KCNQ4P56696 695 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 EVX2Q03828 476 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 PPFIA1Q13136 1202 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 TTC19Q6DKK2 380 aaPredicted RBP15.32■□□□□ 0.04
HDAC7-228ENST00000548938 C4orf32Q8N8J7 132 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 RASSF8Q8NHQ8 419 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 KAT2BQ92831 832 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 LRRC1Q9BTT6 524 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 SNX12Q9UMY4 172 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 CAPN6Q9Y6Q1 641 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 FAM205AQ6ZU69 1335 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 NUP98P52948 1817 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 CAMTA2O94983 1202 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 PLEKP08567 350 aaPredicted RBP15.32■□□□□ 0.04
HDAC7-228ENST00000548938 CALM1P0DP23 149 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 CALM2P0DP24 149 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 CALM3P0DP25 149 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 BRD2P25440 801 aaKnown RBP15.32■□□□□ 0.04
HDAC7-228ENST00000548938 FAM182BQ5T319 152 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 IQCEQ6IPM2 695 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 BCAS4Q8TDM0 211 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 DUSP9Q99956 384 aaKnown RBP15.32■□□□□ 0.04
HDAC7-228ENST00000548938 CAPS2Q9BXY5 557 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 FAM169AQ9Y6X4 670 aa15.32■□□□□ 0.04
HDAC7-228ENST00000548938 DDAH1O94760 285 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 VAV2P52735 878 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 DYNLL1P63167 89 aaKnown RBP15.31■□□□□ 0.04
HDAC7-228ENST00000548938 GNGT1P63211 74 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 ZBED6P86452 979 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 TBC1D8BQ0IIM8 1120 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 KIF5AQ12840 1032 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 ARL6IP4Q66PJ3 421 aaKnown RBP15.31■□□□□ 0.04
HDAC7-228ENST00000548938 CCDC170Q8IYT3 715 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 CSGALNACT2Q8N6G5 542 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 RASGRP4Q8TDF6 673 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 PCMTD1Q96MG8 357 aaPredicted RBP15.31■□□□□ 0.04
HDAC7-228ENST00000548938 SMARCAL1Q9NZC9 954 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 EBAG9O00559 213 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 NKRFO15226 690 aaKnown RBP eCLIP15.31■□□□□ 0.04
HDAC7-228ENST00000548938 SLC7A5Q01650 507 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 CCDC96Q2M329 555 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 CCDC70Q6NSX1 233 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 AMOTL1Q8IY63 956 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 MMGT1Q8N4V1 131 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 LRRC15Q8TF66 581 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 PSMB7Q99436 277 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 RIOK1Q9BRS2 568 aaKnown RBP15.31■□□□□ 0.04
HDAC7-228ENST00000548938 MLXIPQ9HAP2 919 aa15.31■□□□□ 0.04
HDAC7-228ENST00000548938 BAZ2AQ9UIF9 1905 aaKnown RBP15.31■□□□□ 0.04
HDAC7-228ENST00000548938 CICQ96RK0 1608 aaPredicted RBP15.31■□□□□ 0.04
HDAC7-228ENST00000548938 EIF3HO15372 352 aaKnown RBP eCLIP15.3■□□□□ 0.04
HDAC7-228ENST00000548938 ERLIN2O94905 339 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 MATR3P43243 847 aaKnown RBP eCLIP15.3■□□□□ 0.04
HDAC7-228ENST00000548938 KCNB1Q14721 858 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 MEX3CQ5U5Q3 659 aaKnown RBP15.3■□□□□ 0.04
HDAC7-228ENST00000548938 SUSD4Q5VX71 490 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 TSEN2Q8NCE0 465 aaKnown RBP15.3■□□□□ 0.04
HDAC7-228ENST00000548938 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 GIMAP8Q8ND71 665 aaPredicted RBP15.3■□□□□ 0.04
HDAC7-228ENST00000548938 FAM107BQ9H098 131 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 EHD2Q9NZN4 543 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 PFKFB3Q16875 520 aaPredicted RBP15.3■□□□□ 0.04
HDAC7-228ENST00000548938 MMS22LQ6ZRQ5 1243 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 GPIHBP1Q8IV16 184 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 CNOT6LQ96LI5 555 aaKnown RBP15.3■□□□□ 0.04
HDAC7-228ENST00000548938 SH3GL2Q99962 352 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 YY1AP1Q9H869 796 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 RHOBTB3O94955 611 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 ANKRD18AQ8IVF6 992 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 SPATA4Q8NEY3 305 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 NUP58Q9BVL2 599 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 TMEM60Q9H2L4 133 aa15.3■□□□□ 0.04
HDAC7-228ENST00000548938 MOCS3O95396 460 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 CXCR5P32302 372 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 NFRKBQ6P4R8 1299 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 RETREG2Q8NC44 543 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 TRIM58Q8NG06 486 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 GPKOWQ92917 476 aaPredicted RBP eCLIP15.29■□□□□ 0.04
HDAC7-228ENST00000548938 ARL8AQ96BM9 186 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 GJD4Q96KN9 370 aaPredicted RBP15.29■□□□□ 0.04
HDAC7-228ENST00000548938 CCDC42Q96M95 316 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 DEF6Q9H4E7 631 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 RREB1Q92766 1687 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 GOLGA8KD6RF30 607 aa15.29■□□□□ 0.04
HDAC7-228ENST00000548938 MTIF2P46199 727 aaKnown RBP15.29■□□□□ 0.04
HDAC7-228ENST00000548938 SPA17Q15506 151 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms