RNA–Protein interactions for RNA: ENST00000548824.5

RACGAP1-215, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 586 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-215ENST00000548824 ASGR1P07306 291 aa13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 SMAD3P84022 425 aaKnown RBP13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 TRAF1Q13077 416 aa13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 PPIGQ13427 754 aaKnown RBP eCLIP13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 IMMTQ16891 758 aaKnown RBP13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 SYDE2Q5VT97 1194 aa13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 NSMFQ6X4W1 530 aa13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 FAM133AQ8N9E0 248 aa13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 RUFY2Q8WXA3 655 aa13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 YTHDC1Q96MU7 727 aaKnown RBP13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 KRT23Q9C075 422 aa13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 UPF3AQ9H1J1 476 aaKnown RBP13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 VTA1Q9NP79 307 aa13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 GPHNQ9NQX3 736 aaPredicted RBP13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 MTMR10Q9NXD2 777 aa13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 CYP39A1Q9NYL5 469 aa13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 RAD50Q92878 1312 aa13.27□□□□□ -0.29
RACGAP1-215ENST00000548824 TMEM265A0A087WTH1 108 aa13.26□□□□□ -0.29
RACGAP1-215ENST00000548824 ARVCFO00192 962 aa13.26□□□□□ -0.29
RACGAP1-215ENST00000548824 TIMP1P01033 207 aa13.26□□□□□ -0.29
RACGAP1-215ENST00000548824 NKX3-2P78367 333 aa13.26□□□□□ -0.29
RACGAP1-215ENST00000548824 NUCB1Q02818 461 aa13.26□□□□□ -0.29
RACGAP1-215ENST00000548824 NMIQ13287 307 aaPredicted RBP13.26□□□□□ -0.29
RACGAP1-215ENST00000548824 VPS53Q5VIR6 699 aa13.26□□□□□ -0.29
RACGAP1-215ENST00000548824 FAM227BQ96M60 508 aa13.26□□□□□ -0.29
RACGAP1-215ENST00000548824 TMEM47Q9BQJ4 181 aa13.26□□□□□ -0.29
RACGAP1-215ENST00000548824 RANBP17Q9H2T7 1088 aaKnown RBP13.26□□□□□ -0.29
RACGAP1-215ENST00000548824 KAT14Q9H8E8 782 aa13.26□□□□□ -0.29
RACGAP1-215ENST00000548824 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 PTPDC1A2A3K4 754 aa13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 NKRFO15226 690 aaKnown RBP eCLIP13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 KPNA6O60684 536 aa13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 SUPT20HL2P0C7V6 817 aa13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 CNTN2Q02246 1040 aa13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 TRDNQ13061 729 aa13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 SHHQ15465 462 aa13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 KIAA1211Q6ZU35 1233 aa13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 MCF2L2Q86YR7 1114 aa13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 DNERQ8NFT8 737 aa13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 RNPC3Q96LT9 517 aaKnown RBP13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 POLR3EQ9NVU0 708 aa13.25□□□□□ -0.29
RACGAP1-215ENST00000548824 ZNF536O15090 1300 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 A0A0D9SFI3 127 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 TRIM43BA6NCK2 446 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 DYNC1LI2O43237 492 aaPredicted RBP13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 NMT2O60551 498 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 CPT1AP50416 773 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 PDE4DQ08499 809 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 FAAP100Q0VG06 881 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 FSCN1Q16658 493 aaKnown RBP13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 CCSAPQ6IQ19 270 aaPredicted RBP13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 MFSD5Q6N075 450 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 CWC27Q6UX04 472 aaKnown RBP13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 RNF207Q6ZRF8 634 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 TLK2Q86UE8 772 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 PLEKHM2Q8IWE5 1019 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 RPUSD2Q8IZ73 545 aaKnown RBP13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 RGS22Q8NE09 1264 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 TRIM43Q96BQ3 446 aaPredicted RBP13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 CHMP4CQ96CF2 233 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 UBAC1Q9BSL1 405 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 DSCC1Q9BVC3 393 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 GPCPD1Q9NPB8 672 aa13.24□□□□□ -0.29
RACGAP1-215ENST00000548824 MCM3APO60318 1980 aa13.23□□□□□ -0.29
RACGAP1-215ENST00000548824 WDR19Q8NEZ3 1342 aa13.23□□□□□ -0.29
RACGAP1-215ENST00000548824 ERICH2A1L162 156 aa13.23□□□□□ -0.29
RACGAP1-215ENST00000548824 SOWAHBA6NEL2 793 aa13.23□□□□□ -0.29
RACGAP1-215ENST00000548824 PDHBP11177 359 aa13.23□□□□□ -0.29
RACGAP1-215ENST00000548824 CDK7P50613 346 aa13.23□□□□□ -0.29
RACGAP1-215ENST00000548824 HAND2P61296 217 aa13.23□□□□□ -0.29
RACGAP1-215ENST00000548824 ZNF543Q08ER8 600 aa13.23□□□□□ -0.29
RACGAP1-215ENST00000548824 INCENPQ9NQS7 918 aa13.23□□□□□ -0.29
RACGAP1-215ENST00000548824 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
RACGAP1-215ENST00000548824 DHX16O60231 1041 aaKnown RBP13.22□□□□□ -0.29
RACGAP1-215ENST00000548824 SLC16A2P36021 539 aa13.22□□□□□ -0.29
RACGAP1-215ENST00000548824 ITGA7Q13683 1181 aa13.22□□□□□ -0.29
RACGAP1-215ENST00000548824 BAATQ14032 418 aaPredicted RBP13.22□□□□□ -0.29
RACGAP1-215ENST00000548824 DUSP28Q4G0W2 176 aa13.22□□□□□ -0.29
RACGAP1-215ENST00000548824 ASPRV1Q53RT3 343 aa13.22□□□□□ -0.29
RACGAP1-215ENST00000548824 PSRC1Q6PGN9 363 aaPredicted RBP13.22□□□□□ -0.29
RACGAP1-215ENST00000548824 SH3RF1Q7Z6J0 888 aa13.22□□□□□ -0.29
RACGAP1-215ENST00000548824 MORC4Q8TE76 937 aa13.22□□□□□ -0.29
RACGAP1-215ENST00000548824 WDR11Q9BZH6 1224 aa13.22□□□□□ -0.29
RACGAP1-215ENST00000548824 GNEQ9Y223 722 aaKnown RBP13.22□□□□□ -0.29
RACGAP1-215ENST00000548824 ABCB11O95342 1321 aa13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 FRMPD2Q68DX3 1309 aaPredicted RBP13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 LTBP2Q14767 1821 aa13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 FOXP2O15409 715 aa13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 CALML3P27482 149 aa13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 ALDH5A1P51649 535 aaPredicted RBP13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 SART3Q15020 963 aaKnown RBP13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 MUM1L1Q5H9M0 696 aa13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 Q7L0L9 218 aa13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 ZNF589Q86UQ0 364 aaPredicted RBP13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 SAMD3Q8N6K7 520 aa13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 PNMA1Q8ND90 353 aa13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 SCFD2Q8WU76 684 aa13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 ANKS1AQ92625 1134 aa13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 ZSCAN10Q96SZ4 725 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms