RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CEP290O15078 2479 aa18.41■□□□□ 0.54
DDX54-205ENST00000548786 KLRF2D3W0D1 207 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 MSCO60682 206 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 ZNF865P0CJ78 1059 aaPredicted RBP18.4■□□□□ 0.54
DDX54-205ENST00000548786 CALML3P27482 149 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 BAATQ14032 418 aaPredicted RBP18.4■□□□□ 0.54
DDX54-205ENST00000548786 QRICH1Q2TAL8 776 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 NFXL1Q6ZNB6 911 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 ARMCX2Q7L311 632 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 CATIPQ7Z7H3 387 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 RAB11FIP4Q86YS3 637 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 CLEC4DQ8WXI8 215 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 JMJD4Q9H9V9 463 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 LY9Q9HBG7 655 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.4■□□□□ 0.54
DDX54-205ENST00000548786 ASTN1O14525 1302 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 SYNGAP1Q96PV0 1343 aa18.4■□□□□ 0.54
DDX54-205ENST00000548786 H0YGN5 161 aa18.39■□□□□ 0.53
DDX54-205ENST00000548786 MCM5P33992 734 aa18.39■□□□□ 0.53
DDX54-205ENST00000548786 GRM4Q14833 912 aa18.39■□□□□ 0.53
DDX54-205ENST00000548786 RNF20Q5VTR2 975 aa18.39■□□□□ 0.53
DDX54-205ENST00000548786 HOMER1Q86YM7 354 aa18.39■□□□□ 0.53
DDX54-205ENST00000548786 RASEFQ8IZ41 740 aa18.39■□□□□ 0.53
DDX54-205ENST00000548786 PIBF1Q8WXW3 757 aa18.39■□□□□ 0.53
DDX54-205ENST00000548786 TCEANC2Q96MN5 208 aa18.39■□□□□ 0.53
DDX54-205ENST00000548786 LCTP09848 1927 aa18.39■□□□□ 0.53
DDX54-205ENST00000548786 DNAH12Q6ZR08 3092 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 SH2B2O14492 632 aaPredicted RBP18.38■□□□□ 0.53
DDX54-205ENST00000548786 EVI5O60447 810 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 PGK1P00558 417 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 RARBP10826 455 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 RXRAP19793 462 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 ACVR2BQ13705 512 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 ERICH6BQ5W0A0 696 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 MAMDC4Q6UXC1 1216 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 EEPD1Q7L9B9 569 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 ZNF467Q7Z7K2 595 aaPredicted RBP18.38■□□□□ 0.53
DDX54-205ENST00000548786 MSL3Q8N5Y2 521 aaKnown RBP18.38■□□□□ 0.53
DDX54-205ENST00000548786 XPNPEP3Q9NQH7 507 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 PCDH10Q9P2E7 1040 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 ALPK3Q96L96 1907 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 WDR19Q8NEZ3 1342 aa18.38■□□□□ 0.53
DDX54-205ENST00000548786 PALM3A6NDB9 673 aaPredicted RBP18.37■□□□□ 0.53
DDX54-205ENST00000548786 CCDC69A6NI79 296 aa18.37■□□□□ 0.53
DDX54-205ENST00000548786 AKR1A1P14550 325 aa18.37■□□□□ 0.53
DDX54-205ENST00000548786 CAPN2P17655 700 aa18.37■□□□□ 0.53
DDX54-205ENST00000548786 TROAPQ12815 778 aa18.37■□□□□ 0.53
DDX54-205ENST00000548786 SLC35G1Q2M3R5 365 aa18.37■□□□□ 0.53
DDX54-205ENST00000548786 ADCK5Q3MIX3 580 aa18.37■□□□□ 0.53
DDX54-205ENST00000548786 RNF207Q6ZRF8 634 aa18.37■□□□□ 0.53
DDX54-205ENST00000548786 FBXO11Q86XK2 927 aa18.37■□□□□ 0.53
DDX54-205ENST00000548786 C7orf61Q8IZ16 206 aa18.37■□□□□ 0.53
DDX54-205ENST00000548786 ZNF654Q8IZM8 581 aa18.37■□□□□ 0.53
DDX54-205ENST00000548786 SENP6Q9GZR1 1112 aaPredicted RBP18.37■□□□□ 0.53
DDX54-205ENST00000548786 NRBP1Q9UHY1 535 aa18.37■□□□□ 0.53
DDX54-205ENST00000548786 MYH6P13533 1939 aa18.37■□□□□ 0.53
DDX54-205ENST00000548786 KBTBD13C9JR72 458 aa18.36■□□□□ 0.53
DDX54-205ENST00000548786 DNM1LO00429 736 aa18.36■□□□□ 0.53
DDX54-205ENST00000548786 ADCY6O43306 1168 aa18.36■□□□□ 0.53
DDX54-205ENST00000548786 ATN1P54259 1190 aaPredicted RBP18.36■□□□□ 0.53
DDX54-205ENST00000548786 RPS6P62753 249 aaKnown RBP18.36■□□□□ 0.53
DDX54-205ENST00000548786 FBXO16Q8IX29 292 aaPredicted RBP18.36■□□□□ 0.53
DDX54-205ENST00000548786 TBC1D5Q92609 795 aa18.36■□□□□ 0.53
DDX54-205ENST00000548786 FERMT2Q96AC1 680 aa18.36■□□□□ 0.53
DDX54-205ENST00000548786 NEK1Q96PY6 1258 aa18.36■□□□□ 0.53
DDX54-205ENST00000548786 FAM184BQ9ULE4 1060 aa18.36■□□□□ 0.53
DDX54-205ENST00000548786 LRRC37A2A6NM11 1700 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 ABCB11O95342 1321 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 ASB14A6NK59 587 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 PPP1R11O60927 126 aaPredicted RBP18.35■□□□□ 0.53
DDX54-205ENST00000548786 COL6A1P12109 1028 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 CPA1P15085 419 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 PTGS1P23219 599 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 IRX5P78411 483 aaPredicted RBP18.35■□□□□ 0.53
DDX54-205ENST00000548786 LRRC41Q15345 812 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 LRRC26Q2I0M4 334 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 CCDC144BQ3MJ40 725 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 NOL8Q76FK4 1167 aaKnown RBP18.35■□□□□ 0.53
DDX54-205ENST00000548786 ARRDC4Q8NCT1 418 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 TMEM87BQ96K49 555 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 PIGSQ96S52 555 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 ABHD16BQ9H3Z7 469 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 PNMA2Q9UL42 364 aa18.35■□□□□ 0.53
DDX54-205ENST00000548786 BAZ2BQ9UIF8 2168 aaKnown RBP18.34■□□□□ 0.53
DDX54-205ENST00000548786 SYNRGQ9UMZ2 1314 aa18.34■□□□□ 0.53
DDX54-205ENST00000548786 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.34■□□□□ 0.53
DDX54-205ENST00000548786 ADCYAP1R1P41586 468 aa18.34■□□□□ 0.53
DDX54-205ENST00000548786 ALDH5A1P51649 535 aaPredicted RBP18.34■□□□□ 0.53
DDX54-205ENST00000548786 CMTR1Q8N1G2 835 aaKnown RBP18.34■□□□□ 0.53
DDX54-205ENST00000548786 CTCFLQ8NI51 663 aaPredicted RBP18.34■□□□□ 0.53
DDX54-205ENST00000548786 KATNBL1Q9H079 304 aa18.34■□□□□ 0.53
DDX54-205ENST00000548786 ZBTB5O15062 677 aa18.33■□□□□ 0.52
DDX54-205ENST00000548786 CYTH3O43739 400 aa18.33■□□□□ 0.52
DDX54-205ENST00000548786 DDAH1O94760 285 aa18.33■□□□□ 0.52
DDX54-205ENST00000548786 PLEKHA8P1O95397 391 aa18.33■□□□□ 0.52
DDX54-205ENST00000548786 AMNQ9BXJ7 453 aa18.33■□□□□ 0.52
DDX54-205ENST00000548786 PDGFCQ9NRA1 345 aa18.33■□□□□ 0.52
DDX54-205ENST00000548786 ADD3Q9UEY8 706 aaKnown RBP18.33■□□□□ 0.52
DDX54-205ENST00000548786 ZMYND8Q9ULU4 1186 aaPredicted RBP18.33■□□□□ 0.52
DDX54-205ENST00000548786 NR2E3Q9Y5X4 410 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms