RNA–Protein interactions for RNA: ENST00000548473.1

AC007540.1-201, humanhuman

TSL 3 BASIC

Gene AC007540.1, Length 507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007540.1-201ENST00000548473 PNMA2Q9UL42 364 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 SMCHD1A6NHR9 2005 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 PLXNA1Q9UIW2 1896 aa13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 WDR19Q8NEZ3 1342 aa13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 SYNGAP1Q96PV0 1343 aa13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 PTPDC1A2A3K4 754 aa13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 PALM3A6NDB9 673 aaPredicted RBP13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 TROAPQ12815 778 aa13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 GRM4Q14833 912 aa13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 QRICH1Q2TAL8 776 aa13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 ARMCX2Q7L311 632 aa13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 CCDC144CPQ8IYA2 1237 aa13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 NUP133Q8WUM0 1156 aa13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 LRRC2Q9BYS8 371 aa13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 LY9Q9HBG7 655 aa13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 ZHX1Q9UKY1 873 aaPredicted RBP13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 DDX49Q9Y6V7 483 aaKnown RBP13.95□□□□□ -0.18
AC007540.1-201ENST00000548473 SH2B2O14492 632 aaPredicted RBP13.94□□□□□ -0.18
AC007540.1-201ENST00000548473 CALML3P27482 149 aa13.94□□□□□ -0.18
AC007540.1-201ENST00000548473 ACVR2BQ13705 512 aa13.94□□□□□ -0.18
AC007540.1-201ENST00000548473 GJC2Q5T442 439 aaPredicted RBP13.94□□□□□ -0.18
AC007540.1-201ENST00000548473 PRPF38BQ5VTL8 546 aaKnown RBP13.94□□□□□ -0.18
AC007540.1-201ENST00000548473 NFXL1Q6ZNB6 911 aa13.94□□□□□ -0.18
AC007540.1-201ENST00000548473 FBXO11Q86XK2 927 aa13.94□□□□□ -0.18
AC007540.1-201ENST00000548473 ZNF654Q8IZM8 581 aa13.94□□□□□ -0.18
AC007540.1-201ENST00000548473 TMEM87BQ96K49 555 aa13.94□□□□□ -0.18
AC007540.1-201ENST00000548473 NEK1Q96PY6 1258 aa13.94□□□□□ -0.18
AC007540.1-201ENST00000548473 MTA3Q9BTC8 594 aa13.94□□□□□ -0.18
AC007540.1-201ENST00000548473 MYL10Q9BUA6 226 aa13.94□□□□□ -0.18
AC007540.1-201ENST00000548473 ASTN1O14525 1302 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 CCDC69A6NI79 296 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 ASB14A6NK59 587 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 RARBP10826 455 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 AKR1A1P14550 325 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 SLC35G1Q2M3R5 365 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 ADCK5Q3MIX3 580 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 SLC30A10Q6XR72 485 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 RNF207Q6ZRF8 634 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 TMTC2Q8N394 836 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 ARRDC4Q8NCT1 418 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 TBC1D5Q92609 795 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 LENG1Q96BZ8 264 aaPredicted RBP13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 ABHD16BQ9H3Z7 469 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 FAM184BQ9ULE4 1060 aa13.93□□□□□ -0.18
AC007540.1-201ENST00000548473 ABCB11O95342 1321 aa13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 H0YGN5 161 aa13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 EVI5O60447 810 aa13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 PGK1P00558 417 aa13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 COL6A1P12109 1028 aa13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 RPS6P62753 249 aaKnown RBP13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 TSGA10IPQ3SY00 556 aa13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 HOMER1Q86YM7 354 aa13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 RAB11FIP4Q86YS3 637 aa13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 MTMR8Q96EF0 704 aa13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 TCEANC2Q96MN5 208 aa13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 SENP6Q9GZR1 1112 aaPredicted RBP13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 RIOX1Q9H6W3 641 aa13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 XPNPEP3Q9NQH7 507 aa13.92□□□□□ -0.18
AC007540.1-201ENST00000548473 DNM1LO00429 736 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 ZBTB5O15062 677 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 CYTH3O43739 400 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 DDAH1O94760 285 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 REC8O95072 547 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 RXRAP19793 462 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 HSPA4P34932 840 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 LIFRP42702 1097 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 EXOSC10Q01780 885 aaKnown RBP13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 KRT32Q14532 448 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 LRRC41Q15345 812 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 CCDC144BQ3MJ40 725 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 DHX32Q7L7V1 743 aaKnown RBP13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 EEPD1Q7L9B9 569 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 RGS22Q8NE09 1264 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 CTCFLQ8NI51 663 aaPredicted RBP13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 PIBF1Q8WXW3 757 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 PIGSQ96S52 555 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 AMNQ9BXJ7 453 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 KATNBL1Q9H079 304 aa13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 ADD3Q9UEY8 706 aaKnown RBP13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 MRPL11Q9Y3B7 192 aaKnown RBP13.91□□□□□ -0.18
AC007540.1-201ENST00000548473 KBTBD13C9JR72 458 aa13.9□□□□□ -0.18
AC007540.1-201ENST00000548473 PPP1R11O60927 126 aaPredicted RBP13.9□□□□□ -0.18
AC007540.1-201ENST00000548473 ALDH5A1P51649 535 aaPredicted RBP13.9□□□□□ -0.18
AC007540.1-201ENST00000548473 KCNB2Q92953 911 aa13.9□□□□□ -0.18
AC007540.1-201ENST00000548473 MAP3K14Q99558 947 aa13.9□□□□□ -0.18
AC007540.1-201ENST00000548473 SNX14Q9Y5W7 946 aa13.9□□□□□ -0.18
AC007540.1-201ENST00000548473 NR2E3Q9Y5X4 410 aa13.9□□□□□ -0.18
AC007540.1-201ENST00000548473 SLC12A7Q9Y666 1083 aa13.9□□□□□ -0.18
AC007540.1-201ENST00000548473 MCM3APO60318 1980 aa13.89□□□□□ -0.19
AC007540.1-201ENST00000548473 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.89□□□□□ -0.19
AC007540.1-201ENST00000548473 ADCY6O43306 1168 aa13.89□□□□□ -0.19
AC007540.1-201ENST00000548473 DUSP11O75319 330 aaKnown RBP13.89□□□□□ -0.19
AC007540.1-201ENST00000548473 PLEKHA8P1O95397 391 aa13.89□□□□□ -0.19
AC007540.1-201ENST00000548473 CPA1P15085 419 aa13.89□□□□□ -0.19
AC007540.1-201ENST00000548473 KIF5BP33176 963 aa13.89□□□□□ -0.19
AC007540.1-201ENST00000548473 ADCYAP1R1P41586 468 aa13.89□□□□□ -0.19
AC007540.1-201ENST00000548473 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
AC007540.1-201ENST00000548473 LRRC26Q2I0M4 334 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms