RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 AMNQ9BXJ7 453 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 HOMER2Q9NSB8 354 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 FAM217BQ9NTX9 383 aaPredicted RBP13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 SEC63Q9UGP8 760 aaKnown RBP13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 GABRQQ9UN88 632 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 CENPFP49454 3210 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 PFASO15067 1338 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 XRCC5P13010 732 aaKnown RBP13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 ADORA2AP29274 412 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 CDC27P30260 824 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 MAP2K5Q13163 448 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 KCTD2Q14681 263 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 USH1GQ495M9 461 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 CMTR1Q8N1G2 835 aaKnown RBP13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 RAET1EQ8TD07 263 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 PIGSQ96S52 555 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 APBA2Q99767 749 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 MAF1Q9H063 256 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 SLC5A4Q9NY91 659 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 PTCH2Q9Y6C5 1203 aa13.18□□□□□ -0.3
CALCOCO1-208ENST00000547988 ST18O60284 1047 aa13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 HOXC6P09630 235 aa13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 ADD1P35611 737 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 CCT2P78371 535 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 FUT2Q10981 343 aa13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 MUM1L1Q5H9M0 696 aa13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 COL13A1Q5TAT6 717 aaPredicted RBP13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 DPP9Q86TI2 863 aa13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 TRMT44Q8IYL2 757 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 ANKRD35Q8N283 1001 aa13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 SLAIN1Q8ND83 568 aa13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 LARP6Q9BRS8 491 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 MCOLN1Q9GZU1 580 aa13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 RBM27Q9P2N5 1060 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 MRPL11Q9Y3B7 192 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-208ENST00000547988 DNAJC25-GNG10A0A024R161 153 aa13.16□□□□□ -0.3
CALCOCO1-208ENST00000547988 PFKFB2O60825 505 aa13.16□□□□□ -0.3
CALCOCO1-208ENST00000547988 PPP1R11O60927 126 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO1-208ENST00000547988 CYP2B6P20813 491 aa13.16□□□□□ -0.3
CALCOCO1-208ENST00000547988 CPLX2Q6PUV4 134 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-208ENST00000547988 CCDC82Q8N4S0 544 aa13.16□□□□□ -0.3
CALCOCO1-208ENST00000547988 RGS22Q8NE09 1264 aa13.16□□□□□ -0.3
CALCOCO1-208ENST00000547988 CLEC4DQ8WXI8 215 aa13.16□□□□□ -0.3
CALCOCO1-208ENST00000547988 DDX11Q96FC9 970 aa13.16□□□□□ -0.3
CALCOCO1-208ENST00000547988 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-208ENST00000547988 DIS3Q9Y2L1 958 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-208ENST00000547988 PCDHA1Q9Y5I3 950 aa13.16□□□□□ -0.3
CALCOCO1-208ENST00000547988 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 NFIBO00712 420 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 CPLX1O14810 134 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 ADCY3O60266 1144 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 IFNAR1P17181 557 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 TAL1P17542 331 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 GRK4P32298 578 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 STK3Q13188 491 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 NTRK3Q16288 839 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 SLC9C1Q4G0N8 1177 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 NOL8Q76FK4 1167 aaKnown RBP13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 MCF2L2Q86YR7 1114 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 SAMD3Q8N6K7 520 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 PIBF1Q8WXW3 757 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 RNF26Q9BY78 433 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 NCOA5Q9HCD5 579 aaKnown RBP13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 CYP39A1Q9NYL5 469 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 LIMCH1Q9UPQ0 1083 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 MYH7BA7E2Y1 1941 aa13.15□□□□□ -0.3
CALCOCO1-208ENST00000547988 PRPF3O43395 683 aaKnown RBP13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 COBLO75128 1261 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 CDKL5O76039 1030 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 HMGCRP04035 888 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 PGK2P07205 417 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 GHRHRQ02643 423 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 SCRN1Q12765 414 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 ME3Q16798 604 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 ZNF792Q3KQV3 632 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 NSMFQ6X4W1 530 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 RNF207Q6ZRF8 634 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 NPLOC4Q8TAT6 608 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 GTF3C6Q969F1 213 aa13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 ZSCAN31Q96LW9 406 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 MAP3K20Q9NYL2 800 aaKnown RBP13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 V9GY48 417 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO1-208ENST00000547988 PTPDC1A2A3K4 754 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 LARGE1O95461 756 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 ELNP15502 786 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 MCM2P49736 904 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 AKAP17AQ02040 695 aaKnown RBP13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 PFKFB3Q16875 520 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 OLFML2BQ68BL8 750 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 PPP1R18Q6NYC8 613 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 HEATR3Q7Z4Q2 680 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 MSL3Q8N5Y2 521 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms