RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CHST13Q8NET6 341 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 AGBL1Q96MI9 1066 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 PRKAG2Q9UGJ0 569 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 NRBP1Q9UHY1 535 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 ANAPC4Q9UJX5 808 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 SYNPO2Q9UMS6 1093 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.93□□□□□ -1.14
SCAF11-211ENST00000547950 TACC3Q9Y6A5 838 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 DDX60LQ5H9U9 1706 aaKnown RBP7.92□□□□□ -1.14
SCAF11-211ENST00000547950 NAV1Q8NEY1 1877 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 DNAJC25-GNG10A0A024R161 153 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 SNAI1O95863 264 aaPredicted RBP7.92□□□□□ -1.14
SCAF11-211ENST00000547950 ALAS1P13196 640 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 SDSP20132 328 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 OAZ1P54368 228 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 NUCB1Q02818 461 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 CCDC96Q2M329 555 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 TRIM60Q495X7 471 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 RNF180Q86T96 592 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 ZNF589Q86UQ0 364 aaPredicted RBP7.92□□□□□ -1.14
SCAF11-211ENST00000547950 FAM160B2Q86V87 743 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 PLEKHM2Q8IWE5 1019 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 LENG1Q96BZ8 264 aaPredicted RBP7.92□□□□□ -1.14
SCAF11-211ENST00000547950 GMCL1Q96IK5 515 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 ZBED2Q9BTP6 218 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 PRDM5Q9NQX1 630 aaPredicted RBP7.92□□□□□ -1.14
SCAF11-211ENST00000547950 FBXO40Q9UH90 709 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 ZHX1Q9UKY1 873 aaPredicted RBP7.92□□□□□ -1.14
SCAF11-211ENST00000547950 FAM184BQ9ULE4 1060 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 SUPT16HQ9Y5B9 1047 aaKnown RBP7.92□□□□□ -1.14
SCAF11-211ENST00000547950 PLXNB2O15031 1838 aa7.92□□□□□ -1.14
SCAF11-211ENST00000547950 DOCK3Q8IZD9 2030 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 CEP290O15078 2479 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 ORC4O43929 436 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 FGRP09769 529 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 FDX1P10109 184 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 AKR1A1P14550 325 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 SLC16A2P36021 539 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 CNTN2Q02246 1040 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 TLE2Q04725 743 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 ACVR2BQ13705 512 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 TTBK2Q6IQ55 1244 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 CWC27Q6UX04 472 aaKnown RBP7.91□□□□□ -1.14
SCAF11-211ENST00000547950 MAMDC4Q6UXC1 1216 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 MFSD6Q6ZSS7 791 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 RASGRP2Q7LDG7 609 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 TDHQ8IZJ6 230 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 MSL3Q8N5Y2 521 aaKnown RBP7.91□□□□□ -1.14
SCAF11-211ENST00000547950 BBXQ8WY36 941 aaPredicted RBP7.91□□□□□ -1.14
SCAF11-211ENST00000547950 VTI1AQ96AJ9 217 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 TRERF1Q96PN7 1200 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 TMEM47Q9BQJ4 181 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 SLC4A5Q9BY07 1137 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 ACAD9Q9H845 621 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 GPCPD1Q9NPB8 672 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 RNF146Q9NTX7 359 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.91□□□□□ -1.14
SCAF11-211ENST00000547950 PRR12Q9ULL5 1215 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 PHF24Q9UPV7 400 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 PCDHGA10Q9Y5H3 936 aa7.91□□□□□ -1.14
SCAF11-211ENST00000547950 FRMPD2Q68DX3 1309 aaPredicted RBP7.91□□□□□ -1.14
SCAF11-211ENST00000547950 PLIN4Q96Q06 1357 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 ZNF536O15090 1300 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 CCDC171Q6TFL3 1326 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 SYNGAP1Q96PV0 1343 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 ZNF213O14771 459 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 TOP1P11387 765 aaKnown RBP7.9□□□□□ -1.14
SCAF11-211ENST00000547950 ACLYP53396 1101 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 MFAP1P55081 439 aaKnown RBP7.9□□□□□ -1.14
SCAF11-211ENST00000547950 IRX6P78412 446 aaPredicted RBP7.9□□□□□ -1.14
SCAF11-211ENST00000547950 KCNA10Q16322 511 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 CCDC144BQ3MJ40 725 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 MUM1L1Q5H9M0 696 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 AKNAD1Q5T1N1 836 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 NOL8Q76FK4 1167 aaKnown RBP7.9□□□□□ -1.14
SCAF11-211ENST00000547950 ARMCX2Q7L311 632 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 SH3RF1Q7Z6J0 888 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 TICAM2Q86XR7 235 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 CCDC144CPQ8IYA2 1237 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 DCAF4Q8WV16 495 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 BADQ92934 168 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 ZKSCAN3Q9BRR0 538 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 ABHD16BQ9H3Z7 469 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 OSBPL3Q9H4L5 887 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 DIAPH3Q9NSV4 1193 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 CCPG1Q9ULG6 757 aa7.9□□□□□ -1.14
SCAF11-211ENST00000547950 TRIOBPQ9H2D6 2365 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 A0A1W2PQ45 241 aaPredicted RBP7.89□□□□□ -1.15
SCAF11-211ENST00000547950 A0A1W2PQY0 241 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 TRIM43BA6NCK2 446 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 SOWAHBA6NEL2 793 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 DPYSL4O14531 572 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 PLA2G6O60733 806 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 PQBP1O60828 265 aaKnown RBP7.89□□□□□ -1.15
SCAF11-211ENST00000547950 ADAMTS4O75173 837 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 DUSP11O75319 330 aaKnown RBP7.89□□□□□ -1.15
SCAF11-211ENST00000547950 C6orf222P0C671 652 aaPredicted RBP7.89□□□□□ -1.15
SCAF11-211ENST00000547950 NOVP48745 357 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 SNX17Q15036 470 aa7.89□□□□□ -1.15
SCAF11-211ENST00000547950 TKFCQ3LXA3 575 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms